"projectId": 2722779,

   "groupId": 0,

   "title": "7.0-RC-20",

 }

 # ObServe changelog

  * Author [Tony Chemit](mailto:dev@tchemit.fr)

  * Last generated at 2018-09-16 22:22.

 ## Version [8.0-alpha-3](https://gitlab.com/ultreiaio/ird-observe/milestones/114)

   * [[Evolution 922]](https://gitlab.com/ultreiaio/ird-observe/issues/922) **Ajoute le référentiel observe_common.DataQuality sur les données existantes** (Thanks to Tony CHEMIT) (Reported by Tony CHEMIT)

   * [[Evolution 950]](https://gitlab.com/ultreiaio/ird-observe/issues/950) **Renommage de la classe seine.WeightCategory en seine.WeightCategorySeine** (Thanks to Tony CHEMIT) (Reported by Tony CHEMIT)

 ## Version [7.0-RC-19](https://gitlab.com/ultreiaio/ird-observe/milestones/122)

 **Closed at 2018-09-16.**

 * [Serveur (observe-7.0-RC-15.war)](https://ultreia.io/release/observe-7.0-RC-15.war)

 ### Issues

 ## Version [7.0-RC-14](https://gitlab.com/ultreiaio/ird-observe/milestones/111)

 import fr.ird.observe.dto.decoration.decorators.ReferentialReferenceDecorator;

 import fr.ird.observe.dto.form.Form;

 import fr.ird.observe.dto.form.FormDefinition;

 import fr.ird.observe.dto.reference.ReferentialDtoReference;

 import fr.ird.observe.dto.referential.I18nReferentialDto;

 import fr.ird.observe.dto.referential.ProgramDto;

 import fr.ird.observe.spi.map.ImmutableSetDtoMap;

 import org.apache.commons.lang3.StringUtils;

 import org.apache.commons.lang3.tuple.Pair;

 import org.apache.logging.log4j.LogManager;

 import org.nuiton.decorator.Decorator;

 import org.nuiton.jaxx.runtime.swing.CardLayout2Ext;

 import org.nuiton.jaxx.validator.swing.SwingValidatorUtil;

     }

     private static <E extends ReferentialDto, R extends ReferentialDtoReference<E, R>> Pair<Boolean, R> showUsagesForDelete(E entity,

                                                                                                                             List<R> referenceList) {

         DecoratorService service = ObserveSwingApplicationContext.get().getDecoratorService();

     }

     private static <E extends ReferentialDto, R extends ReferentialDtoReference<E, R>> Pair<Boolean, R> showUsagesForDesactivated(E entity,

                                                                                                                                   List<R> referenceList) {

         DecoratorService service = ObserveSwingApplicationContext.get().getDecoratorService();

         }

         // recherche des utilisation du bean dans la base

         DecoratorService dService = getDecoratorService();

         Decorator<D> decorator = dService.getDecoratorByType(getBeanType());

                 log.debug("entity status was desactivated, looking for usage");

             }

             if (usages.isEmpty()) {

                 if (log.isInfoEnabled()) {

         }

         // recherche des utilisation du bean dans la base

         R replaceReference = null;

   <import>

     fr.ird.observe.spi.map.ImmutableSetDtoMap

     fr.ird.observe.dto.reference.ReferentialDtoReference

     org.nuiton.jaxx.runtime.context.JAXXInitialContext

     org.nuiton.jaxx.widgets.select.BeanFilterableComboBox

   <script><![CDATA[

     return new UsageForDeleteUI<>(new JAXXInitialContext().add(message).add(usages).add(references));

 }

 <JPanel layout='{new BorderLayout()}' genericType="R extends ReferentialDtoReference">

   <import>

     fr.ird.observe.dto.reference.ReferentialDtoReference

     fr.ird.observe.spi.map.ImmutableSetDtoMap

   <script><![CDATA[

     return new UsageForDesactivateUI<>(new JAXXInitialContext().add(message).add(usages).add(references));

 }

   <import>

     fr.ird.observe.dto.reference.ReferentialDtoReference

     fr.ird.observe.spi.map.ImmutableSetDtoMap

     org.nuiton.jaxx.runtime.context.JAXXInitialContext

   <script><![CDATA[

     return new UsageForDisplayUI<>(new JAXXInitialContext().add(message).add(usages));

 }

 import fr.ird.observe.client.ObserveSwingApplicationContext;

 import fr.ird.observe.dto.IdDto;

 import fr.ird.observe.dto.decoration.DecoratorService;

 import fr.ird.observe.dto.decoration.ObserveI18nDecoratorHelper;

 import fr.ird.observe.dto.decoration.decorators.ReferentialReferenceDecorator;

 import fr.ird.observe.dto.reference.DtoReference;

 import fr.ird.observe.dto.reference.ReferentialDtoReference;

 import fr.ird.observe.dto.referential.ReferentialDto;

                 Set references = usages.get(dtoType);

                 String typeTitle = t(ObserveI18nDecoratorHelper.getTypeI18nKey(dtoType));

                 addReferentialReferenceUsages(dtoType, references, typeTitle);

             }

         }

             BeanFilterableComboBox<R> comboBox = getReplace();

         });

     }

     protected <D extends ReferentialDto, R extends ReferentialDtoReference<D, R>> void addReferentialReferenceUsages(Class<R> referenceType,

                 <input>friend:target/models:*.model</input>

               </inputs>

               <templates>

                 org.nuiton.topia.templates.TopiaMetaTransformer,

                 org.nuiton.topia.templates.TopiaMetadataModelGenerator

               </templates>

 import fr.ird.observe.dto.referential.ReferentialLocale;

 import fr.ird.observe.entities.seine.NonTargetCatch;

 /**

  * Created on 24/11/15.

  *

     @Override

     public NonTargetCatchReference toReference(ReferentialLocale referentialLocale, NonTargetCatch entity) {

         return new NonTargetCatchReference(entity, entity.getSpecies().getScientificLabel(),

     }

 }

   <parent>

     <groupId>io.ultreia.maven</groupId>

     <artifactId>pom</artifactId>

   </parent>

   <groupId>fr.ird.observe</groupId>

     <maven.build.timestamp.format>dd/MM/yyyy HH:mm z</maven.build.timestamp.format>

     <buildDate>${maven.build.timestamp}</buildDate>

     <!--<lib.version.java4all.topia>1.1.1</lib.version.java4all.topia>-->

     <!--<lib.version.java4all.eugene>3.0-alpha-22</lib.version.java4all.eugene>-->

     <!--<lib.version.java4all.jaxx>3.0-alpha-35</lib.version.java4all.jaxx>-->

     <!--<lib.version.nuiton.topia>3.4.2-SNAPSHOT</lib.version.nuiton.topia>-->

     <lib.version.nuiton.validation>3.1</lib.version.nuiton.validation>

     <xworkVersion>2.3.35</xworkVersion>

     <!--<lib.version.hibernate>5.2.10.Final</lib.version.hibernate>-->

     <!--can't use 1.4.197 (date has changed + blob also-->

 POST   /api/v1/referential/ReferentialService/computeMissingReferential                                                              v1.referential.ReferentialServiceRestApi.computeMissingReferential

 DELETE /api/v1/referential/ReferentialService/delete                                                                                 v1.referential.ReferentialServiceRestApi.delete

 GET    /api/v1/referential/ReferentialService/exists                                                                                 v1.referential.ReferentialServiceRestApi.exists

 GET    /api/v1/referential/ReferentialService/getReferenceSet                                                                        v1.referential.ReferentialServiceRestApi.getReferenceSet

 POST   /api/v1/referential/ReferentialService/getReferentialIds                                                                      v1.referential.ReferentialServiceRestApi.getReferentialIds

 GET    /api/v1/referential/ReferentialService/getReferentialReferenceSets                                                            v1.referential.ReferentialServiceRestApi.getReferentialReferenceSets

 import fr.ird.observe.dto.ObserveDto;

 import io.ultreia.java4all.http.HRestClientService;

 import org.apache.commons.beanutils.converters.AbstractConverter;

 import org.apache.logging.log4j.LogManager;

 import org.debux.webmotion.server.call.Call;

 import org.debux.webmotion.server.handler.ExecutorParametersInjectorHandler;

 import org.debux.webmotion.server.mapping.Mapping;

         ObserveDto observeDto = null;

         if (ObserveDto.class.isAssignableFrom(type)) {

             String gsonContent = ((String[]) parameterTree.getValue())[0];

         super.checkBeforeBuild();

         setTimeout(TimeUnit.MINUTES, serviceContext.getInitializer().getHttpTimeout());

         if (serviceContext.withApplicationLocale()) {

             addHeader(REQUEST_APPLICATION_LOCALE, serviceContext.getApplicationLocale().toString());

     public void executeSqlsRequests(ReferentialSynchronizeSqlsRequest request, ReferentialSynchronizeSqlsRequest oppositeSqlsRequest) {

         long startTime = TimeLog.getTime();

         byte[] insertSqlCode = oppositeSqlsRequest.getInsertSqlCode();

         byte[] updateSqlCode = oppositeSqlsRequest.getUpdateSqlCode();

         byte[] deleteSqlCode = request.getDeleteSqlCode();

         byte[] desactivateSqlCode = request.getDesactivateSqlCode();

         timeLog.log(startTime, "executeSqlsRequests");

  * it under the terms of the GNU General Public License as

  * published by the Free Software Foundation, either version 3 of the

  * License, or (at your option) any later version.

  * This program is distributed in the hope that it will be useful,

  * but WITHOUT ANY WARRANTY; without even the implied warranty of

  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

  * GNU General Public License for more details.

  * You should have received a copy of the GNU General Public

  * License along with this program.  If not, see

  * <http://www.gnu.org/licenses/gpl-3.0.html>.

 import com.google.common.base.Joiner;

 import com.google.common.collect.ImmutableList;

 import com.google.common.collect.ImmutableSet;

 import fr.ird.observe.binder.referential.ReferentialEntityDtoBinderSupport;

 import fr.ird.observe.binder.referential.ReferentialEntityReferenceBinderSupport;

 import fr.ird.observe.dto.IdDto;

 import fr.ird.observe.dto.form.Form;

 import fr.ird.observe.dto.form.FormDefinition;

 import fr.ird.observe.dto.reference.ReferentialDtoReference;

 import fr.ird.observe.dto.reference.ReferentialDtoReferenceSet;

 import fr.ird.observe.dto.referential.ReferenceStatus;

 import fr.ird.observe.dto.referential.seine.ObservedSystemReference;

 import fr.ird.observe.dto.result.SaveResultDto;

 import fr.ird.observe.entities.EntityMap;

 import fr.ird.observe.entities.longline.TripLongline;

 import fr.ird.observe.entities.referentiel.ObserveReferentialEntity;

 import fr.ird.observe.entities.referentiel.Species;

 import fr.ird.observe.spi.DbModelHelper;

 import fr.ird.observe.spi.DtoModelClasses;

 import fr.ird.observe.spi.DtoModelHelper;

 import fr.ird.observe.spi.context.ReferentialDtoEntityContext;

 import fr.ird.observe.spi.context.ReferentialEntityContext;

 import fr.ird.observe.spi.context.ReferentialReferenceEntityContext;

 import fr.ird.observe.spi.map.ImmutableDtoMap;

 import fr.ird.observe.spi.map.ImmutableSetDtoMap;

 import org.apache.logging.log4j.LogManager;

 import org.nuiton.topia.persistence.TopiaDao;

 import org.nuiton.topia.persistence.TopiaEntity;

 import org.nuiton.topia.persistence.metadata.TopiaMetadataModel;

     }

     @Override

         ReferentialDtoEntityContext<D, ?, ?> spi = DbModelHelper.fromReferentialDto(bean);

         Class<ObserveReferentialEntity> entityType = spi.toEntityType();

         TopiaDao<ObserveReferentialEntity> dao = getTopiaPersistenceContext().getDao(entityType);

         EntityMap allUsages = new EntityMap(dao.findAllUsages(entity));

         for (Class<? extends TopiaEntity> type : allUsages.keySet()) {

             List<? extends TopiaEntity> entities = allUsages.get(type);

             if (ObserveReferentialEntity.class.isAssignableFrom(type)) {

                 //noinspection unchecked

             }

         }

         return result.build();

         return result;

     }

         Class<R> referenceType = spi.toReferenceType();

         ReferentialEntityReferenceBinderSupport<D, R, E> binder = spi.toEntityReferenceBinder();

         ReferentialDtoReferenceSet<R> referenceSet = toReferentialReferenceSet(binder, entities, null);

         result.put(referenceType, referenceSet.toSet());

     }

     @Override

     public <D extends ReferentialDto> boolean exists(Class<D> type, String id) {

         if (log.isTraceEnabled()) {

     //tc-20160713 On ne met pas cette permission, car il s'agit d'appliquer un script sql, sans avoir besoin des droits applicatifs

 //    @WriteReferentialPermission

     @Write

     void applySqlRequests(ImmutableSet<String> sqlRequests);

     @ReadReferentialPermission

     // Note : sur cette méthode aucun droit métier à poser, les actions sont légitimes

     @Write

     void executeSqlsRequests(ReferentialSynchronizeSqlsRequest localSqlsRequest, ReferentialSynchronizeSqlsRequest oppositeSqlsRequest);

 }

  * it under the terms of the GNU General Public License as

  * published by the Free Software Foundation, either version 3 of the

  * License, or (at your option) any later version.

  * This program is distributed in the hope that it will be useful,

  * but WITHOUT ANY WARRANTY; without even the implied warranty of

  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

  * GNU General Public License for more details.

  * You should have received a copy of the GNU General Public

  * License along with this program.  If not, see

  * <http://www.gnu.org/licenses/gpl-3.0.html>.

  */

 import fr.ird.observe.dto.ObserveDto;

 import org.apache.logging.log4j.LogManager;

 /**

  * Created on 08/08/16.

     /** Logger. */

     private static final Logger log = LogManager.getLogger(ReferentialSynchronizeSqlsRequest.class);

     private final byte[] insertSqlCode;

     private final byte[] updateSqlCode;

     private final byte[] deleteSqlCode;

     private final byte[] desactivateSqlCode;

     private ReferentialSynchronizeSqlsRequest(String insertSqlCode,

                                               String updateSqlCode,

                                               String deleteSqlCode,

                                               String desactivateSqlCode) {

         this.insertSqlCode = insertSqlCode.getBytes();

         this.updateSqlCode = updateSqlCode.getBytes();

         this.deleteSqlCode = deleteSqlCode.getBytes();

         this.desactivateSqlCode = desactivateSqlCode.getBytes();

     }

         return deleteSqlCode;

     }

     public byte[] getDesactivateSqlCode() {

         return desactivateSqlCode;

     }

     public static class Builder {

         private final StringBuilder addTasksBuilder = new StringBuilder();

         private final StringBuilder updateTasksBuilder = new StringBuilder();

         private final StringBuilder deleteTasksBuilder = new StringBuilder();

         private final StringBuilder desactivateTasksBuilder = new StringBuilder();

         public ReferentialSynchronizeSqlsRequest build() {

             return new ReferentialSynchronizeSqlsRequest(addTasksBuilder.toString(),

                                                          updateTasksBuilder.toString(),

                                                          deleteTasksBuilder.toString(),

                                                          desactivateTasksBuilder.toString());

         }

             if (log.isInfoEnabled()) {

                 log.info("Add add sql: " + sql);

             }

             return this;

         }

             if (log.isInfoEnabled()) {

                 log.info("Add delete sql: " + sql);

             }

             return this;

         }

  */

 public interface NavigationService extends ObserveService {

     NavigationResult getNavigation(NavigationRequest request);

     @Get

  * it under the terms of the GNU General Public License as

  * published by the Free Software Foundation, either version 3 of the

  * License, or (at your option) any later version.

  * This program is distributed in the hope that it will be useful,

  * but WITHOUT ANY WARRANTY; without even the implied warranty of

  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

  * GNU General Public License for more details.

  * You should have received a copy of the GNU General Public

  * License along with this program.  If not, see

  * <http://www.gnu.org/licenses/gpl-3.0.html>.

     @ReadDataPermission

     @ReadReferentialPermission

     ExportTripResult exportTrip(ExportTripRequest exportRequest);

     @WriteDataPermission

     @Write

     DeleteTripResult deleteTrip(DeleteTripRequest request);

     @WriteDataPermission

     @Write

     ImportTripResult importTrip(ImportTripRequest request);

 import com.google.common.collect.ImmutableSet;

 import fr.ird.observe.dto.IdDto;

 import fr.ird.observe.dto.form.Form;

 import fr.ird.observe.dto.reference.ReferentialDtoReference;

 import fr.ird.observe.dto.reference.ReferentialDtoReferenceSet;

 import fr.ird.observe.dto.referential.ReferentialDto;

 import fr.ird.observe.dto.referential.SpeciesGroupDto;

 import fr.ird.observe.dto.referential.seine.ObservedSystemReference;

 import fr.ird.observe.dto.result.SaveResultDto;

 import fr.ird.observe.services.service.ObserveService;

 import fr.ird.observe.services.spi.ReadDataPermission;

 import fr.ird.observe.services.spi.ReadReferentialPermission;

 import io.ultreia.java4all.http.spi.Get;

 import io.ultreia.java4all.http.spi.Nullable;

 import io.ultreia.java4all.http.spi.Post;

 import java.util.Date;

 import java.util.List;

     @Write

     <E extends ReferentialDto> void replaceReference(Class<E> beanType, String idToReplace, String replaceId);

     @ReadReferentialPermission

     @ReadDataPermission

     @Get

     @ReadReferentialPermission

     @ReadReferentialPermission

     @ReadDataPermission

     MissingReferentialResult computeMissingReferential(MissingReferentialRequest request);

     @ReadReferentialPermission

     @WriteDataPermission

     @Write

     void insertMissingReferential(TopiaSqlScript sqlContent);

  * #L%

  */

 import fr.ird.observe.services.service.ObserveService;

 import io.ultreia.java4all.http.spi.Get;

 /**

  * Created on 31/12/15.

  */

 public interface SqlScriptProducerService extends ObserveService {

     TopiaSqlScript produceAddSqlScript(AddSqlScriptProducerRequest request);

     TopiaSqlScript produceDeleteSqlScript(DeleteSqlScriptProducerRequest request);