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[ANN] - EchoBase 4.0.15 released
by codelutin.com Release Notification March 26, 2018

March 26, 2018

The EchoBase team is pleased to announce the echobase-4.0.15 release! The French Institute for the Exploitation of the Sea (Ifremer) has designed an open software suite for storing fisheries acoustic data and computing acoustic indicators for survey-based ecosystem monitoring. It comprises a postgreSQL database designed to store acoustic, navigation and fishing data from ecosystemic surveys (EchoBase) and a suite of R codes (EchoR) for computing fish population indicators based on Echobase data. Documentation of the project can be found here: http://echobase.codelutin.com Changes ------- Changes in this version include: Fixed Bugs: o Erreur durant l'export CIEM des données 2015 Issue: 9780. Thanks to Mathieu Doray. Resolved by jcouteau. Downloads --------- For a manual installation, you can download files here: https://forge.codelutin.com/projects/echobase/files * echobase-embedded-4.0.15.zip - https://forge.codelutin.com/attachments/download/5131 * echobase-referentiel-4.0.15.echobase - https://forge.codelutin.com/attachments/download/5132 * echobase-ui-4.0.15-full.war - https://forge.codelutin.com/attachments/download/5133 * echobase-ui-4.0.15-lizmap.zip - https://forge.codelutin.com/attachments/download/5134 Maven artifacts --------------- Artifacts are deployed in nuiton maven repository https://nexus.nuiton.org/nexus/content/repositories/other-releases/ Have fun! -EchoBase team

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branch release/4.0.15 created (now fec77252)
by codelutin.com scm March 26, 2018

March 26, 2018

This is an automated email from the git hooks/post-receive script. New change to branch release/4.0.15 in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git at fec77252 Merge remote-tracking branch 'origin/develop' into develop No new revisions were added by this update. -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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branch develop updated (fec77252 -> 20d36a60)
by codelutin.com scm March 26, 2018

March 26, 2018

This is an automated email from the git hooks/post-receive script. New change to branch develop in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git from fec77252 Merge remote-tracking branch 'origin/develop' into develop new 20d36a60 [jgitflow-maven-plugin]updating poms for 4.0.16-SNAPSHOT development The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Detailed log of new commits: commit 20d36a60b52eba583a196554b073a8f613406e7b Author: Maven Release <maven-release(a)codelutin.com> Date: Mon Mar 26 17:18:44 2018 +0200 [jgitflow-maven-plugin]updating poms for 4.0.16-SNAPSHOT development Summary of changes: echobase-domain/pom.xml | 2 +- echobase-services/pom.xml | 2 +- echobase-ui/pom.xml | 2 +- pom.xml | 2 +- 4 files changed, 4 insertions(+), 4 deletions(-) -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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branch develop updated (52a37f0c -> fec77252)
by codelutin.com scm March 26, 2018

March 26, 2018

This is an automated email from the git hooks/post-receive script. New change to branch develop in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git from 52a37f0c [jgitflow-maven-plugin]Updating develop poms back to pre merge state new 9914fabb fixes #9780 : Erreur durant l'export CIEM des données 2015 new fec77252 Merge remote-tracking branch 'origin/develop' into develop The 2 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Detailed log of new commits: commit fec77252bd3c63a22e7c347199d686ed74d7de84 Merge: 9914fabb 52a37f0c Author: Jean Couteau <jean.couteau(a)gmail.com> Date: Mon Mar 26 17:13:57 2018 +0200 Merge remote-tracking branch 'origin/develop' into develop commit 9914fabbd73d846af6a7c7cd14076b513cb0dcca Author: Jean Couteau <jean.couteau(a)gmail.com> Date: Mon Mar 26 17:13:24 2018 +0200 fixes #9780 : Erreur durant l'export CIEM des données 2015 Summary of changes: .../echobase/services/service/atlantos/xml/XmlBioticExport.java | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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annotated tag echobase-4.0.14 created (now af4136b2)
by codelutin.com scm March 20, 2018

March 20, 2018

This is an automated email from the git hooks/post-receive script. New change to annotated tag echobase-4.0.14 in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git at af4136b2 (tag) tagging 90365d28b6cb705572ce74d34a7062d943276006 (commit) replaces echobase-4.0.13 tagged by Maven Release on Tue Mar 20 11:24:01 2018 +0100 - Log ----------------------------------------------------------------- [jgitflow-maven-plugin]tagging release 4.0.14 ----------------------------------------------------------------------- No new revisions were added by this update. -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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branch develop updated (9c5df671 -> 52a37f0c)
by codelutin.com scm March 20, 2018

March 20, 2018

This is an automated email from the git hooks/post-receive script. New change to branch develop in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git from 9c5df671 [jgitflow-maven-plugin]updating poms for 4.0.15-SNAPSHOT development new 07383576 [jgitflow-maven-plugin]updating develop poms to master versions to avoid merge conflicts new f2878178 [jgitflow-maven-plugin]updating poms for branch'release/4.0.14' with non-snapshot versions new 90365d28 [jgitflow-maven-plugin]merging 'release/4.0.14' into 'master' new 8d335e3c [jgitflow-maven-plugin]merging 'master' into 'develop' new 52a37f0c [jgitflow-maven-plugin]Updating develop poms back to pre merge state The 5 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Detailed log of new commits: commit 52a37f0ce06263b2c2ec4bdd894000d6b4040544 Author: Maven Release <maven-release(a)codelutin.com> Date: Tue Mar 20 11:24:30 2018 +0100 [jgitflow-maven-plugin]Updating develop poms back to pre merge state commit 8d335e3c2169954e8a0abc46237c64f7d9a2f23e Merge: 07383576 90365d28 Author: Maven Release <maven-release(a)codelutin.com> Date: Tue Mar 20 11:24:15 2018 +0100 [jgitflow-maven-plugin]merging 'master' into 'develop' commit 073835765c5bdfcacb5b667e1bfe1d2d326947b0 Author: Maven Release <maven-release(a)codelutin.com> Date: Tue Mar 20 11:24:13 2018 +0100 [jgitflow-maven-plugin]updating develop poms to master versions to avoid merge conflicts commit 90365d28b6cb705572ce74d34a7062d943276006 Merge: be377dde f2878178 Author: Maven Release <maven-release(a)codelutin.com> Date: Tue Mar 20 11:23:59 2018 +0100 [jgitflow-maven-plugin]merging 'release/4.0.14' into 'master' commit f28781781fe8fac9586b9d761e778fecedef696b Author: Maven Release <maven-release(a)codelutin.com> Date: Tue Mar 20 11:19:53 2018 +0100 [jgitflow-maven-plugin]updating poms for branch'release/4.0.14' with non-snapshot versions Summary of changes: -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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branch master updated (be377dde -> 90365d28)
by codelutin.com scm March 20, 2018

March 20, 2018

This is an automated email from the git hooks/post-receive script. New change to branch master in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git from be377dde [jgitflow-maven-plugin]merging 'release/4.0.13' into 'master' adds 16bbbae4 [jgitflow-maven-plugin]updating poms for 4.0.14-SNAPSHOT development adds ecfafdda [jgitflow-maven-plugin]updating develop poms to master versions to avoid merge conflicts adds 66b830e8 [jgitflow-maven-plugin]merging 'master' into 'develop' adds ccb6a0b2 [jgitflow-maven-plugin]Updating develop poms back to pre merge state adds b4ecf781 Fix subsamples import adds 68d3b25b refs #9685 : fixes biotic ICES export fixes #9735 fixes #9734 fixes #9714 adds 3653682f fixes #9736: Il n'y a que des données associées au SaCategory "D4" dans l'export acoustic adds 24614be9 Update postgres version to avoid missing am.amcanorder column bug on postgres server >=9.6 adds 4cc27889 fixes #9687 : La suppression d'un voyage/transit/transect ne fonctionne pas. adds 016cd029 fixes #9774 : Décalage dans ESDUs auxquels sont attribués les résultats NASC par echotypes en base et dans l'export xml acoustic adds 1083a949 fixes #9778 : Les latitudes et longitudes des logs du fichier acoustic sont égales à zéro adds 1dd70771 fixes #9685 : Les fichiers xml biotic et acoustic de thalassa PELGAS2015 ne s'importent plus dans le portail ICES adds f2878178 [jgitflow-maven-plugin]updating poms for branch'release/4.0.14' with non-snapshot versions adds 90365d28 [jgitflow-maven-plugin]merging 'release/4.0.14' into 'master' No new revisions were added by this update. Summary of changes: echobase-domain/pom.xml | 2 +- echobase-services/pom.xml | 2 +- .../service/atlantos/xml/XmlAccousticExport.java | 20 ++++--- .../service/atlantos/xml/XmlBioticExport.java | 64 +++++++++++++++++----- .../VoyageCatchesSubSampleImportAction.java | 2 +- .../strategy/CommonAllRemoveDataStrategy.java | 37 +++++++++++++ echobase-ui/pom.xml | 2 +- pom.xml | 4 +- 8 files changed, 106 insertions(+), 27 deletions(-) -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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[ANN] - EchoBase 4.0.14 released
by codelutin.com Release Notification March 20, 2018

March 20, 2018

The EchoBase team is pleased to announce the echobase-4.0.14 release! The French Institute for the Exploitation of the Sea (Ifremer) has designed an open software suite for storing fisheries acoustic data and computing acoustic indicators for survey-based ecosystem monitoring. It comprises a postgreSQL database designed to store acoustic, navigation and fishing data from ecosystemic surveys (EchoBase) and a suite of R codes (EchoR) for computing fish population indicators based on Echobase data. Documentation of the project can be found here: http://echobase.codelutin.com Changes ------- Changes in this version include: Fixed Bugs: o Les fichiers xml biotic et acoustic de thalassa PELGAS2015 ne s'importent plus dans le portail ICES Issue: 9685. Thanks to Mathieu Doray. Resolved by jcouteau. o Les latitudes et longitudes des logs du fichier acoustic sont égales à zéro Issue: 9778. Thanks to Mathieu Doray. Resolved by jcouteau. o Décalage dans ESDUs auxquels sont attribués les résultats NASC par echotypes en base et dans l'export xml acoustic Issue: 9774. Thanks to Mathieu Doray. Resolved by jcouteau. o Samples sans data dans l'export acoustic Issue: 9727. Thanks to Mathieu Doray. Resolved by jcouteau. o La suppression d'un voyage/transit/transect ne fonctionne pas Issue: 9687. Thanks to Mathieu Doray. Resolved by jcouteau. o le chapitre calibration est manquant dans l'export acoustic Issue: 9749. Thanks to Mathieu Doray. Resolved by jcouteau. o Lignes biology dupliquées dans l'export biotic Issue: 9735. Thanks to Mathieu Doray. Resolved by jcouteau. o Différences dans les subsamples entre la base et l'export biotic pour PELGAS2015 Issue: 9734. Thanks to Mathieu Doray. Resolved by jcouteau. o Il n'y a que des données associées au SaCategory "D4" dans l'export acoustic Issue: 9736. Thanks to Mathieu Doray. Resolved by jcouteau. o N'exporter vers CIEM que les données biotic de certaines espèces et les opérations qui ont des samples attachés Issue: 9714. Thanks to Mathieu Doray. Resolved by jcouteau. Changes: o Fournir des fichiers de données d'import cohérents pour les tests Issue: 9748. Thanks to Mathieu Doray. Resolved by mdoray. Downloads --------- For a manual installation, you can download files here: https://forge.codelutin.com/projects/echobase/files * echobase-embedded-4.0.14.zip - https://forge.codelutin.com/attachments/download/5119 * echobase-referentiel-4.0.14.echobase - https://forge.codelutin.com/attachments/download/5120 * echobase-ui-4.0.14-full.war - https://forge.codelutin.com/attachments/download/5121 * echobase-ui-4.0.14-lizmap.zip - https://forge.codelutin.com/attachments/download/5122 Maven artifacts --------------- Artifacts are deployed in nuiton maven repository https://nexus.nuiton.org/nexus/content/repositories/other-releases/ Have fun! -EchoBase team

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branch develop updated (1dd70771 -> 9c5df671)
by codelutin.com scm March 20, 2018

March 20, 2018

This is an automated email from the git hooks/post-receive script. New change to branch develop in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git from 1dd70771 fixes #9685 : Les fichiers xml biotic et acoustic de thalassa PELGAS2015 ne s'importent plus dans le portail ICES new 9c5df671 [jgitflow-maven-plugin]updating poms for 4.0.15-SNAPSHOT development The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Detailed log of new commits: commit 9c5df671a5edc07c73c4ff376f5c2a54a5a01a9a Author: Maven Release <maven-release(a)codelutin.com> Date: Tue Mar 20 11:11:24 2018 +0100 [jgitflow-maven-plugin]updating poms for 4.0.15-SNAPSHOT development Summary of changes: echobase-domain/pom.xml | 2 +- echobase-services/pom.xml | 2 +- echobase-ui/pom.xml | 2 +- pom.xml | 2 +- 4 files changed, 4 insertions(+), 4 deletions(-) -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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branch develop updated (1083a949 -> 1dd70771)
by codelutin.com scm March 20, 2018

March 20, 2018

This is an automated email from the git hooks/post-receive script. New change to branch develop in repository echobase. See https://gitlab.nuiton.org/codelutin/echobase.git from 1083a949 fixes #9778 : Les latitudes et longitudes des logs du fichier acoustic sont égales à zéro new 1dd70771 fixes #9685 : Les fichiers xml biotic et acoustic de thalassa PELGAS2015 ne s'importent plus dans le portail ICES The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Detailed log of new commits: commit 1dd70771b83ba5b56ec32c5e1f037f25eea0254b Author: Jean Couteau <jean.couteau(a)gmail.com> Date: Tue Mar 20 11:03:28 2018 +0100 fixes #9685 : Les fichiers xml biotic et acoustic de thalassa PELGAS2015 ne s'importent plus dans le portail ICES Summary of changes: .../service/atlantos/xml/XmlAccousticExport.java | 6 +- .../service/atlantos/xml/XmlBioticExport.java | 241 ++++++++++----------- 2 files changed, 122 insertions(+), 125 deletions(-) -- To stop receiving notification emails like this one, please contact codelutin.com SCM administrator <admin+scm(a)codelutin.com>.

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