- Tutti-commits - mailman.cloud.codelutin.com

01 Feb '13

Author: tchemit Date: 2013-02-01 01:53:55 +0100 (Fri, 01 Feb 2013) New Revision: 281 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/281 Log: use protocolPersistenceDriver in TuttiPersistence use a file storage protocol persistence strategy optimize dependencies + third parties import / export protocol caracteristics Added: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java Modified: trunk/pom.xml trunk/tutti-persistence-adagio/pom.xml trunk/tutti-persistence-adagio/src/license/THIRD-PARTY.properties trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceAdagioImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/config/TuttiPersistenceAdagioConfig.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/config/TuttiPersistenceAdagioConfigOption.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceServiceTest.java trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceTest.java trunk/tutti-persistence-dev/src/license/THIRD-PARTY.properties trunk/tutti-persistence-dev/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceDevImpl.java trunk/tutti-persistence/pom.xml trunk/tutti-persistence/src/license/THIRD-PARTY.properties trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistence.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceService.java trunk/tutti-service/pom.xml trunk/tutti-service/src/license/THIRD-PARTY.properties trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java trunk/tutti-service/src/main/resources/i18n/tutti-service_fr_FR.properties trunk/tutti-ui-swing/src/license/THIRD-PARTY.properties trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties Modified: trunk/pom.xml =================================================================== --- trunk/pom.xml 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/pom.xml 2013-02-01 00:53:55 UTC (rev 281) @@ -281,7 +281,14 @@ <version>0.5.0</version> </dependency> + <dependency> + <groupId>commons-dbcp</groupId> + <artifactId>commons-dbcp</artifactId> + <version>1.3</version> + </dependency> + + <dependency> <groupId>org.hibernate</groupId> <artifactId>hibernate-core</artifactId> <version>${hibernateVersion}</version> Modified: trunk/tutti-persistence/pom.xml =================================================================== --- trunk/tutti-persistence/pom.xml 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-persistence/pom.xml 2013-02-01 00:53:55 UTC (rev 281) @@ -71,6 +71,11 @@ </dependency> <dependency> + <groupId>com.esotericsoftware.yamlbeans</groupId> + <artifactId>yamlbeans</artifactId> + </dependency> + + <dependency> <groupId>org.springframework</groupId> <artifactId>spring-tx</artifactId> <scope>provided</scope> @@ -82,6 +87,10 @@ <scope>provided</scope> </dependency> + <dependency> + <groupId>junit</groupId> + <artifactId>junit</artifactId> + </dependency> </dependencies> <build> Modified: trunk/tutti-persistence/src/license/THIRD-PARTY.properties =================================================================== --- trunk/tutti-persistence/src/license/THIRD-PARTY.properties 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-persistence/src/license/THIRD-PARTY.properties 2013-02-01 00:53:55 UTC (rev 281) @@ -3,20 +3,22 @@ # Already used licenses in project : # - BSD License # - COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0 +# - Common Public License Version 1.0 # - Indiana University Extreme! Lab Software License, vesion 1.1.1 # - Lesser General Public License (LGPL) v 3.0 # - Lesser General Public License (LPGL) # - Lesser General Public License (LPGL) v 2.1 # - MIT License +# - New BSD License # - Public Domain # - The Apache Software License, Version 2.0 +# - license.txt #------------------------------------------------------------------------------- # Please fill the missing licenses for dependencies : # # -#Sat Jan 19 08:25:52 CET 2013 +#Fri Feb 01 01:24:24 CET 2013 antlr--antlr--2.7.6=BSD License commons-primitives--commons-primitives--1.0=The Apache Software License, Version 2.0 dom4j--dom4j--1.6.1=BSD License javax.transaction--jta--1.1=COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0 -regexp--regexp--1.3=The Apache Software License, Version 2.0 \ No newline at end of file Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistence.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistence.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistence.java 2013-02-01 00:53:55 UTC (rev 281) @@ -214,6 +214,9 @@ @Transactional(readOnly = false) TuttiProtocol saveProtocol(TuttiProtocol bean); + @Transactional(readOnly = false) + void deleteProtocol(String id); + //------------------------------------------------------------------------// //-- FishingOperation methods --// //------------------------------------------------------------------------// Added: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java 2013-02-01 00:53:55 UTC (rev 281) @@ -0,0 +1,89 @@ +package fr.ifremer.tutti.persistence.entities.protocol; + +/* + * #%L + * Tutti :: Persistence API + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.esotericsoftware.yamlbeans.YamlConfig; +import com.esotericsoftware.yamlbeans.YamlException; +import com.esotericsoftware.yamlbeans.YamlReader; +import com.esotericsoftware.yamlbeans.YamlWriter; +import com.google.common.base.Charsets; +import com.google.common.io.Closeables; +import com.google.common.io.Files; + +import java.io.BufferedWriter; +import java.io.File; +import java.io.IOException; +import java.io.Reader; + +/** + * Helper classaround {@link TuttiProtocol}. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class TuttiProtocols { + + public static void toFile(TuttiProtocol protocol, File file) throws IOException { + + String id = protocol.getId(); + + BufferedWriter fileWriter = Files.newWriter(file, Charsets.UTF_8); + try { + YamlWriter writer = new YamlWriter(fileWriter, createConfig()); + writer.write(protocol); + writer.close(); + fileWriter.close(); + } catch (YamlException e) { + throw new IOException("Could not transform protocol " + id + " to file " + file, e); + } finally { + Closeables.closeQuietly(fileWriter); + } + } + + public static TuttiProtocol fromFile(File file) throws IOException { + + + Reader fileReader = Files.newReader(file, Charsets.UTF_8); + try { + YamlReader reader = new YamlReader(fileReader, createConfig()); + TuttiProtocol result = reader.read(TuttiProtocol.class); + fileReader.close(); + return result; + } catch (YamlException e) { + throw new IOException("Could not import protocol from file " + file, e); + } finally { + Closeables.closeQuietly(fileReader); + } + } + + protected static YamlConfig createConfig() { + YamlConfig result = new YamlConfig(); + result.setClassTag(SpeciesProtocol.class.getSimpleName(), + SpeciesProtocol.class); + result.writeConfig.setAlwaysWriteClassname(false); + result.writeConfig.setWriteRootTags(false); + return result; + } +} Property changes on: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceService.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceService.java 2013-02-01 00:53:55 UTC (rev 281) @@ -25,7 +25,6 @@ */ import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; -import org.springframework.transaction.annotation.Transactional; import java.util.List; @@ -35,18 +34,24 @@ * @author tchemit <chemit(a)codelutin.com> * @since 0.3 */ -@Transactional(readOnly = true) +//@Transactional(readOnly = true) public interface ProtocolPersistenceService { List<String> getAllProtocolId(); + List<String> getAllProtocolNames(); + List<TuttiProtocol> getAllProtocol(); TuttiProtocol getProtocol(String id); - @Transactional(readOnly = false) + // @Transactional(readOnly = false) TuttiProtocol createProtocol(TuttiProtocol bean); - @Transactional(readOnly = false) + // @Transactional(readOnly = false) TuttiProtocol saveProtocol(TuttiProtocol bean); + + // @Transactional(readOnly = false) + void deleteProtocol(String protocolId); + } Added: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java (rev 0) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java 2013-02-01 00:53:55 UTC (rev 281) @@ -0,0 +1,234 @@ +package fr.ifremer.tutti.persistence.entities.protocol; + +/* + * #%L + * Tutti :: Persistence API + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.google.common.base.Charsets; +import com.google.common.collect.Lists; +import com.google.common.io.Files; +import org.apache.commons.lang3.StringUtils; +import org.apache.commons.lang3.SystemUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.junit.Assert; +import org.junit.Before; +import org.junit.Rule; +import org.junit.Test; +import org.junit.rules.TestName; + +import java.io.File; +import java.io.IOException; + +/** + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class TuttiProtocolsTest { + + /** Logger. */ + private static final Log log = LogFactory.getLog(TuttiProtocolsTest.class); + + + public static final String PROTOCOL_FILE_CONTENT = + "id: 1\n" + + "name: protocolName\n" + + "comment: Commentaire\n" + + "environmentPmfmId: \n" + + "- 114\n" + + "- 228\n" + + "- 821\n" + + "gearPmfmId: \n" + + "- 21\n" + + "- 22\n" + + "hydrologyPmfmId: []\n" + + "lengthClassesPmfmId: \n" + + "- 14\n" + + "- 18\n" + + "species: \n" + + "- !SpeciesProtocol\n" + + " id: 1\n" + + " calcifySampleEnabled: true\n" + + " lengthStepPmfmId: 1394\n" + + " maturityEnabled: true\n" + + " sexEnabled: true\n" + + " speciesId: 11242\n" + + " weightEnabled: true\n" + + "- !SpeciesProtocol\n" + + " id: 2\n" + + " ageEnabled: true\n" + + " calcifySampleEnabled: true\n" + + " countIfNoFrequencyEnabled: true\n" + + " lengthStepPmfmId: 323\n" + + " maturityEnabled: true\n" + + " sexEnabled: true\n" + + " sizeEnabled: true\n" + + " speciesId: 3835\n" + + " weightEnabled: true"; + + + public static final long TIMESTAMP = System.nanoTime(); + + @Rule + public final TestName name = new TestName(); + + protected File datadirectory; + + @Before + public void setUp() throws Exception { + + datadirectory = getTestSpecificDirectory(getClass(), + name.getMethodName(), + null); + } + + @Test + public void toFile() throws IOException { + + File file = new File(datadirectory, "exportProtocol.yaml"); + + Files.createParentDirs(file); + + Assert.assertFalse(file.exists()); + TuttiProtocol protocol = createProtocolFixture(); + + TuttiProtocols.toFile(protocol, file); + Assert.assertTrue(file.exists()); + + String exportFileToString = Files.toString(file, Charsets.UTF_8).trim(); + Assert.assertEquals(PROTOCOL_FILE_CONTENT, exportFileToString); + } + + @Test + public void fromFile() throws IOException { + + File file = new File(datadirectory, "importProtocol.yaml"); + + Files.createParentDirs(file); + + Files.write(PROTOCOL_FILE_CONTENT, file, Charsets.UTF_8); + + TuttiProtocol protocol = TuttiProtocols.fromFile(file); + + Assert.assertNotNull(protocol); + Assert.assertEquals("1", protocol.getId()); + Assert.assertEquals("protocolName", protocol.getName()); + Assert.assertEquals("Commentaire", protocol.getComment()); + Assert.assertEquals(Lists.newArrayList("14", "18"), protocol.getLengthClassesPmfmId()); + Assert.assertEquals(Lists.newArrayList("114", "228", "821"), protocol.getEnvironmentPmfmId()); + Assert.assertEquals(Lists.newArrayList("21", "22"), protocol.getGearPmfmId()); + Assert.assertEquals(Lists.<String>newArrayList(), protocol.getHydrologyPmfmId()); + Assert.assertNotNull(protocol.getSpecies()); + Assert.assertEquals(2, protocol.getSpecies().size()); + SpeciesProtocol sp1 = protocol.getSpecies().get(0); + Assert.assertNotNull(sp1); + Assert.assertEquals("1", sp1.getId()); + Assert.assertEquals("11242", sp1.getSpeciesId()); + Assert.assertEquals("1394", sp1.getLengthStepPmfmId()); + Assert.assertFalse(sp1.isAgeEnabled()); + Assert.assertTrue(sp1.isCalcifySampleEnabled()); + Assert.assertFalse(sp1.isCountIfNoFrequencyEnabled()); + Assert.assertTrue(sp1.isMaturityEnabled()); + Assert.assertTrue(sp1.isSexEnabled()); + Assert.assertFalse(sp1.isSizeEnabled()); + Assert.assertTrue(sp1.isWeightEnabled()); + + SpeciesProtocol sp2 = protocol.getSpecies().get(1); + Assert.assertNotNull(sp2); + Assert.assertEquals("2", sp2.getId()); + Assert.assertEquals("3835", sp2.getSpeciesId()); + Assert.assertEquals("323", sp2.getLengthStepPmfmId()); + Assert.assertTrue(sp2.isAgeEnabled()); + Assert.assertTrue(sp2.isCalcifySampleEnabled()); + Assert.assertTrue(sp2.isCountIfNoFrequencyEnabled()); + Assert.assertTrue(sp2.isMaturityEnabled()); + Assert.assertTrue(sp2.isSexEnabled()); + Assert.assertTrue(sp2.isSizeEnabled()); + Assert.assertTrue(sp2.isWeightEnabled()); + } + + private TuttiProtocol createProtocolFixture() { + TuttiProtocol protocol = new TuttiProtocol(); + protocol.setId("1"); + protocol.setName("protocolName"); + protocol.setComment("Commentaire"); + protocol.setLengthClassesPmfmId(Lists.newArrayList("14", "18")); + protocol.setEnvironmentPmfmId(Lists.newArrayList("114", "228", "821")); + protocol.setGearPmfmId(Lists.newArrayList("21", "22")); + protocol.setHydrologyPmfmId(Lists.<String>newArrayList()); + + protocol.setSpecies(Lists.<SpeciesProtocol>newArrayList()); + SpeciesProtocol sp1 = new SpeciesProtocol(); + sp1.setId("1"); + sp1.setSpeciesId("11242"); + sp1.setLengthStepPmfmId("1394"); + sp1.setCalcifySampleEnabled(true); + sp1.setMaturityEnabled(true); + sp1.setSexEnabled(true); + sp1.setWeightEnabled(true); + protocol.addSpecies(sp1); + + SpeciesProtocol sp2 = new SpeciesProtocol(); + sp2.setId("2"); + sp2.setSpeciesId("3835"); + sp2.setLengthStepPmfmId("323"); + sp2.setAgeEnabled(true); + sp2.setCalcifySampleEnabled(true); + sp2.setCountIfNoFrequencyEnabled(true); + sp2.setMaturityEnabled(true); + sp2.setSexEnabled(true); + sp2.setSizeEnabled(true); + sp2.setWeightEnabled(true); + protocol.addSpecies(sp2); + return protocol; + } + + public static File getTestSpecificDirectory(Class<?> testClassName, + String methodName, + String classifier) { + // Trying to look for the temporary folder to store data for the test + String tempDirPath = System.getProperty("java.io.tmpdir"); + if (tempDirPath == null) { + // can this really occur ? + tempDirPath = ""; + if (log.isWarnEnabled()) { + log.warn("'\"java.io.tmpdir\" not defined"); + } + } + File tempDirFile = SystemUtils.getJavaIoTmpDir(); + + // create the directory to store database data + String dataBasePath = testClassName.getName() + + File.separator // a directory with the test class name + + methodName; // a sub-directory with the method name + + if (StringUtils.isNotBlank(classifier)) { + dataBasePath += classifier; + } + dataBasePath += '_' + + TIMESTAMP; // and a timestamp + File databaseFile = new File(tempDirFile, dataBasePath); + return databaseFile; + } + +} Property changes on: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Modified: trunk/tutti-persistence-adagio/pom.xml =================================================================== --- trunk/tutti-persistence-adagio/pom.xml 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-persistence-adagio/pom.xml 2013-02-01 00:53:55 UTC (rev 281) @@ -69,10 +69,10 @@ <artifactId>guava</artifactId> </dependency> -  + </dependency> <dependency> <groupId>commons-io</groupId> @@ -80,6 +80,16 @@ </dependency> <dependency> + <groupId>commons-collections</groupId> + <artifactId>commons-collections</artifactId> + </dependency> + + <dependency> + <groupId>commons-dbcp</groupId> + <artifactId>commons-dbcp</artifactId> + </dependency> + + <dependency> <groupId>commons-logging</groupId> <artifactId>commons-logging</artifactId> </dependency> @@ -98,13 +108,17 @@ <groupId>org.springframework</groupId> <artifactId>spring-context</artifactId> </dependency> + <dependency> + <groupId>org.springframework</groupId> + <artifactId>spring-jdbc</artifactId> + </dependency> -  <dependency> Modified: trunk/tutti-service/src/license/THIRD-PARTY.properties =================================================================== --- trunk/tutti-service/src/license/THIRD-PARTY.properties 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-service/src/license/THIRD-PARTY.properties 2013-02-01 00:53:55 UTC (rev 281) @@ -6,6 +6,7 @@ # - COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0 # - Common Public License Version 1.0 # - Eclipse Public License - v 1.0 +# - GNU Library or Lesser General Public License # - General Public License (GPL) # - HSQLDB License # - Indiana University Extreme! Lab Software License, vesion 1.1.1 @@ -22,9 +23,8 @@ # Please fill the missing licenses for dependencies : # # -#Sat Jan 19 08:25:57 CET 2013 +#Fri Feb 01 01:24:27 CET 2013 antlr--antlr--2.7.6=BSD License commons-primitives--commons-primitives--1.0=The Apache Software License, Version 2.0 dom4j--dom4j--1.6.1=BSD License javax.transaction--jta--1.1=COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0 -regexp--regexp--1.3=The Apache Software License, Version 2.0 Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java 2013-02-01 00:53:55 UTC (rev 281) @@ -48,6 +48,8 @@ import fr.ifremer.tutti.persistence.entities.referential.Species; import fr.ifremer.tutti.persistence.entities.referential.Vessel; import fr.ifremer.tutti.persistence.entities.referential.Zone; +import fr.ifremer.tutti.persistence.service.ProtocolPersistenceService; +import fr.ifremer.tutti.persistence.service.ProtocolPersistenceServiceImpl; import fr.ifremer.tutti.persistence.service.TuttiPersistenceServiceLocator; import fr.ifremer.tutti.service.config.TuttiServiceConfig; import org.apache.commons.io.IOUtils; @@ -72,6 +74,8 @@ protected TuttiPersistence driver; + protected ProtocolPersistenceService protocolPersistenceService; + @Override public void setServiceContext(TuttiServiceContext context) { super.setServiceContext(context); @@ -117,9 +121,6 @@ if (driverConfig.isDbExists()) { // can use adagio driver - -// driverConfig.initConfig(context.getResourceLoader()); - driver = TuttiPersistenceServiceLocator.getPersistenceService(); if (log.isInfoEnabled()) { @@ -141,7 +142,10 @@ driver = devDriver; } - + //TODO: TC use driver + protocolPersistenceService = new ProtocolPersistenceServiceImpl(); + //TuttiPersistenceServiceLocator.getProtocolPersistenceService(); + ((ProtocolPersistenceServiceImpl) protocolPersistenceService).setConfig(driverConfig); } @Override @@ -323,29 +327,34 @@ @Override public List<String> getAllProtocolNames() { - return devDriver.getAllProtocolNames(); + return protocolPersistenceService.getAllProtocolNames(); } @Override public List<TuttiProtocol> getAllProtocol() { - return devDriver.getAllProtocol(); + return protocolPersistenceService.getAllProtocol(); } @Override public TuttiProtocol getProtocol(String id) { - return devDriver.getProtocol(id); + return protocolPersistenceService.getProtocol(id); } @Override public TuttiProtocol createProtocol(TuttiProtocol bean) { - return devDriver.createProtocol(bean); + return protocolPersistenceService.createProtocol(bean); } @Override public TuttiProtocol saveProtocol(TuttiProtocol bean) { - return devDriver.saveProtocol(bean); + return protocolPersistenceService.saveProtocol(bean); } + @Override + public void deleteProtocol(String id) { + protocolPersistenceService.deleteProtocol(id); + } + //------------------------------------------------------------------------// //-- FishingOperation methods --// //------------------------------------------------------------------------// Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java 2013-02-01 00:53:55 UTC (rev 281) @@ -24,10 +24,6 @@ * #L% */ -import com.esotericsoftware.yamlbeans.YamlConfig; -import com.esotericsoftware.yamlbeans.YamlException; -import com.esotericsoftware.yamlbeans.YamlReader; -import com.esotericsoftware.yamlbeans.YamlWriter; import com.google.common.base.Charsets; import com.google.common.base.Function; import com.google.common.base.Preconditions; @@ -36,8 +32,8 @@ import com.google.common.collect.TreeMultimap; import com.google.common.io.Closeables; import com.google.common.io.Files; -import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocol; import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; +import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocols; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.service.AbstractTuttiService; import org.apache.commons.collections.CollectionUtils; @@ -68,46 +64,12 @@ LogFactory.getLog(TuttiProtocolImportExportService.class); public void exportProtocol(TuttiProtocol protocol, File file) throws IOException { - - YamlConfig config = createConfig(); - - String id = protocol.getId(); - - if (log.isInfoEnabled()) { - log.info("Will export protocol: " + id + " to file: " + file); - } - - BufferedWriter fileWriter = Files.newWriter(file, Charsets.UTF_8); - try { - YamlWriter writer = new YamlWriter(fileWriter, config); - writer.write(protocol); - writer.close(); - fileWriter.close(); - } catch (YamlException e) { - throw new IOException("Could not export protocol " + id, e); - } finally { - Closeables.closeQuietly(fileWriter); - } + TuttiProtocols.toFile(protocol, file); } public TuttiProtocol importProtocol(File file) throws IOException { - if (log.isInfoEnabled()) { - log.info("Will import protocol from file: " + file); - } - - YamlConfig config = createConfig(); - - Reader fileReader = Files.newReader(file, Charsets.UTF_8); - try { - YamlReader reader = new YamlReader(fileReader, config); - TuttiProtocol result = reader.read(TuttiProtocol.class); - fileReader.close(); - return result; - } catch (YamlException e) { - throw new IOException("Could not import protocol from file " + file, e); - } finally { - Closeables.closeQuietly(fileReader); - } + TuttiProtocol result = TuttiProtocols.fromFile(file); + return result; } public void importProtocolCaracteristic(File file, @@ -156,7 +118,7 @@ Closeables.closeQuietly(importer); } reader.close(); - } catch (YamlException e) { + } catch (Exception e) { throw new IOException("Could not import protocol [" + protocol.getName() + "] caracteristic from file " + file, e); } finally { @@ -256,22 +218,13 @@ log.info("TODO"); } fileReader.close(); - } catch (YamlException e) { + } catch (Exception e) { throw new IOException("Could not import protocol [" + protocol.getName() + "] species from file " + file, e); } finally { Closeables.closeQuietly(fileReader); } } - protected YamlConfig createConfig() { - YamlConfig config = new YamlConfig(); - config.setClassTag(SpeciesProtocol.class.getSimpleName(), - SpeciesProtocol.class); - config.writeConfig.setAlwaysWriteClassname(false); - config.writeConfig.setWriteRootTags(false); - return config; - } - protected char getCsvSeparator() { return context.getConfig().getCsvSeparator(); } Modified: trunk/tutti-service/src/main/resources/i18n/tutti-service_fr_FR.properties =================================================================== --- trunk/tutti-service/src/main/resources/i18n/tutti-service_fr_FR.properties 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-service/src/main/resources/i18n/tutti-service_fr_FR.properties 2013-02-01 00:53:55 UTC (rev 281) @@ -3,6 +3,7 @@ tutti.config.data.directory=Répertoire de données de l'application. Vous pouvez utiliser l'expression ${tutti.data.directory} pour le référence dans d'autres propriétés de configuration (ex\: ${tutti.data.directory}/tmp). tutti.config.license.organizationName=Nom de l'organisation dans la licence tutti.config.tmp.directory=Répertoire temporaire utilisée par l'application (est nettoyé à chaque démarrage de l'application) +tutti.csv.separator= tutti.property.attachment=Pièce jointe tutti.property.caracteristic=Caractéristique tutti.property.codeMemo=Code Memo Modified: trunk/tutti-ui-swing/src/license/THIRD-PARTY.properties =================================================================== --- trunk/tutti-ui-swing/src/license/THIRD-PARTY.properties 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-ui-swing/src/license/THIRD-PARTY.properties 2013-02-01 00:53:55 UTC (rev 281) @@ -8,6 +8,7 @@ # - Common Public License Version 1.0 # - Eclipse Public License - v 1.0 # - GNU General Public License - Version 2 with the class path exception +# - GNU Library or Lesser General Public License # - General Public License (GPL) # - HSQLDB License # - LGPL 2.1 @@ -23,9 +24,8 @@ # Please fill the missing licenses for dependencies : # # -#Sat Jan 19 08:26:02 CET 2013 +#Fri Feb 01 01:12:25 CET 2013 antlr--antlr--2.7.6=BSD License commons-primitives--commons-primitives--1.0=The Apache Software License, Version 2.0 dom4j--dom4j--1.6.1=BSD License javax.transaction--jta--1.1=Common Development and Distribution License (CDDL) v1.0 -regexp--regexp--1.3=The Apache Software License, Version 2.0 Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java 2013-02-01 00:53:55 UTC (rev 281) @@ -1,5 +1,29 @@ package fr.ifremer.tutti.ui.swing.content.protocol; +/* + * #%L + * Tutti :: UI + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java 2013-02-01 00:53:55 UTC (rev 281) @@ -1,5 +1,29 @@ package fr.ifremer.tutti.ui.swing.content.protocol; +/* + * #%L + * Tutti :: UI + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java 2013-02-01 00:53:55 UTC (rev 281) @@ -1,5 +1,29 @@ package fr.ifremer.tutti.ui.swing.content.protocol; +/* + * #%L + * Tutti :: UI + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java 2013-02-01 00:53:55 UTC (rev 281) @@ -1,5 +1,29 @@ package fr.ifremer.tutti.ui.swing.content.protocol; +/* + * #%L + * Tutti :: UI + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; Modified: trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties =================================================================== --- trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties 2013-02-01 00:19:07 UTC (rev 280) +++ trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties 2013-02-01 00:53:55 UTC (rev 281) @@ -332,6 +332,7 @@ tutti.table.species.sampleCategory.header.weight=Poids (kg) tutti.timeeditor.H=H tutti.title.about=À propos de Tutti +tutti.title.choose.protocolCaracteristicExportFile= tutti.title.choose.protocolCaracteristicImportFile=Choisir le fichier des caractéristiques à importer tutti.title.choose.protocolExportFile=Choisir le fichier où exporter le protocole tutti.title.choose.protocolImportFile=Choisir le fichier du protocole à importer

1 0

r280 - trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/synchro
by tchemit＠users.forge.codelutin.com 01 Feb '13

01 Feb '13

Author: tchemit Date: 2013-02-01 01:19:07 +0100 (Fri, 01 Feb 2013) New Revision: 280 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/280 Log: fix date Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/synchro/ReferentialSynchronizeHelperTest.java Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/synchro/ReferentialSynchronizeHelperTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/synchro/ReferentialSynchronizeHelperTest.java 2013-01-31 15:40:58 UTC (rev 279) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/synchro/ReferentialSynchronizeHelperTest.java 2013-02-01 00:19:07 UTC (rev 280) @@ -661,11 +661,9 @@ } public static Date getDate(int year, int month, int day) { - Date fromDate = DateUtils.setYears( - DateUtils.setMonths( - DateUtils.setDays(new Date(), day), - month), - year); + Date fromDate = DateUtils.setYears(new Date(), year); + fromDate = DateUtils.setMonths(fromDate, month); + fromDate = DateUtils.setDays(fromDate, day); return fromDate; }

1 0

r279 - trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service
by blavenier＠users.forge.codelutin.com 31 Jan '13

31 Jan '13

Author: blavenier Date: 2013-01-31 16:40:58 +0100 (Thu, 31 Jan 2013) New Revision: 279 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/279 Log: Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java 2013-01-31 15:37:38 UTC (rev 278) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java 2013-01-31 15:40:58 UTC (rev 279) @@ -25,7 +25,6 @@ */ import fr.ifremer.adagio.core.service.ServiceLocator; -import fr.ifremer.adagio.core.service.technical.CacheService; import fr.ifremer.tutti.persistence.TuttiPersistence; import fr.ifremer.tutti.persistence.service.synchro.ReferentialSynchronizeService;

1 0

r278 - in trunk/tutti-persistence-adagio/src: main/java/fr/ifremer/tutti/persistence/service main/resources test/java/fr/ifremer/tutti/persistence/service
by blavenier＠users.forge.codelutin.com 31 Jan '13

31 Jan '13

Author: blavenier Date: 2013-01-31 16:37:38 +0100 (Thu, 31 Jan 2013) New Revision: 278 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/278 Log: ref refs #1920: [Persistence] Adagio Donnees thematiques - Configure cache on getAllFishingVessels as eternal (disk persistence) - Add impl in SpeciesBatchPersistenceService : getAllRootSpeciesbatch, getAllSpeciesBatch and saveSpeciesBatch - Remove ehcache.xml : now additional cache are include into applicationContext-service-tutti.xml Removed: trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java trunk/tutti-persistence-adagio/src/main/resources/applicationContext-service-tutti.xml trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceTest.java trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2013-01-31 15:37:38 UTC (rev 278) @@ -213,7 +213,7 @@ } @Override - @Cacheable(value = "allFishingVessel") + @Cacheable(value = "tuttiAllFishingVessel") public List<Vessel> getAllFishingVessel() { Iterator<Object[]> list = queryListWithStatus( "allVessels", Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2013-01-31 15:37:38 UTC (rev 278) @@ -25,10 +25,15 @@ */ import java.io.Serializable; +import java.text.MessageFormat; +import java.util.ArrayList; +import java.util.HashMap; import java.util.HashSet; import java.util.Iterator; import java.util.List; +import java.util.Map; import java.util.Set; +import java.util.logging.SimpleFormatter; import javax.annotation.Resource; @@ -41,6 +46,7 @@ import org.springframework.stereotype.Service; import com.google.common.base.Preconditions; +import com.google.common.collect.Lists; import com.google.common.collect.Sets; import fr.ifremer.adagio.core.dao.administration.user.DepartmentImpl; @@ -51,6 +57,7 @@ import fr.ifremer.adagio.core.dao.data.batch.CatchBatchImpl; import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; import fr.ifremer.adagio.core.dao.data.batch.SortingBatchDao; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatchImpl; import fr.ifremer.adagio.core.dao.data.batch.denormalized.DenormalizedBatch; import fr.ifremer.adagio.core.dao.data.batch.denormalized.DenormalizedBatchDao; import fr.ifremer.adagio.core.dao.data.batch.denormalized.DenormalizedBatchImpl; @@ -106,12 +113,71 @@ @Override public List<SpeciesBatch> getAllRootSpeciesBatch(String fishingOperationId) { - return null; + Iterator<Object[]> list = queryList("allRootSpeciesBatch", + "fishingOperationId", IntegerType.INSTANCE, Integer.valueOf(fishingOperationId), + "qualitativeIdSortingType", IntegerType.INSTANCE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); + + List<SpeciesBatch> result = new ArrayList<SpeciesBatch>(); + while (list.hasNext()) { + Object[] source = list.next(); + SpeciesBatch speciesBatch = loadSpeciesBatch(source, true); + result.add(speciesBatch); + } + + return result; } @Override public List<SpeciesBatch> getAllSpeciesBatch(String fishingOperationId) { - return null; + Iterator<Object[]> list = queryList("allSpeciesBatch", + "fishingOperationId", IntegerType.INSTANCE, Integer.valueOf(fishingOperationId)); + + List<SpeciesBatch> result = new ArrayList<SpeciesBatch>(); + List<SpeciesBatch> rootBatchs = new ArrayList<SpeciesBatch>(); + + Map<String, SpeciesBatch> batchMapById = new HashMap<String, SpeciesBatch>(); + Map<String, String> parentBatchMapById = new HashMap<String, String>(); + while (list.hasNext()) { + Object[] source = list.next(); + SpeciesBatch speciesBatch = loadSpeciesBatch(source, false); + batchMapById.put(speciesBatch.getId(), speciesBatch); + + Integer parentbatchId = (Integer)source[11]; + if (parentbatchId != null) { + parentBatchMapById.put(speciesBatch.getId(), parentbatchId.toString()); + } + } + + for (Iterator iterator = batchMapById.values().iterator(); iterator.hasNext();) { + SpeciesBatch speciesBatch = (SpeciesBatch) iterator.next(); + + // Retrieve the parent SpeciesBatch + String parentbatchId = parentBatchMapById.get(speciesBatch.getId()); + if (parentbatchId != null) { + SpeciesBatch parentSpeciesBatch = batchMapById.get(parentbatchId); + + // If found, link the batch with its parent : + if (parentSpeciesBatch != null) { + speciesBatch.setParentBatch(parentSpeciesBatch); + if (parentSpeciesBatch.getChildBatchs() == null) { + parentSpeciesBatch.setChildBatchs(Lists.newArrayList(speciesBatch)); + } + else { + parentSpeciesBatch.addChildBatchs(speciesBatch); + } + } + + // If no parent found = batch is a child of the catch batch + else { + rootBatchs.add(speciesBatch); + } + } + } + + // Apply inheritance, starting with the catch batch children + applyInheritedProperties(rootBatchs, null, null, result); + + return result; } @Override @@ -122,56 +188,8 @@ if (source == null) { throw new DataRetrievalFailureException("Could not retrieve speciesBatch with id=" + id); } - SpeciesBatch result = new SpeciesBatch(); - result.setId(id); - - int colIndex = 0; - // Individual count - result.setNumber((Integer)source[colIndex++]); - - // Weight & sampleCategory Weight - Float sampleWeight = (Float)source[colIndex++]; - Float samplingRatio = (Float)source[colIndex++]; - String samplingRatioText = (String)source[colIndex++]; - if (samplingRatio == null) { - result.setWeight(sampleWeight); - } - else { - String startStr = sampleWeight.toString().replace(',', '.') + "/"; - if (samplingRatioText != null && samplingRatioText.startsWith(startStr)) { - String weightStr = samplingRatioText.substring(startStr.length()); - if (weightStr != null && !weightStr.isEmpty()) { - result.setSampleCategoryWeight(sampleWeight); - result.setWeight(Float.parseFloat(weightStr)); - } - } - } - - // Comments - result.setComment((String)source[colIndex++]); - - // Sample category type - Integer pmfmId = (Integer)source[colIndex++]; - if (pmfmId != null) { - SampleCategoryEnum sampleCategory = measurementHelper.pmfmId2SampleCategory(pmfmId); - result.setSampleCategoryType(sampleCategory); - } - - // Sample category value - Integer qvValue = (Integer)source[colIndex++]; - Float numValue = (Float)source[colIndex++]; - String alphaValue = (String)source[colIndex++]; - Serializable value = (qvValue!=null)?qvValue.toString():((numValue!=null)?numValue:alphaValue); - result.setSampleCategoryValue(value); - - // Species - Integer referenceTaxonId = (Integer)source[colIndex++]; - if (referenceTaxonId !=null) { - Species species = new Species(); - species.setId(referenceTaxonId.toString()); - result.setSpecies(species); - } - + + SpeciesBatch result = loadSpeciesBatch(source, true); return result; } @@ -182,6 +200,10 @@ Preconditions.checkArgument(bean.getId() == null); Preconditions.checkNotNull(bean.getSpecies()); Preconditions.checkNotNull(bean.getSpecies().getId()); + Preconditions.checkNotNull(bean.getFishingOperation()); + Preconditions.checkNotNull(bean.getFishingOperation().getId()); + // TODO BLA uncomment this after v1.0 : + // Preconditions.checkNotNull(bean.getCatchBatch()); SortingBatch batch = SortingBatch.Factory.newInstance(); beanToEntity(bean, batch, parentBatchId, true); @@ -241,48 +263,23 @@ // TODO BLA : prendre le service du 1er saisisseur ? Integer recorderDepartmentId = enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; - // Retrieve entity Root batch - //source.getFishingOperation().get - Integer fishingOperationId = Integer.valueOf(source.getFishingOperation().getId()); - Integer rootBatchId = getRootBatchId(fishingOperationId); - if (rootBatchId == null) { - CatchBatch rootBatch = CatchBatch.Factory.newInstance(); - rootBatch.setFishingOperation(load(FishingOperationImpl.class, fishingOperationId)); - rootBatch.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - rootBatch.setRankOrder((short)1); - rootBatch.setSynchronizationStatus(SynchronizationStatus.DIRTY.getValue()); - rootBatch = catchBatchDao.create(rootBatch); - rootBatchId = rootBatch.getId(); - target.setRootBatch(rootBatch); - - //fr.ifremer.adagio.core.dao.data.operation.FishingOperation operation = load(FishingOperationImpl.class, fishingOperationId); - //operation.setCatchBatch(rootBatch); - getCurrentSession().flush(); - int rowUpdated = queryUpdate("updateFishingOperationCatchBatch", - "fishingOperationId", IntegerType.INSTANCE, fishingOperationId, - "catchBatchId", IntegerType.INSTANCE, rootBatchId); - if (rowUpdated == 0) { - throw new DataIntegrityViolationException("Could not attach catch batch to the given operation : operation was not found."); - } - } - else { - target.setRootBatch(load(CatchBatchImpl.class, Integer.valueOf(rootBatchId))); - } - // Parent batch - Integer targetParentBatchId = null;; - if (parentBatchId == null || parentBatchId.isEmpty()) { - targetParentBatchId = rootBatchId; - } - else { - targetParentBatchId = Integer.valueOf(parentBatchId); + // Create lists to store all updates, then remove not updated items + Set<QuantificationMeasurement> notChangedQuantificationMeasurements = new HashSet<QuantificationMeasurement>(); + if (target.getQuantificationMeasurements() != null) { + notChangedQuantificationMeasurements.addAll(target.getQuantificationMeasurements()); + } + Set<SortingMeasurement> notChangedSortingMeasurements = new HashSet<SortingMeasurement>(); + if (target.getSortingMeasurements() != null) { + notChangedSortingMeasurements.addAll(target.getSortingMeasurements()); + } + + // If parent and root need to be set + if (target.getId() == null + || target.getRootBatch() == null + || (target.getParentBatch() != null && !target.getParentBatch().getId().equals(parentBatchId))) { + setBatchParents(source, target, parentBatchId, notChangedSortingMeasurements); } - if (copyIfNull && targetParentBatchId == null) { - target.setParentBatch(null); - } - else if (targetParentBatchId != null){ - target.setParentBatch(load(BatchImpl.class, targetParentBatchId)); - } // RankOrder if (target.getRankOrder() == null) { @@ -293,16 +290,6 @@ } target.setRankOrder(rankOrder); } - - // Create lists to store all updates, then remove not updated items - Set<QuantificationMeasurement> notChangedQuantificationMeasurements = new HashSet<QuantificationMeasurement>(); - if (target.getQuantificationMeasurements() != null) { - notChangedQuantificationMeasurements.addAll(target.getQuantificationMeasurements()); - } - Set<SortingMeasurement> notChangedSortingMeasurements = new HashSet<SortingMeasurement>(); - if (target.getSortingMeasurements() != null) { - notChangedSortingMeasurements.addAll(target.getSortingMeasurements()); - } // Weight or SampleCategoryWeight if (copyIfNull && source.getWeight() == null) { @@ -329,13 +316,17 @@ target.setSamplingRatio(source.getSampleCategoryWeight().floatValue() / source.getWeight().floatValue()); } - // SampleCategoryWeight + // Sorting measurement if (copyIfNull && (source.getSampleCategoryType() == null || source.getSampleCategoryValue() == null)) { // Nothing to do : will be removed later, using notChangedSortingMeasurements } else if (source.getSampleCategoryType() != null && source.getSampleCategoryValue() != null) { - SortingMeasurement sortingMeasurement = measurementHelper.setSortingMeasurement(target, recorderDepartmentId, source.getSampleCategoryType(), source.getSampleCategoryValue()); - notChangedSortingMeasurements.remove(sortingMeasurement); + Integer pmfmId = measurementHelper.sampleCategory2PmfmId(source.getSampleCategoryType()); + // Do not store sorting measurement if pmfm = SORTED (already store in an ancestor batch) + if (!pmfmId.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + SortingMeasurement sortingMeasurement = measurementHelper.setSortingMeasurement(target, recorderDepartmentId, source.getSampleCategoryType(), source.getSampleCategoryValue()); + notChangedSortingMeasurements.remove(sortingMeasurement); + } } // Individual count @@ -384,11 +375,153 @@ } } - public Integer getRootBatchId(Integer fishingOperationId) { - Integer catchBatchId = queryUniqueTyped("fishingOperationCatchBatch", - "fishingOperationId", IntegerType.INSTANCE, fishingOperationId); - return catchBatchId; + public void setBatchParents(SpeciesBatch source, SortingBatch target, String parentBatchIdStr, + Set<SortingMeasurement> notChangedSortingMeasurements) { + + Preconditions.checkNotNull(target); + Preconditions.checkNotNull(source.getFishingOperation()); + Preconditions.checkNotNull(source.getFishingOperation().getId()); + + // Retrieve parent and root batch + if (parentBatchIdStr == null) { + // Retrieve category type + Integer pmfmId = measurementHelper.sampleCategory2PmfmId(source.getSampleCategoryType()); + if (pmfmId == null || !pmfmId.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + throw new DataIntegrityViolationException(MessageFormat.format("A species batch with no parent should have a sampleCategoryType with id={0}.", + new Object[]{enumeration.PMFM_ID_SORTED_UNSORTED})); + } + Integer qualitativeValueId = Integer.valueOf(source.getSampleCategoryValue().toString()); + + Object[] cols = queryUnique("parentBatch", + "fishingOperationId", IntegerType.INSTANCE, Integer.valueOf(source.getFishingOperation().getId()), + "pmfmIdSorted", IntegerType.INSTANCE, enumeration.PMFM_ID_SORTED_UNSORTED, + "qualitativeIdSorted", IntegerType.INSTANCE, qualitativeValueId, + "pmfmIdSortingType", IntegerType.INSTANCE, enumeration.PMFM_ID_SORTING_TYPE, + "qualitativeIdSortingType", IntegerType.INSTANCE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); + + // Parent Batch + Integer parentBatchId = (Integer)cols[0]; + SortingBatch parentBatch = load(SortingBatchImpl.class, parentBatchId); + target.setParentBatch(parentBatch); + + // Root Batch + Integer rootBatchId = (Integer)cols[1]; + target.setRootBatch(load(CatchBatchImpl.class, rootBatchId)); + } + + // Load existing parent and root + else { + SortingBatch parentBatch = load(SortingBatchImpl.class, Integer.valueOf(parentBatchIdStr)); + target.setParentBatch(parentBatch); + target.setRootBatch(parentBatch.getRootBatch()); + } } + + protected SpeciesBatch loadSpeciesBatch(Object[] source, boolean sourceHasPmfmGrandParent) { + int colIndex = 0; + + SpeciesBatch result = new SpeciesBatch(); + result.setId(source[colIndex++].toString()); + + // Individual count + result.setNumber((Integer)source[colIndex++]); + + // Weight & sampleCategory Weight + Float sampleWeight = (Float)source[colIndex++]; + Float samplingRatio = (Float)source[colIndex++]; + String samplingRatioText = (String)source[colIndex++]; + if (samplingRatio == null) { + result.setWeight(sampleWeight); + } + else if (sampleWeight != null){ + String startStr = sampleWeight.toString().replace(',', '.') + "/"; + if (samplingRatioText != null && samplingRatioText.startsWith(startStr)) { + String weightStr = samplingRatioText.substring(startStr.length()); + if (weightStr != null && !weightStr.isEmpty()) { + result.setSampleCategoryWeight(sampleWeight); + result.setWeight(Float.parseFloat(weightStr)); + } + } + } + // Comments + result.setComment((String)source[colIndex++]); + + // Sample category type + Integer pmfmId = (Integer)source[colIndex++]; + + // Sample category value + Integer qvValue = (Integer)source[colIndex++]; + Float numValue = (Float)source[colIndex++]; + String alphaValue = (String)source[colIndex++]; + Serializable value = (qvValue!=null)?qvValue.toString():((numValue!=null)?numValue:alphaValue); + // Species + Integer referenceTaxonId = (Integer)source[colIndex++]; + if (referenceTaxonId !=null) { + Species species = new Species(); + species.setId(referenceTaxonId.toString()); + result.setSpecies(species); + } + + if (sourceHasPmfmGrandParent && colIndex == source.length-2) { + Integer pmfmIdGrandFather = (Integer)source[colIndex++]; + Integer qualitativeIdGrandFather = (Integer)source[colIndex++]; + + if (pmfmId != null && value != null) { + SampleCategoryEnum sampleCategory = measurementHelper.pmfmId2SampleCategory(pmfmId); + result.setSampleCategoryType(sampleCategory); + result.setSampleCategoryValue(value); + } + + // When no sorting measurement found, retrieve the sorted/unsorted from an ancestor batch + else { + if (referenceTaxonId != null + && enumeration.PMFM_ID_SORTED_UNSORTED.equals(pmfmIdGrandFather) + && qualitativeIdGrandFather != null){ + result.setSampleCategoryType(SampleCategoryEnum.sortedUnsorted); + result.setSampleCategoryValue(qualitativeIdGrandFather.toString()); + } + else { + // TODO TC : manage this exception in the UI => 'format des captures incompatibles avec tutti...' + // TODO TC : add a throws 'InvalidBatchTreeException' in the interface method ? + throw new DataRetrievalFailureException("Invalid batch tree found in database (no sample category Vrac/HorsVrac found in parents) : could not be load batch with id=" + result.getId()); + } + } + } + + return result; + } + + protected void applyInheritedProperties(List<SpeciesBatch> speciesBatchs, Serializable inheritedSampleCategoryValue, Species inheritedSpecies, List<SpeciesBatch> result) { + if (speciesBatchs == null || speciesBatchs.size() == 0) { + return; + } + boolean hasAppliedCategoryValue = false; + for (Iterator iterator = speciesBatchs.iterator(); iterator.hasNext();) { + SpeciesBatch speciesBatch = (SpeciesBatch) iterator.next(); + + if (speciesBatch.getSpecies() != null && speciesBatch.getSampleCategoryType() == null) { + speciesBatch.setSampleCategoryType(SampleCategoryEnum.sortedUnsorted); + speciesBatch.setSampleCategoryValue(inheritedSampleCategoryValue); + hasAppliedCategoryValue = true; + + // Remove the link to the parent (not need after inheritance) + speciesBatch.setParentBatch(null); + } + else if (speciesBatch.getSpecies() == null && inheritedSpecies != null) { + speciesBatch.setSpecies(inheritedSpecies); + } + + // Store into result list only if species has been set (ignore upper batch) + if (speciesBatch.getSpecies() != null) { + result.add(speciesBatch); + } + + // Recursive call : propage species but not category if already applied + applyInheritedProperties(speciesBatch.getChildBatchs(), + (hasAppliedCategoryValue ? null : inheritedSampleCategoryValue), + speciesBatch.getSpecies(), result); + } + } } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java 2013-01-31 15:37:38 UTC (rev 278) @@ -25,6 +25,7 @@ */ import fr.ifremer.adagio.core.service.ServiceLocator; +import fr.ifremer.adagio.core.service.technical.CacheService; import fr.ifremer.tutti.persistence.TuttiPersistence; import fr.ifremer.tutti.persistence.service.synchro.ReferentialSynchronizeService; @@ -118,7 +119,7 @@ return instance().getService("referentialSynchronizeService", ReferentialSynchronizeService.class); } - + public static void close() { instance().shutdown(); } Modified: trunk/tutti-persistence-adagio/src/main/resources/applicationContext-service-tutti.xml =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/applicationContext-service-tutti.xml 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/main/resources/applicationContext-service-tutti.xml 2013-01-31 15:37:38 UTC (rev 278) @@ -37,4 +37,30 @@ <bean id="tuttiEnumerationFile" init-method="init" class="fr.ifremer.tutti.persistence.service.TuttiEnumerationFile"/> +  + <bean id="tuttiAbstractCache" abstract="true" class="org.springframework.cache.ehcache.EhCacheFactoryBean"> + <property name="cacheManager" ref="ehcache"/> + <property name="maxElementsInMemory" value="5000"/> + <property name="eternal" value="false"/> + <property name="timeToLive" value="300"/> + <property name="timeToIdle" value="300"/> + <property name="overflowToDisk" value="false"/> + <property name="diskPersistent" value="false"/> + <property name="diskExpiryThreadIntervalSeconds" value="300"/> + </bean> + + <bean id="tuttiAllFishingVesselCache" parent="tuttiAbstractCache"> + <property name="cacheName" value="tuttiAllFishingVessel" /> + <property name="eternal" value="true"/> + <property name="overflowToDisk" value="true"/> + <property name="diskPersistent" value="true"/> +  + <property name="timeToLive" value="0"/> + <property name="timeToIdle" value="0"/> + </bean> + +  + </beans> \ No newline at end of file Deleted: trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml 2013-01-31 15:37:38 UTC (rev 278) @@ -1,86 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> - - -<ehcache xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" - xsi:schemaLocation="http://ehcache.org/ehcache.xsd" - updateCheck="false"> - -  - <diskStore path="java.io.tmpdir/ehcache"/> - -  - <defaultCache - maxElementsInMemory="10000" - eternal="false" - timeToIdleSeconds="120" - timeToLiveSeconds="120" - overflowToDisk="true" /> - -  - <cache name="allFishingVessel" eternal="true" - maxElementsInMemory="1" - memoryStoreEvictionPolicy="LFU"/> - - <cache name="org.hibernate.cache.UpdateTimestampsCache" - maxElementsInMemory="5000" timeToIdleSeconds="300" - timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" - diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> - - <cache name="org.hibernate.cache.StandardQueryCache" - maxElementsInMemory="10000" eternal="false" timeToIdleSeconds="300" - timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" - diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> - -</ehcache> \ No newline at end of file Modified: trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml 2013-01-31 15:37:38 UTC (rev 278) @@ -46,7 +46,7 @@ </query>  - <query cacheable="true" name="allCruises"> + <query name="allCruises"> <![CDATA[ SELECT c.id, @@ -63,7 +63,7 @@ </query>  - <query cacheable="true" name="program"> + <query name="program"> <![CDATA[ SELECT p.code, @@ -78,7 +78,7 @@ </query>  - <query cacheable="true" name="allProgramLocations"> + <query name="allProgramLocations"> <![CDATA[ SELECT l.id, @@ -94,7 +94,7 @@ </query>  - <query cacheable="true" name="cruise"> + <query name="cruise"> <![CDATA[ SELECT sc.program.code AS programCode, @@ -123,7 +123,7 @@ <query-param name="countryLocationLevelId" type="java.lang.Integer"/> </query> - <query cacheable="true" name="allCruiseGears"> + <query name="allCruiseGears"> <![CDATA[ SELECT gpf.gear.id AS gearId, @@ -148,7 +148,7 @@ <query-param name="pmfmIdTrawlNet" type="java.lang.Integer"/> </query> - <query cacheable="true" name="allCruiseSecondaryVessels"> + <query name="allCruiseSecondaryVessels"> <![CDATA[ SELECT va.operationVesselAssociationPk.vessel.code AS associatedVesselCode @@ -165,7 +165,7 @@ <query-param name="cruiseId" type="java.lang.Integer"/> </query> - <query cacheable="true" name="allFishingOperations"> + <query name="allFishingOperations"> <![CDATA[ SELECT o.id AS id, @@ -188,7 +188,7 @@ <query-param name="pmfmIdMultirigAggregation" type="java.lang.Integer"/> </query> - <query cacheable="true" name="fishingOperation"> + <query name="fishingOperation"> <![CDATA[ SELECT o.name AS name, @@ -218,7 +218,7 @@ <query-param name="locationLevelIdLocalite" type="java.lang.Integer"/> </query> - <query cacheable="true" name="fishingOperationRankOrder"> + <query name="fishingOperationRankOrder"> <![CDATA[ SELECT count(o1.id)+1 as fishingOperationRankOrder @@ -235,7 +235,7 @@ - <query cacheable="true" name="fishingOperationEnvironment"> + <query name="fishingOperationEnvironment"> <![CDATA[ SELECT vum.pmfm.id as pmfmId, @@ -251,7 +251,7 @@ <query-param name="fishingOperationId" type="java.lang.Integer"/> </query> - <query cacheable="true" name="fishingOperationGearShooting"> + <query name="fishingOperationGearShooting"> <![CDATA[ SELECT gum.pmfm.id as pmfmId, @@ -278,7 +278,7 @@ <query-param name="catchBatchId" type="java.lang.Integer"/> </query> - <query cacheable="true" name="catchBatch"> + <query name="catchBatch"> <![CDATA[ SELECT cb.id AS catchBatchId, @@ -304,83 +304,130 @@ ) ORDER BY b1.id, b2.id ]]> -  + AND sm2.qualitativeValue.id=:qualitativeIdSortingType + ]]> <query-param name="fishingOperationId" type="java.lang.Integer"/> <query-param name="pmfmIdSorted" type="java.lang.Integer"/> + <query-param name="qualitativeIdSorted" type="java.lang.Integer"/> <query-param name="pmfmIdSortingType" type="java.lang.Integer"/> - </query> + <query-param name="qualitativeIdSortingType" type="java.lang.Integer"/> + </query> -  - - <query cacheable="true" name="speciesBatch"> - <![CDATA[ SELECT + b.id AS batchId, b.individualCount AS individualCount, qm.numericalValue AS weight, b.samplingRatio AS samplingRatio, b.samplingRatioText AS samplingRatioText, b.comments AS comments, - sm.pmfm.id as pmfmId, + sm.pmfm.id AS pmfmId, sm.qualitativeValue.id as qvValue, sm.numericalValue AS numValue, sm.alphanumericalValue AS alphaValue, - b.referenceTaxon.id as referenceTaxonId + b.referenceTaxon.id AS referenceTaxonId, + smSorted.pmfm.id AS pmfmIdGrandFather, + smSorted.qualitativeValue.id AS qualitativeIdGrandFather FROM - SortingBatchImpl b - LEFT OUTER JOIN b.sortingMeasurements sm - LEFT OUTER JOIN b.quantificationMeasurements qm + SortingBatchImpl b + INNER JOIN b.parentBatch batchSortingType + INNER JOIN batchSortingType.parentBatch batchSorted + LEFT OUTER JOIN batchSorted.sortingMeasurements smSorted + LEFT OUTER JOIN b.sortingMeasurements sm + LEFT OUTER JOIN b.quantificationMeasurements qm WHERE b.id = :batchId AND ( Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceTest.java 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceTest.java 2013-01-31 15:37:38 UTC (rev 278) @@ -25,6 +25,8 @@ */ import com.google.common.base.Preconditions; + +import fr.ifremer.adagio.core.service.technical.CacheService; import fr.ifremer.tutti.persistence.DatabaseResource; import fr.ifremer.tutti.persistence.TuttiPersistenceDevImpl; import fr.ifremer.tutti.persistence.config.TuttiPersistenceDevConfig; @@ -68,6 +70,8 @@ protected static TuttiPersistenceDevImpl storage; protected ReferentialPersistenceService service; + + protected CacheService cacheService; @BeforeClass public static void beforeClass() throws IOException { @@ -114,6 +118,10 @@ @Before public void setUp() throws Exception { service = TuttiPersistenceServiceLocator.getReferentialPersistenceService(); + cacheService = TuttiPersistenceServiceLocator.instance().getCacheService(); + + // This is need for test : getAllFishingVessel() + cacheService.clearAllCaches(); } @Test @@ -199,13 +207,23 @@ assertSize(result, storage.getAllScientificVessel()); } - //FIXME : requete trop longue (index manquant, trop de jointures?) @Test - @Ignore public void getAllFishingVessel() { + long time = System.currentTimeMillis(); List<Vessel> result = service.getAllFishingVessel(); + long delta1 = System.currentTimeMillis() - time; + Assert.assertNotNull(result); - Assert.assertEquals(31620, result.size()); + Assert.assertEquals(24805, result.size()); + + // try again, to check cache is enable + time = System.currentTimeMillis(); + result = service.getAllFishingVessel(); + long delta2 = System.currentTimeMillis() - time; + + float reduceFactor = delta2 * 100 / delta1; + Assert.assertTrue("The cache on getAllFishingVessel() should have speed up more than factor 10. Make sure EhCache is well configured.", reduceFactor < 0.1); + persistList(Vessel.class, "Fishing", result); assertSize(result, storage.getAllFishingVessel()); } Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java 2013-01-31 15:26:25 UTC (rev 277) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java 2013-01-31 15:37:38 UTC (rev 278) @@ -30,6 +30,7 @@ import java.util.List; import fr.ifremer.tutti.persistence.DatabaseResource; +import fr.ifremer.tutti.persistence.entities.data.CatchBatch; import fr.ifremer.tutti.persistence.entities.data.Cruise; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryEnum; @@ -47,7 +48,6 @@ * @author tchemit <chemit(a)codelutin.com> * @since 0.3 */ -@Ignore public class SpeciesBatchPersistenceServiceTest { @ClassRule @@ -57,18 +57,23 @@ protected CruisePersistenceService cruiseService; protected FishingOperationPersistenceService fishingOperationService; + protected CatchBatchPersistenceService catchBatchService; protected ReferentialPersistenceService referentialService; protected Cruise cruise; protected FishingOperation fishingOperation; + protected CatchBatch catchBacth; protected List<Species> species; + protected String speciesBacthId = null; + @Before public void setUp() throws Exception { service = TuttiPersistenceServiceLocator.getSpeciesBatchPersistenceService(); cruiseService = TuttiPersistenceServiceLocator.getCruisePersistenceService(); fishingOperationService = TuttiPersistenceServiceLocator.getFishingOperationPersistenceService(); referentialService = TuttiPersistenceServiceLocator.getReferentialPersistenceService(); + catchBatchService = TuttiPersistenceServiceLocator.getCatchBatchPersistenceService(); cruise = cruiseService.getCruise(dbResource.getFixtures().cruiseId()); cruise.setId(null); @@ -96,6 +101,10 @@ fishingOperation.setGearShootingEndDate(calendar.getTime()); fishingOperation = fishingOperationService.createFishingOperation(fishingOperation); + + catchBacth = new CatchBatch(); + catchBacth.setFishingOperation(fishingOperation); + catchBacth = catchBatchService.createCatchBatch(catchBacth); species = referentialService.getAllSpecies(); assertNotNull(species); @@ -103,73 +112,46 @@ } @Test - @Ignore - public void getAllRootSpeciesBatch(/*String fishingOperationId*/) { - - List<SpeciesBatch> speciesBatch = service.getAllRootSpeciesBatch(fishingOperation.getId()); - assertNotNull(speciesBatch); - assertTrue(speciesBatch.size() > 0); - - } - - @Test - public void getAllSpeciesBatch(/*String fishingOperationId*/) { - - } - - @Test - public void getSpeciesBatch(/*String id*/) { - - } - - @Test public void createSpeciesBatch(/*SpeciesBatch bean, String parentBatchId*/) { Caracteristic sortedUnsortedPMFM = referentialService.getSortedUnsortedCaracteristic(); String horsVracQualitativeValueId = sortedUnsortedPMFM.getQualitativeValue(0).getId(); String vracQualitativeValueId = sortedUnsortedPMFM.getQualitativeValue(1).getId(); + Caracteristic maturityPMFM = referentialService.getMaturityCaracteristic(); + String firstMaturityQualitativeValueId = maturityPMFM.getQualitativeValue(0).getId(); Species taxon1 = species.get(0); Species taxon2 = species.get(1); Caracteristic sexPMFM = referentialService.getSexCaracteristic(); String maleQualitativeValueId = sexPMFM.getQualitativeValue(1).getId(); String femaleQualitativeValueId = sexPMFM.getQualitativeValue(2).getId(); + String unkQualitativeValueId = sexPMFM.getQualitativeValue(3).getId(); SpeciesBatch esp1Batch = null; + SpeciesBatch esp2Batch = null; SpeciesBatch batch = null; - SpeciesBatch createdBatch = null; - SpeciesBatch reloadedBatch = null; // ----------------------------------------------------------------------------- // 1. Test with only mandatory properties // ----------------------------------------------------------------------------- // batch : "ESP1 - Vrac/5" batch = new SpeciesBatch(); + batch.setParentBatch(null); batch.setFishingOperation(fishingOperation); + // TODO TC : add link between Speciesbatch and CatchBatch + //batch.setCatchBatch(catchBatch); batch.setSpecies(taxon1); batch.setSampleCategoryType(SampleCategoryEnum.sortedUnsorted); batch.setSampleCategoryValue(vracQualitativeValueId); batch.setWeight(5f); - createdBatch = service.createSpeciesBatch(batch, null); - assertNotNull(createdBatch); - assertNotNull(createdBatch.getId()); - reloadedBatch = service.getSpeciesBatch(createdBatch.getId()); - assertNotNull(reloadedBatch); - assertNull(reloadedBatch.getFishingOperation()); - assertEquals(createdBatch.getId(), reloadedBatch.getId()); - assertEquals(batch.getWeight(), reloadedBatch.getWeight()); - assertEquals(batch.getNumber(), reloadedBatch.getNumber()); - assertEquals(batch.getComment(), reloadedBatch.getComment()); - assertEquals(batch.getSampleCategoryType(), reloadedBatch.getSampleCategoryType()); - assertEquals(batch.getSampleCategoryValue(), reloadedBatch.getSampleCategoryValue()); - assertNotNull(reloadedBatch.getSpecies()); - assertEquals(batch.getSpecies().getId(), reloadedBatch.getSpecies().getId()); + assertCreateAndReloadSpeciesBatch(batch, null); // Save ESP1 batch - esp1Batch = reloadedBatch; + esp1Batch = batch; // ----------------------------------------------------------------------------- // 2. Test child "Male/2" // ----------------------------------------------------------------------------- // Batch : ESP1 - Vrac/5 Male/2 ss-ech/1 Nombre/7 + batch = new SpeciesBatch(); batch.setId(null); batch.setParentBatch(esp1Batch); batch.setSpecies(taxon1); @@ -180,22 +162,13 @@ batch.setSampleCategoryWeight(1f); batch.setNumber(7); - createdBatch = service.createSpeciesBatch(batch, batch.getParentBatch().getId()); - assertNotNull(createdBatch); - assertNotNull(createdBatch.getId()); - reloadedBatch = service.getSpeciesBatch(createdBatch.getId()); - assertNotNull(reloadedBatch); - assertNull(reloadedBatch.getParentBatch()); - assertEquals(batch.getNumber(), reloadedBatch.getNumber()); - assertEquals(batch.getSampleCategoryType(), reloadedBatch.getSampleCategoryType()); - assertEquals(batch.getSampleCategoryValue(), reloadedBatch.getSampleCategoryValue()); - assertEquals(batch.getWeight(), reloadedBatch.getWeight()); - assertEquals(batch.getSampleCategoryWeight(), reloadedBatch.getSampleCategoryWeight()); + assertCreateAndReloadSpeciesBatch(batch, batch.getParentBatch().getId()); // ----------------------------------------------------------------------------- // 3. Test child "Female/2" // ----------------------------------------------------------------------------- // Batch : ESP1 - Vrac/5 Female/3 Nombre/14 + batch = new SpeciesBatch(); batch.setId(null); batch.setParentBatch(esp1Batch); batch.setSpecies(taxon1); @@ -206,42 +179,144 @@ batch.setSampleCategoryWeight(null); batch.setNumber(14); - createdBatch = service.createSpeciesBatch(batch, batch.getParentBatch().getId()); - assertNotNull(createdBatch); - assertNotNull(createdBatch.getId()); - reloadedBatch = service.getSpeciesBatch(createdBatch.getId()); - assertNotNull(reloadedBatch); - assertNull(reloadedBatch.getParentBatch()); - assertEquals(batch.getNumber(), reloadedBatch.getNumber()); - assertEquals(batch.getSampleCategoryType(), reloadedBatch.getSampleCategoryType()); - assertEquals(batch.getSampleCategoryValue(), reloadedBatch.getSampleCategoryValue()); - assertEquals(batch.getWeight(), reloadedBatch.getWeight()); - assertEquals(batch.getSampleCategoryWeight(), reloadedBatch.getSampleCategoryWeight()); + assertCreateAndReloadSpeciesBatch(batch, batch.getParentBatch().getId()); + + // ----------------------------------------------------------------------------- + // 4. Test : ESP2 - Vrac/7 + // \- ESP2 - Vrac/7 UNK/2 ss-ech/1 Nombre/11 + // ----------------------------------------------------------------------------- + // batch : "ESP2 - Vrac/7 " + batch = new SpeciesBatch(); + batch.setParentBatch(null); + // TODO TC : add link between Speciesbatch and CatchBatch + //batch.setCatchBatch(catchBatch); + batch.setSpecies(taxon2); + batch.setSampleCategoryType(SampleCategoryEnum.sortedUnsorted); + batch.setSampleCategoryValue(vracQualitativeValueId); + batch.setWeight(7f); + assertCreateAndReloadSpeciesBatch(batch, null); + esp2Batch = batch; - /* - reloadedBatch.setSampleCategoryWeight(1.5f); - reloadedBatch.setParentBatch(createdBatch.getParentBatch()); - reloadedBatch.setFishingOperation(fishingOperation); - service.saveSpeciesBatch(reloadedBatch); - */ + // Batch : ESP2 - Vrac/7 UNK/2 ss-ech/1 Nombre/11 + batch = new SpeciesBatch(); + batch.setId(null); + batch.setParentBatch(esp2Batch); + batch.setSpecies(taxon1); + batch.setComment("ESP2 - Vrac/7 UNK/2 ss-ech/1 Nombre/11"); + batch.setSampleCategoryType(SampleCategoryEnum.maturity); + batch.setSampleCategoryValue(firstMaturityQualitativeValueId); + batch.setWeight(2f); + batch.setSampleCategoryWeight(1f); + batch.setNumber(11); + + assertCreateAndReloadSpeciesBatch(batch, batch.getParentBatch().getId()); + + // ----------------------------------------------------------------------------- + // 5. Test save after modifications + // ----------------------------------------------------------------------------- + // Batch : ESP2 - Vrac/7 UNK/1.75 ss-ech/1.11 Nombre/99 + batch.setSampleCategoryType(SampleCategoryEnum.sex); + batch.setSampleCategoryValue(unkQualitativeValueId); + batch.setComment("ESP2 - Vrac/7 UNK/1.75 ss-ech/1.11 Nombre/99"); + batch.setWeight(1.75f); + batch.setSampleCategoryWeight(1.11f); + batch.setFishingOperation(fishingOperation); + batch.setNumber(99); + + // Save and reload, then check + SpeciesBatch savedBatch = service.saveSpeciesBatch(batch); + assertSpeciesBatch(savedBatch, batch, false); + SpeciesBatch reloadedBatch = service.getSpeciesBatch(savedBatch.getId()); + assertSpeciesBatch(reloadedBatch, savedBatch, true); + + // ----------------------------------------------------------------------------- + // 6. Test get all root species + // ----------------------------------------------------------------------------- + List<SpeciesBatch> rootSpeciesBatch = service.getAllRootSpeciesBatch(fishingOperation.getId()); + assertNotNull(rootSpeciesBatch); + assertEquals(2, rootSpeciesBatch.size()); + + // ----------------------------------------------------------------------------- + // 4. Test get all species + // ----------------------------------------------------------------------------- + List<SpeciesBatch> allSpeciesBatch = service.getAllSpeciesBatch(fishingOperation.getId()); + assertNotNull(allSpeciesBatch); + assertEquals(5, allSpeciesBatch.size()); } @Test + @Ignore public void saveSpeciesBatch(/*SpeciesBatch bean*/) { + + } + + @Test + @Ignore + public void getSpeciesBatch(/*String id*/) { + if (speciesBacthId == null) return; + SpeciesBatch batch = service.getSpeciesBatch(speciesBacthId); + assertNotNull(batch); } @Test + @Ignore + public void getAllSpeciesBatch(/*String fishingOperationId*/) { + + } + @Test + @Ignore + public void getAllRootSpeciesBatch(/*String fishingOperationId*/) { + } + + @Test + @Ignore public void deleteSpeciesBatch(/*String id*/) { } @Test + @Ignore public void deleteSpeciesSubBatch(/*String id*/) { } @Test + @Ignore public void getAllSpeciesBatchFrequency(/*String speciesBatchId*/) { } + + protected void assertCreateAndReloadSpeciesBatch(SpeciesBatch batch, String parentBatchId) { + batch.setFishingOperation(fishingOperation); + + // Create batch + SpeciesBatch createdBatch = service.createSpeciesBatch(batch, parentBatchId); + assertSpeciesBatch(createdBatch, batch, false); + + // then reload (for round trip check) + SpeciesBatch reloadedBatch = service.getSpeciesBatch(createdBatch.getId()); + assertNull(reloadedBatch.getParentBatch()); + assertSpeciesBatch(reloadedBatch, batch, false); + + batch.setId(createdBatch.getId()); + } + + protected void assertSpeciesBatch(SpeciesBatch expectedBatch, SpeciesBatch actualBatch, boolean assertIdEquals) { + assertNotNull(actualBatch); + assertNotNull(actualBatch.getId()); + if (assertIdEquals && expectedBatch.getId() != null) { + assertEquals(expectedBatch.getId(), actualBatch.getId()); + } + assertEquals(expectedBatch.getWeight(), actualBatch.getWeight()); + assertEquals(expectedBatch.getSampleCategoryType(), actualBatch.getSampleCategoryType()); + assertEquals(expectedBatch.getSampleCategoryValue(), actualBatch.getSampleCategoryValue()); + assertEquals(expectedBatch.getSampleCategoryWeight(), actualBatch.getSampleCategoryWeight()); + assertEquals(expectedBatch.getNumber(), actualBatch.getNumber()); + assertEquals(expectedBatch.getComment(), actualBatch.getComment()); + if (expectedBatch.getSpecies() != null){ + assertNotNull(actualBatch.getSpecies()); + assertEquals(expectedBatch.getSpecies().getId(), actualBatch.getSpecies().getId()); + } + } + }

1 0

r277 - in trunk: tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure tutti-persistence-adagio/src/main/resources tutti-service tutti-service/src/main/java/fr/ifremer/tutti/service tutti-service/src/main/java/fr/ifremer/tutti/service/config tutti-service/src/main/java/fr/ifremer/tutti/service/protocol tutti-service/src/test/java/fr/ifremer/tutti/service tutti-service/src/test/java/fr/ifremer/
by tchemit＠users.forge.codelutin.com 31 Jan '13

31 Jan '13

Author: tchemit Date: 2013-01-31 16:26:25 +0100 (Thu, 31 Jan 2013) New Revision: 277 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/277 Log: refs #1819: [PROTOCOLE] - Gestion des listes pr?\195?\169f?\195?\169r?\195?\169es / r?\195?\169f?\195?\169rentiel (import / export des caract?\195?\169ristiques) Added: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicRow.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicType.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicExportModel.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicImportModel.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/protocol/ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportServiceTest.java trunk/tutti-service/src/test/resources/log4j.properties trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java Removed: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/TuttiProtocolImportExportService.java trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/TuttiProtocolImportExportServiceTest.java Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/TuttiEntities.java trunk/tutti-service/pom.xml trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfig.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfigOption.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ExportProtocolAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ImportProtocolAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.css trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.jaxx trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIModel.java trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties trunk/tutti-ui-swing/src/main/resources/icons/action-alert-error.png trunk/tutti-ui-swing/src/main/resources/icons/action-alert-info.png trunk/tutti-ui-swing/src/main/resources/icons/action-alert-none.png trunk/tutti-ui-swing/src/main/resources/icons/action-alert-warning.png trunk/tutti-ui-swing/src/main/resources/icons/action-protocol.png Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/TuttiEntities.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/TuttiEntities.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/TuttiEntities.java 2013-01-31 15:26:25 UTC (rev 277) @@ -187,6 +187,11 @@ return connection; } + public static <B extends IdAware> List<String> collecIds(List<B> list) { + List<String> result = Lists.transform(list, GET_ID); + return result; + } + protected static class IdPredicate<B extends IdAware> implements Predicate<B> { private final String id; Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java 2013-01-31 15:26:25 UTC (rev 277) @@ -1,345 +1,370 @@ -package fr.ifremer.tutti.persistence.service.measure; - -import java.io.Serializable; -import java.util.Iterator; - -import javax.annotation.Resource; - -import org.springframework.beans.factory.annotation.Autowired; -import org.springframework.stereotype.Component; - -import com.google.common.base.Preconditions; -import com.google.common.collect.Lists; -import com.google.common.collect.Sets; - -import fr.ifremer.adagio.core.dao.administration.user.DepartmentImpl; -import fr.ifremer.adagio.core.dao.data.batch.Batch; -import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; -import fr.ifremer.adagio.core.dao.data.measure.GearPhysicalMeasurement; -import fr.ifremer.adagio.core.dao.data.measure.Measurement; -import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; -import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; -import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; -import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; -import fr.ifremer.adagio.core.dao.data.vessel.feature.physical.GearPhysicalFeatures; -import fr.ifremer.adagio.core.dao.referential.QualityFlagDao; -import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; -import fr.ifremer.adagio.core.dao.referential.gear.GearImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; -import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; -import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryEnum; -import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; -import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; -import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; -import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; - -@Component("measurementPersistenceHelper") -public class MeasurementPersistenceHelper extends AbstractPersistenceService { - - @Autowired(required=true) - protected TuttiEnumerationFile enumeration; - - @Resource(name = "referentialPersistenceService") - protected ReferentialPersistenceService referentialService; - - @Resource(name = "qualityFlagDao") - protected QualityFlagDao qualityFlagDao; - - public MeasurementPersistenceHelper() { - } - - public QuantificationMeasurement setQuantificationMeasurement( - Batch batch, Integer pmfmId, Integer recorderDepartmentId, - Float weightValue, boolean isReferenceSorting) { - QuantificationMeasurement quantificationMeasurement = getQuantificationMeasurement( - batch, pmfmId, recorderDepartmentId, true); - - quantificationMeasurement.setNumericalValue(weightValue); - quantificationMeasurement - .setIsReferenceQuantification(isReferenceSorting); - return quantificationMeasurement; - } - - public QuantificationMeasurement getQuantificationMeasurement( - Batch batch, Integer pmfmId, Integer recorderDepartmentId, - boolean createIfNotExists) { - QuantificationMeasurement quantificationMeasurement = null; - if (batch.getQuantificationMeasurements() != null) { - for (Iterator iterator = batch - .getQuantificationMeasurements().iterator(); iterator - .hasNext();) { - QuantificationMeasurement qm = (QuantificationMeasurement) iterator - .next(); - if (pmfmId.equals(qm.getPmfm().getId())) { - quantificationMeasurement = qm; - break; - } - } - } - if (quantificationMeasurement == null) { - if (!createIfNotExists) { - return null; - } - quantificationMeasurement = QuantificationMeasurement.Factory - .newInstance(); - quantificationMeasurement.setBatch(batch); - if (batch.getQuantificationMeasurements() == null) { - batch.setQuantificationMeasurements(Sets - .newHashSet(quantificationMeasurement)); - } else { - batch.getQuantificationMeasurements().add( - quantificationMeasurement); - } - quantificationMeasurement.setQualityFlag(load( - QualityFlagImpl.class, - enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - quantificationMeasurement.setDepartment(load(DepartmentImpl.class, - recorderDepartmentId)); - quantificationMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); - } - - return quantificationMeasurement; - } - - public void setMeasurement(Measurement measurement, Caracteristic caracteristic, Serializable value) { - if (caracteristic.getCaracteristicType() == CaracteristicType.TEXT) { - measurement.setAlphanumericalValue((String)value); - } - else if (caracteristic.getCaracteristicType() == CaracteristicType.NUMBER) { - measurement.setNumericalValue((Float)value); - } - else if (caracteristic.getCaracteristicType() == CaracteristicType.QUALITATIVE) { - Integer qvId = null; - if (value instanceof Integer) { - qvId = (Integer)value; - } - else { - qvId = Integer.valueOf(value.toString()); - } - QualitativeValue qv = load(QualitativeValueImpl.class, qvId); - measurement.setQualitativeValue(qv); - } - } - - public SortingMeasurement setSortingMeasurement( - SortingBatch sortingBatch, Integer recorderDepartmentId, - SampleCategoryEnum sampleCategory, Serializable value) { - Preconditions.checkNotNull(sampleCategory); - Preconditions.checkNotNull(value); - - Integer pmfmId = sampleCategory2PmfmId(sampleCategory); - - Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); - SortingMeasurement sortingMeasurement = getSortingMeasurement( - sortingBatch, pmfmId, recorderDepartmentId, true); - setMeasurement(sortingMeasurement, caracteristic, value); - return sortingMeasurement; - } - - public SortingMeasurement setSortingMeasurement( - SortingBatch sortingBatch, Integer recorderDepartmentId, - Integer pmfmId, Serializable value) { - Preconditions.checkNotNull(pmfmId); - Preconditions.checkNotNull(value); - - Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); - SortingMeasurement sortingMeasurement = getSortingMeasurement( - sortingBatch, pmfmId, recorderDepartmentId, true); - setMeasurement(sortingMeasurement, caracteristic, value); - return sortingMeasurement; - } - - public SortingMeasurement getSortingMeasurement( - SortingBatch sortingBatch, Integer pmfmId, Integer recorderDepartmentId, - boolean createIfNotExists) { - SortingMeasurement sortingMeasurement = null; - if (sortingBatch.getSortingMeasurements() != null) { - for (Iterator iterator = sortingBatch - .getSortingMeasurements().iterator(); iterator - .hasNext();) { - SortingMeasurement qm = (SortingMeasurement) iterator - .next(); - if (pmfmId.equals(qm.getPmfm().getId())) { - sortingMeasurement = qm; - break; - } - } - } - if (sortingMeasurement == null) { - if (!createIfNotExists) { - return null; - } - sortingMeasurement = SortingMeasurement.Factory - .newInstance(); - sortingMeasurement.setSortingBatch(sortingBatch); - if (sortingBatch.getSortingMeasurements() == null) { - sortingBatch.setSortingMeasurements(Sets - .newHashSet(sortingMeasurement)); - sortingMeasurement.setRankOrder(1); - } else { - sortingBatch.getSortingMeasurements().add( - sortingMeasurement); - sortingMeasurement.setRankOrder(sortingBatch.getSortingMeasurements().size()); - } - sortingMeasurement.setQualityFlag(load( - QualityFlagImpl.class, - enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - sortingMeasurement.setDepartment(load(DepartmentImpl.class, - recorderDepartmentId)); - sortingMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); - } - - return sortingMeasurement; - } - - public Integer sampleCategory2PmfmId(SampleCategoryEnum sampleCategory) { - Integer pmfmId = null; - if (sampleCategory == SampleCategoryEnum.sortedUnsorted) { - pmfmId = enumeration.PMFM_ID_SORTED_UNSORTED; - } - else if (sampleCategory == SampleCategoryEnum.size) { - pmfmId = enumeration.PMFM_ID_SIZE_CATEGORY; - } - else if (sampleCategory == SampleCategoryEnum.maturity) { - pmfmId = enumeration.PMFM_ID_MATURITY; - } - else if (sampleCategory == SampleCategoryEnum.sex) { - pmfmId = enumeration.PMFM_ID_SEX; - } - else if (sampleCategory == SampleCategoryEnum.age) { - pmfmId = enumeration.PMFM_ID_AGE; - } - if (pmfmId == null) { - throw new IllegalArgumentException("Unable to find corresponding PMFM.ID for sampleCategory : " + sampleCategory.name()); - } - return pmfmId; - } - - public SampleCategoryEnum pmfmId2SampleCategory(Integer pmfmId) { - SampleCategoryEnum sampleCategory = null; - if (pmfmId.intValue() == enumeration.PMFM_ID_SORTED_UNSORTED.intValue()) { - sampleCategory = SampleCategoryEnum.sortedUnsorted; - } - else if (enumeration.PMFM_ID_SIZE_CATEGORY.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.size; - } - else if (enumeration.PMFM_ID_MATURITY.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.maturity; - } - else if (enumeration.PMFM_ID_SEX.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.sex; - } - else if (enumeration.PMFM_ID_AGE.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.age; - } - if (sampleCategory == null) { - throw new IllegalArgumentException("Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); - } - return sampleCategory; - } - - public GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId) { - return getGearPhysicalfeatures(fishingTrip, gearId, false); - } - - public GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId, boolean createIfNotExists) { - // Retrieve entities : Gear Physical Features - if (fishingTrip.getGearPhysicalFeatures() != null && fishingTrip.getGearPhysicalFeatures().size() >= 0) { - for (Iterator iterator = fishingTrip.getGearPhysicalFeatures().iterator(); iterator.hasNext();) { - GearPhysicalFeatures guf = (GearPhysicalFeatures) iterator.next(); - if (gearId.equals(guf.getGear().getId())) { - return guf; - } - } - } - if (!createIfNotExists) { - return null; - } - - GearPhysicalFeatures gearPhysicalFeature = GearPhysicalFeatures.Factory.newInstance(); - gearPhysicalFeature.setFishingTrip(fishingTrip); - - fr.ifremer.adagio.core.dao.referential.gear.Gear gear = (fr.ifremer.adagio.core.dao.referential.gear.Gear)getCurrentSession().load(GearImpl.class, gearId); - gearPhysicalFeature.setGear(gear); - if (fishingTrip.getGearPhysicalFeatures() == null) { - fishingTrip.setGearPhysicalFeatures(Lists.newArrayList(gearPhysicalFeature)); - } else { - fishingTrip.getGearPhysicalFeatures().add(gearPhysicalFeature); - } - - return gearPhysicalFeature; - } - - public GearPhysicalMeasurement getGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, Integer pmfmId) { - return getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); - } - - protected GearPhysicalMeasurement getGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, - Integer pmfmId, boolean createIfNotExists) { - GearPhysicalMeasurement gearPhysicalMeasurement = null; - if (gearPhysicalFeatures.getGearPhysicalMeasurements() != null) { - for (Iterator iterator = gearPhysicalFeatures.getGearPhysicalMeasurements().iterator(); iterator.hasNext();) { - GearPhysicalMeasurement vum = (GearPhysicalMeasurement) iterator.next(); - if (pmfmId.equals(vum.getPmfm().getId())) { - gearPhysicalMeasurement = vum; - break; - } - } - } - if (gearPhysicalMeasurement == null) { - if (!createIfNotExists) { - return null; - } - gearPhysicalMeasurement = GearPhysicalMeasurement.Factory.newInstance(); - gearPhysicalMeasurement.setGearPhysicalFeatures(gearPhysicalFeatures); - if (gearPhysicalFeatures.getGearPhysicalMeasurements() == null) { - gearPhysicalFeatures.setGearPhysicalMeasurements(Lists.newArrayList(gearPhysicalMeasurement)); - } - else { - gearPhysicalFeatures.getGearPhysicalMeasurements().add(gearPhysicalMeasurement); - } - gearPhysicalMeasurement.setQualityFlag(qualityFlagDao.load(enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - gearPhysicalMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); - Pmfm pmfm = (Pmfm)getCurrentSession().load(PmfmImpl.class, pmfmId); - gearPhysicalMeasurement.setPmfm(pmfm); - //gearPhysicalMeasurement.setPmfm(pmfmDao.load(pmfmId)); - } - - return gearPhysicalMeasurement; - } - - public void removeGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, - Integer pmfmId) { - GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); - if (gearPhysicalMeasurement == null) { - return; - } - gearPhysicalFeatures.getGearPhysicalMeasurements().remove(gearPhysicalMeasurement); - // TOBO BLa : vérifier qu'il ne faut pas dao.delete() en plus - } - - public GearPhysicalMeasurement setGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(scientificCruise, gearPhysicalFeatures, pmfmId, true); - - if (alphanumericalValue != null) { - gearPhysicalMeasurement.setAlphanumericalValue(alphanumericalValue); - } - else if (numericalValue != null) { - gearPhysicalMeasurement.setNumericalValue(numericalValue); - } - else if (qualitativevalueId != null) { - QualitativeValue qv = (QualitativeValue)getCurrentSession().load(QualitativeValueImpl.class, qualitativevalueId); - gearPhysicalMeasurement.setQualitativeValue(qv); - //gearPhysicalMeasurement.setQualitativeValue(qualitativeValueDao.load(qualitativevalueId)); - } - - return gearPhysicalMeasurement; - } -} +package fr.ifremer.tutti.persistence.service.measure; + +/* + * #%L + * Tutti :: Persistence Adagio (impl) + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + + +import java.io.Serializable; +import java.util.Iterator; + +import javax.annotation.Resource; + +import org.springframework.beans.factory.annotation.Autowired; +import org.springframework.stereotype.Component; + +import com.google.common.base.Preconditions; +import com.google.common.collect.Lists; +import com.google.common.collect.Sets; + +import fr.ifremer.adagio.core.dao.administration.user.DepartmentImpl; +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; +import fr.ifremer.adagio.core.dao.data.measure.GearPhysicalMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.Measurement; +import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; +import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; +import fr.ifremer.adagio.core.dao.data.vessel.feature.physical.GearPhysicalFeatures; +import fr.ifremer.adagio.core.dao.referential.QualityFlagDao; +import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.gear.GearImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; +import fr.ifremer.tutti.persistence.entities.data.SampleCategoryEnum; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; +import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; + +@Component("measurementPersistenceHelper") +public class MeasurementPersistenceHelper extends AbstractPersistenceService { + + @Autowired(required=true) + protected TuttiEnumerationFile enumeration; + + @Resource(name = "referentialPersistenceService") + protected ReferentialPersistenceService referentialService; + + @Resource(name = "qualityFlagDao") + protected QualityFlagDao qualityFlagDao; + + public MeasurementPersistenceHelper() { + } + + public QuantificationMeasurement setQuantificationMeasurement( + Batch batch, Integer pmfmId, Integer recorderDepartmentId, + Float weightValue, boolean isReferenceSorting) { + QuantificationMeasurement quantificationMeasurement = getQuantificationMeasurement( + batch, pmfmId, recorderDepartmentId, true); + + quantificationMeasurement.setNumericalValue(weightValue); + quantificationMeasurement + .setIsReferenceQuantification(isReferenceSorting); + return quantificationMeasurement; + } + + public QuantificationMeasurement getQuantificationMeasurement( + Batch batch, Integer pmfmId, Integer recorderDepartmentId, + boolean createIfNotExists) { + QuantificationMeasurement quantificationMeasurement = null; + if (batch.getQuantificationMeasurements() != null) { + for (Iterator iterator = batch + .getQuantificationMeasurements().iterator(); iterator + .hasNext();) { + QuantificationMeasurement qm = (QuantificationMeasurement) iterator + .next(); + if (pmfmId.equals(qm.getPmfm().getId())) { + quantificationMeasurement = qm; + break; + } + } + } + if (quantificationMeasurement == null) { + if (!createIfNotExists) { + return null; + } + quantificationMeasurement = QuantificationMeasurement.Factory + .newInstance(); + quantificationMeasurement.setBatch(batch); + if (batch.getQuantificationMeasurements() == null) { + batch.setQuantificationMeasurements(Sets + .newHashSet(quantificationMeasurement)); + } else { + batch.getQuantificationMeasurements().add( + quantificationMeasurement); + } + quantificationMeasurement.setQualityFlag(load( + QualityFlagImpl.class, + enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + quantificationMeasurement.setDepartment(load(DepartmentImpl.class, + recorderDepartmentId)); + quantificationMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); + } + + return quantificationMeasurement; + } + + public void setMeasurement(Measurement measurement, Caracteristic caracteristic, Serializable value) { + if (caracteristic.getCaracteristicType() == CaracteristicType.TEXT) { + measurement.setAlphanumericalValue((String)value); + } + else if (caracteristic.getCaracteristicType() == CaracteristicType.NUMBER) { + measurement.setNumericalValue((Float)value); + } + else if (caracteristic.getCaracteristicType() == CaracteristicType.QUALITATIVE) { + Integer qvId = null; + if (value instanceof Integer) { + qvId = (Integer)value; + } + else { + qvId = Integer.valueOf(value.toString()); + } + QualitativeValue qv = load(QualitativeValueImpl.class, qvId); + measurement.setQualitativeValue(qv); + } + } + + public SortingMeasurement setSortingMeasurement( + SortingBatch sortingBatch, Integer recorderDepartmentId, + SampleCategoryEnum sampleCategory, Serializable value) { + Preconditions.checkNotNull(sampleCategory); + Preconditions.checkNotNull(value); + + Integer pmfmId = sampleCategory2PmfmId(sampleCategory); + + Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); + SortingMeasurement sortingMeasurement = getSortingMeasurement( + sortingBatch, pmfmId, recorderDepartmentId, true); + setMeasurement(sortingMeasurement, caracteristic, value); + return sortingMeasurement; + } + + public SortingMeasurement setSortingMeasurement( + SortingBatch sortingBatch, Integer recorderDepartmentId, + Integer pmfmId, Serializable value) { + Preconditions.checkNotNull(pmfmId); + Preconditions.checkNotNull(value); + + Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); + SortingMeasurement sortingMeasurement = getSortingMeasurement( + sortingBatch, pmfmId, recorderDepartmentId, true); + setMeasurement(sortingMeasurement, caracteristic, value); + return sortingMeasurement; + } + + public SortingMeasurement getSortingMeasurement( + SortingBatch sortingBatch, Integer pmfmId, Integer recorderDepartmentId, + boolean createIfNotExists) { + SortingMeasurement sortingMeasurement = null; + if (sortingBatch.getSortingMeasurements() != null) { + for (Iterator iterator = sortingBatch + .getSortingMeasurements().iterator(); iterator + .hasNext();) { + SortingMeasurement qm = (SortingMeasurement) iterator + .next(); + if (pmfmId.equals(qm.getPmfm().getId())) { + sortingMeasurement = qm; + break; + } + } + } + if (sortingMeasurement == null) { + if (!createIfNotExists) { + return null; + } + sortingMeasurement = SortingMeasurement.Factory + .newInstance(); + sortingMeasurement.setSortingBatch(sortingBatch); + if (sortingBatch.getSortingMeasurements() == null) { + sortingBatch.setSortingMeasurements(Sets + .newHashSet(sortingMeasurement)); + sortingMeasurement.setRankOrder(1); + } else { + sortingBatch.getSortingMeasurements().add( + sortingMeasurement); + sortingMeasurement.setRankOrder(sortingBatch.getSortingMeasurements().size()); + } + sortingMeasurement.setQualityFlag(load( + QualityFlagImpl.class, + enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + sortingMeasurement.setDepartment(load(DepartmentImpl.class, + recorderDepartmentId)); + sortingMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); + } + + return sortingMeasurement; + } + + public Integer sampleCategory2PmfmId(SampleCategoryEnum sampleCategory) { + Integer pmfmId = null; + if (sampleCategory == SampleCategoryEnum.sortedUnsorted) { + pmfmId = enumeration.PMFM_ID_SORTED_UNSORTED; + } + else if (sampleCategory == SampleCategoryEnum.size) { + pmfmId = enumeration.PMFM_ID_SIZE_CATEGORY; + } + else if (sampleCategory == SampleCategoryEnum.maturity) { + pmfmId = enumeration.PMFM_ID_MATURITY; + } + else if (sampleCategory == SampleCategoryEnum.sex) { + pmfmId = enumeration.PMFM_ID_SEX; + } + else if (sampleCategory == SampleCategoryEnum.age) { + pmfmId = enumeration.PMFM_ID_AGE; + } + if (pmfmId == null) { + throw new IllegalArgumentException("Unable to find corresponding PMFM.ID for sampleCategory : " + sampleCategory.name()); + } + return pmfmId; + } + + public SampleCategoryEnum pmfmId2SampleCategory(Integer pmfmId) { + SampleCategoryEnum sampleCategory = null; + if (pmfmId.intValue() == enumeration.PMFM_ID_SORTED_UNSORTED.intValue()) { + sampleCategory = SampleCategoryEnum.sortedUnsorted; + } + else if (enumeration.PMFM_ID_SIZE_CATEGORY.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.size; + } + else if (enumeration.PMFM_ID_MATURITY.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.maturity; + } + else if (enumeration.PMFM_ID_SEX.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.sex; + } + else if (enumeration.PMFM_ID_AGE.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.age; + } + if (sampleCategory == null) { + throw new IllegalArgumentException("Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); + } + return sampleCategory; + } + + public GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId) { + return getGearPhysicalfeatures(fishingTrip, gearId, false); + } + + public GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId, boolean createIfNotExists) { + // Retrieve entities : Gear Physical Features + if (fishingTrip.getGearPhysicalFeatures() != null && fishingTrip.getGearPhysicalFeatures().size() >= 0) { + for (Iterator iterator = fishingTrip.getGearPhysicalFeatures().iterator(); iterator.hasNext();) { + GearPhysicalFeatures guf = (GearPhysicalFeatures) iterator.next(); + if (gearId.equals(guf.getGear().getId())) { + return guf; + } + } + } + if (!createIfNotExists) { + return null; + } + + GearPhysicalFeatures gearPhysicalFeature = GearPhysicalFeatures.Factory.newInstance(); + gearPhysicalFeature.setFishingTrip(fishingTrip); + + fr.ifremer.adagio.core.dao.referential.gear.Gear gear = (fr.ifremer.adagio.core.dao.referential.gear.Gear)getCurrentSession().load(GearImpl.class, gearId); + gearPhysicalFeature.setGear(gear); + if (fishingTrip.getGearPhysicalFeatures() == null) { + fishingTrip.setGearPhysicalFeatures(Lists.newArrayList(gearPhysicalFeature)); + } else { + fishingTrip.getGearPhysicalFeatures().add(gearPhysicalFeature); + } + + return gearPhysicalFeature; + } + + public GearPhysicalMeasurement getGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, Integer pmfmId) { + return getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); + } + + protected GearPhysicalMeasurement getGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, + Integer pmfmId, boolean createIfNotExists) { + GearPhysicalMeasurement gearPhysicalMeasurement = null; + if (gearPhysicalFeatures.getGearPhysicalMeasurements() != null) { + for (Iterator iterator = gearPhysicalFeatures.getGearPhysicalMeasurements().iterator(); iterator.hasNext();) { + GearPhysicalMeasurement vum = (GearPhysicalMeasurement) iterator.next(); + if (pmfmId.equals(vum.getPmfm().getId())) { + gearPhysicalMeasurement = vum; + break; + } + } + } + if (gearPhysicalMeasurement == null) { + if (!createIfNotExists) { + return null; + } + gearPhysicalMeasurement = GearPhysicalMeasurement.Factory.newInstance(); + gearPhysicalMeasurement.setGearPhysicalFeatures(gearPhysicalFeatures); + if (gearPhysicalFeatures.getGearPhysicalMeasurements() == null) { + gearPhysicalFeatures.setGearPhysicalMeasurements(Lists.newArrayList(gearPhysicalMeasurement)); + } + else { + gearPhysicalFeatures.getGearPhysicalMeasurements().add(gearPhysicalMeasurement); + } + gearPhysicalMeasurement.setQualityFlag(qualityFlagDao.load(enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + gearPhysicalMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); + Pmfm pmfm = (Pmfm)getCurrentSession().load(PmfmImpl.class, pmfmId); + gearPhysicalMeasurement.setPmfm(pmfm); + //gearPhysicalMeasurement.setPmfm(pmfmDao.load(pmfmId)); + } + + return gearPhysicalMeasurement; + } + + public void removeGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, + Integer pmfmId) { + GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); + if (gearPhysicalMeasurement == null) { + return; + } + gearPhysicalFeatures.getGearPhysicalMeasurements().remove(gearPhysicalMeasurement); + // TOBO BLa : vérifier qu'il ne faut pas dao.delete() en plus + } + + public GearPhysicalMeasurement setGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(scientificCruise, gearPhysicalFeatures, pmfmId, true); + + if (alphanumericalValue != null) { + gearPhysicalMeasurement.setAlphanumericalValue(alphanumericalValue); + } + else if (numericalValue != null) { + gearPhysicalMeasurement.setNumericalValue(numericalValue); + } + else if (qualitativevalueId != null) { + QualitativeValue qv = (QualitativeValue)getCurrentSession().load(QualitativeValueImpl.class, qualitativevalueId); + gearPhysicalMeasurement.setQualitativeValue(qv); + //gearPhysicalMeasurement.setQualitativeValue(qualitativeValueDao.load(qualitativevalueId)); + } + + return gearPhysicalMeasurement; + } +} \ No newline at end of file Property changes on: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Modified: trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml 2013-01-31 15:26:25 UTC (rev 277) @@ -1,62 +1,86 @@ -<?xml version="1.0" encoding="UTF-8"?> -<ehcache xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" - xsi:schemaLocation="http://ehcache.org/ehcache.xsd" - updateCheck="false"> - -  - <diskStore path="java.io.tmpdir/ehcache"/> - -  - <defaultCache - maxElementsInMemory="10000" - eternal="false" - timeToIdleSeconds="120" - timeToLiveSeconds="120" - overflowToDisk="true" /> - -  - <cache name="allFishingVessel" eternal="true" - maxElementsInMemory="1" - memoryStoreEvictionPolicy="LFU"/> - - <cache name="org.hibernate.cache.UpdateTimestampsCache" - maxElementsInMemory="5000" timeToIdleSeconds="300" - timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" - diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> - - <cache name="org.hibernate.cache.StandardQueryCache" - maxElementsInMemory="10000" eternal="false" timeToIdleSeconds="300" - timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" - diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> - +<?xml version="1.0" encoding="UTF-8"?> + + +<ehcache xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" + xsi:schemaLocation="http://ehcache.org/ehcache.xsd" + updateCheck="false"> + +  + <diskStore path="java.io.tmpdir/ehcache"/> + +  + <defaultCache + maxElementsInMemory="10000" + eternal="false" + timeToIdleSeconds="120" + timeToLiveSeconds="120" + overflowToDisk="true" /> + +  + <cache name="allFishingVessel" eternal="true" + maxElementsInMemory="1" + memoryStoreEvictionPolicy="LFU"/> + + <cache name="org.hibernate.cache.UpdateTimestampsCache" + maxElementsInMemory="5000" timeToIdleSeconds="300" + timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" + diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> + + <cache name="org.hibernate.cache.StandardQueryCache" + maxElementsInMemory="10000" eternal="false" timeToIdleSeconds="300" + timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" + diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> + </ehcache> \ No newline at end of file Property changes on: trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Modified: trunk/tutti-service/pom.xml =================================================================== --- trunk/tutti-service/pom.xml 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-service/pom.xml 2013-01-31 15:26:25 UTC (rev 277) @@ -72,6 +72,11 @@ </dependency> <dependency> + <groupId>org.nuiton</groupId> + <artifactId>nuiton-csv</artifactId> + </dependency> + + <dependency> <groupId>com.google.guava</groupId> <artifactId>guava</artifactId> </dependency> Deleted: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/TuttiProtocolImportExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/TuttiProtocolImportExportService.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/TuttiProtocolImportExportService.java 2013-01-31 15:26:25 UTC (rev 277) @@ -1,107 +0,0 @@ -package fr.ifremer.tutti.service; - -/* - * #%L - * Tutti :: Service - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import com.esotericsoftware.yamlbeans.YamlConfig; -import com.esotericsoftware.yamlbeans.YamlException; -import com.esotericsoftware.yamlbeans.YamlReader; -import com.esotericsoftware.yamlbeans.YamlWriter; -import com.google.common.base.Charsets; -import com.google.common.io.Closeables; -import com.google.common.io.Files; -import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocol; -import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; - -import java.io.BufferedWriter; -import java.io.File; -import java.io.IOException; -import java.io.Reader; - -/** - * To import / export {@link TuttiProtocol} to {@code Yaml} file formats. - * - * @author tchemit <chemit(a)codelutin.com> - * @since 1.0 - */ -public class TuttiProtocolImportExportService extends AbstractTuttiService { - - /** Logger. */ - private static final Log log = - LogFactory.getLog(TuttiProtocolImportExportService.class); - - public void exportProtocol(TuttiProtocol protocol, File file) throws IOException { - - YamlConfig config = createConfig(); - - String id = protocol.getId(); - - if (log.isInfoEnabled()) { - log.info("Will export protocol: " + id + " to file: " + file); - } - - BufferedWriter fileWriter = Files.newWriter(file, Charsets.UTF_8); - try { - YamlWriter writer = new YamlWriter(fileWriter, config); - writer.write(protocol); - writer.close(); - fileWriter.close(); - } catch (YamlException e) { - throw new IOException("Could not export protocol " + id, e); - } finally { - Closeables.closeQuietly(fileWriter); - } - } - - protected YamlConfig createConfig() { - YamlConfig config = new YamlConfig(); - config.setClassTag(SpeciesProtocol.class.getSimpleName(), - SpeciesProtocol.class); - config.writeConfig.setAlwaysWriteClassname(false); - config.writeConfig.setWriteRootTags(false); - return config; - } - - public TuttiProtocol importProtocol(File file) throws IOException { - if (log.isInfoEnabled()) { - log.info("Will import protocol from file: " + file); - } - - YamlConfig config = createConfig(); - - Reader fileReader = Files.newReader(file, Charsets.UTF_8); - try { - YamlReader reader = new YamlReader(fileReader, config); - TuttiProtocol result = reader.read(TuttiProtocol.class); - fileReader.close(); - return result; - } catch (YamlException e) { - throw new IOException("Could not import protocol from file " + file, e); - } finally { - Closeables.closeQuietly(fileReader); - } - } -} Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfig.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfig.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfig.java 2013-01-31 15:26:25 UTC (rev 277) @@ -107,6 +107,10 @@ return result; } + public char getCsvSeparator() { + return applicationConfig.getOption(TuttiServiceConfigOption.CSV_SEPARATOR.getKey()).charAt(0); + } + public void prepareDirectories() throws IOException { getOrCreateDirectory(TuttiServiceConfigOption.DATA_DIRECTORY); Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfigOption.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfigOption.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/config/TuttiServiceConfigOption.java 2013-01-31 15:26:25 UTC (rev 277) @@ -49,7 +49,10 @@ n_("tutti.config.tmp.directory"), "${java.io.tmpdir}/tutti", File.class), - + CSV_SEPARATOR("tutti.csv.separator", + n_("tutti.csv.separator"), + ";", + char.class), // TRANSIENT CONFIG VERSION("tutti.version", n_("tutti.config.application.version"), Added: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicRow.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicRow.java (rev 0) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicRow.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,96 @@ +/* + * #%L + * EchoBase :: Services + * + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2011 - 2012 Ifremer, Codelutin + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ +package fr.ifremer.tutti.service.protocol; + +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; + +import java.io.Serializable; + +/** + * Bean used as a row for import of {@link Caracteristic}. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 0.3 + */ +public class CaracteristicRow implements Serializable { + + private static final long serialVersionUID = 1L; + + public static final String PROPERTY_ID = "id"; + + public static final String PROPERTY_TYPE = "type"; + + public static final String PROPERTY_PARAMETER = "parameter"; + + public static final String PROPERTY_MATRIX = "matrix"; + + public static final String PROPERTY_FRACTION = "fraction"; + + public static final String PROPERTY_METHOD = "method"; + + public static final String PROPERTY_CARACTERISTIC = "caracteristic"; + + protected CaracteristicType type; + + protected Caracteristic caracteristic; + + public Caracteristic getCaracteristic() { + return caracteristic; + } + + public void setCaracteristic(Caracteristic caracteristic) { + this.caracteristic = caracteristic; + } + + public CaracteristicType getType() { + return type; + } + + public void setType(CaracteristicType type) { + this.type = type; + } + + public String getId() { + return getCaracteristic().getId(); + } + + public String getParameter() { + return getCaracteristic().getParameterName(); + } + + public String getMatrix() { + return getCaracteristic().getMatrixName(); + } + + public String getMethod() { + return getCaracteristic().getMethodName(); + } + + public String getFraction() { + return getCaracteristic().getFractionName(); + } + + +} Property changes on: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicRow.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Added: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicType.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicType.java (rev 0) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicType.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,39 @@ +package fr.ifremer.tutti.service.protocol; + +/* + * #%L + * Tutti :: Service + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +/** + * To define which caracteristic can be imported. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public enum CaracteristicType { + + LENGTH_CLASS, + ENVIRONMENT, + HYDROLOGY, + GEAR +} Property changes on: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/CaracteristicType.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Added: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicExportModel.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicExportModel.java (rev 0) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicExportModel.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,52 @@ +/* + * #%L + * EchoBase :: Services + * + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2011 - 2012 Ifremer, Codelutin + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ +package fr.ifremer.tutti.service.protocol; + + +import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; +import org.nuiton.util.csv.Common; +import org.nuiton.util.csv.ext.AbstractExportModel; + +/** + * Model to export caracteristics (from a protocol or not). + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class ProtocolCaracteristicExportModel extends AbstractExportModel<CaracteristicRow> { + + public ProtocolCaracteristicExportModel(char separator) { + super(separator); + + newColumnForExport(CaracteristicRow.PROPERTY_ID); + newColumnForExport(CaracteristicRow.PROPERTY_TYPE, Common.newEnumByNameParserFormatter(CaracteristicType.class)); + newColumnForExport(CaracteristicRow.PROPERTY_PARAMETER); + newColumnForExport(CaracteristicRow.PROPERTY_MATRIX); + newColumnForExport(CaracteristicRow.PROPERTY_FRACTION); + newColumnForExport(CaracteristicRow.PROPERTY_METHOD); + } + + +} Property changes on: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicExportModel.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Added: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicImportModel.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicImportModel.java (rev 0) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicImportModel.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,132 @@ +/* + * #%L + * EchoBase :: Services + * + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2011 - 2012 Ifremer, Codelutin + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ +package fr.ifremer.tutti.service.protocol; + + +import fr.ifremer.tutti.persistence.entities.IdAware; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import org.apache.commons.lang3.StringUtils; +import org.nuiton.util.csv.Common; +import org.nuiton.util.csv.ValueParserFormatter; +import org.nuiton.util.csv.ext.AbstractImportModel; + +import java.text.ParseException; +import java.util.Map; + +/** + * Model to import protocol caracteristics. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class ProtocolCaracteristicImportModel extends AbstractImportModel<CaracteristicRow> { + + public ProtocolCaracteristicImportModel(char separator, Map<String, Caracteristic> caracteristicMap) { + super(separator); + + newForeignKeyColumn(CaracteristicRow.PROPERTY_ID, + CaracteristicRow.PROPERTY_CARACTERISTIC, + Caracteristic.class, + Caracteristic.PROPERTY_ID, + caracteristicMap); + + newMandatoryColumn(CaracteristicRow.PROPERTY_TYPE, + CaracteristicRow.PROPERTY_TYPE, + Common.newEnumByNameParserFormatter(CaracteristicType.class)); + + newIgnoredColumn(CaracteristicRow.PROPERTY_PARAMETER); + newIgnoredColumn(CaracteristicRow.PROPERTY_MATRIX); + newIgnoredColumn(CaracteristicRow.PROPERTY_FRACTION); + newIgnoredColumn(CaracteristicRow.PROPERTY_METHOD); + } + + @Override + public CaracteristicRow newEmptyInstance() { + return new CaracteristicRow(); + } + + public <E extends IdAware> void newForeignKeyColumn(String headerName, String propertyName, Class<E> entityType, String foreignKeyName, Map<String, E> universe) { + newMandatoryColumn(headerName, propertyName, newForeignKeyValue(entityType, foreignKeyName, universe)); + } + + public <E extends IdAware> void newForeignKeyColumn(String propertyName, Class<E> entityType, String foreignKeyName, Map<String, E> universe) { + newMandatoryColumn(propertyName, propertyName, newForeignKeyValue(entityType, foreignKeyName, universe)); + } + + public static <E extends IdAware> ForeignKeyValue<E> newForeignKeyValue(Class<E> type, String propertyName, Map<String, E> universe) { + return new ForeignKeyValue<E>(type, propertyName, universe); + } + + /** + * @param <E> + * @author tchemit <chemit(a)codelutin.com> + * @since 2.6.12 + */ + public static class ForeignKeyValue<E extends IdAware> implements ValueParserFormatter<E> { + + protected final String propertyName; + + protected final Class<E> entityType; + + protected final Map<String, E> universe; + + public ForeignKeyValue(Class<E> entityType, + String propertyName, + Map<String, E> universe) { + this.entityType = entityType; + this.propertyName = propertyName; + this.universe = universe; + } + + @Override + public E parse(String value) throws ParseException { + E result = null; + if (StringUtils.isNotBlank(value)) { + + // get entity from universe + result = universe.get(value); + + if (result == null) { + + // can not find entity this is a big problem for us... + throw new RuntimeException( + "Could not find entity of type " + + entityType.getSimpleName() + " with '" + + propertyName + "' = " + value); + } + } + return result; + } + + @Override + public String format(E e) { + String value = ""; + if (e != null) { + value = e.getId(); + } + return value; + } + } +} Property changes on: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolCaracteristicImportModel.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Copied: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java (from rev 271, trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/TuttiProtocolImportExportService.java) =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java (rev 0) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportService.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,323 @@ +package fr.ifremer.tutti.service.protocol; + +/* + * #%L + * Tutti :: Service + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.esotericsoftware.yamlbeans.YamlConfig; +import com.esotericsoftware.yamlbeans.YamlException; +import com.esotericsoftware.yamlbeans.YamlReader; +import com.esotericsoftware.yamlbeans.YamlWriter; +import com.google.common.base.Charsets; +import com.google.common.base.Function; +import com.google.common.base.Preconditions; +import com.google.common.collect.Lists; +import com.google.common.collect.Multimap; +import com.google.common.collect.TreeMultimap; +import com.google.common.io.Closeables; +import com.google.common.io.Files; +import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocol; +import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.service.AbstractTuttiService; +import org.apache.commons.collections.CollectionUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.nuiton.util.csv.Export; +import org.nuiton.util.csv.Import2; +import org.nuiton.util.csv.ImportRow; + +import java.io.BufferedWriter; +import java.io.File; +import java.io.IOException; +import java.io.Reader; +import java.util.Collection; +import java.util.List; +import java.util.Map; + +/** + * To import / export {@link TuttiProtocol} to {@code Yaml} file formats. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class TuttiProtocolImportExportService extends AbstractTuttiService { + + /** Logger. */ + private static final Log log = + LogFactory.getLog(TuttiProtocolImportExportService.class); + + public void exportProtocol(TuttiProtocol protocol, File file) throws IOException { + + YamlConfig config = createConfig(); + + String id = protocol.getId(); + + if (log.isInfoEnabled()) { + log.info("Will export protocol: " + id + " to file: " + file); + } + + BufferedWriter fileWriter = Files.newWriter(file, Charsets.UTF_8); + try { + YamlWriter writer = new YamlWriter(fileWriter, config); + writer.write(protocol); + writer.close(); + fileWriter.close(); + } catch (YamlException e) { + throw new IOException("Could not export protocol " + id, e); + } finally { + Closeables.closeQuietly(fileWriter); + } + } + + public TuttiProtocol importProtocol(File file) throws IOException { + if (log.isInfoEnabled()) { + log.info("Will import protocol from file: " + file); + } + + YamlConfig config = createConfig(); + + Reader fileReader = Files.newReader(file, Charsets.UTF_8); + try { + YamlReader reader = new YamlReader(fileReader, config); + TuttiProtocol result = reader.read(TuttiProtocol.class); + fileReader.close(); + return result; + } catch (YamlException e) { + throw new IOException("Could not import protocol from file " + file, e); + } finally { + Closeables.closeQuietly(fileReader); + } + } + + public void importProtocolCaracteristic(File file, + TuttiProtocol protocol, + Map<String, Caracteristic> caracteristicMap) throws IOException { + if (log.isInfoEnabled()) { + log.info("Will import protocol [" + protocol.getName() + "] caracteristic from file: " + file); + } + + Multimap<CaracteristicType, String> ids = TreeMultimap.create(); + + ProtocolCaracteristicImportModel csvModel = + new ProtocolCaracteristicImportModel(getCsvSeparator(), + caracteristicMap); + + Reader reader = Files.newReader(file, Charsets.UTF_8); + try { + + Import2<CaracteristicRow> importer = + Import2.newImport(csvModel, reader); + + try { + + for (ImportRow<CaracteristicRow> row : importer) { + + if (!row.isValid()) { + + //TODO deal with line error + if (log.isErrorEnabled()) { + log.error("there is some error on line " + row.getLineNumber() + ":\n" + row.getErrors()); + } + } else { + + // treat row + CaracteristicRow bean = row.getBean(); + + CaracteristicType caracteristicType = bean.getType(); + + Caracteristic caracteristic = bean.getCaracteristic(); + String id = caracteristic.getId(); + ids.put(caracteristicType, id); + } + } + importer.close(); + } finally { + Closeables.closeQuietly(importer); + } + reader.close(); + } catch (YamlException e) { + throw new IOException("Could not import protocol [" + protocol.getName() + "] caracteristic from file " + file, e); + } finally { + + Closeables.closeQuietly(reader); + } + + protocol.setLengthClassesPmfmId( + mergeIds(protocol.getLengthClassesPmfmId(), + ids.get(CaracteristicType.LENGTH_CLASS))); + + protocol.setEnvironmentPmfmId( + mergeIds(protocol.getEnvironmentPmfmId(), + ids.get(CaracteristicType.ENVIRONMENT))); + + protocol.setGearPmfmId( + mergeIds(protocol.getGearPmfmId(), + ids.get(CaracteristicType.GEAR))); + + protocol.setHydrologyPmfmId( + mergeIds(protocol.getHydrologyPmfmId(), + ids.get(CaracteristicType.HYDROLOGY))); + } + + public void exportAllCaracteristic(File file, + + Map<String, Caracteristic> caracteristicMap) throws Exception { + + if (log.isInfoEnabled()) { + log.info("Will export all caracteristics to file: " + file); + } + + PmfmIdToCaracteristicRowFunction function = + new PmfmIdToCaracteristicRowFunction(caracteristicMap); + + List<CaracteristicRow> rows = Lists.transform( + Lists.newArrayList(caracteristicMap.keySet()), function); + + + ProtocolCaracteristicExportModel csvModel = + new ProtocolCaracteristicExportModel(getCsvSeparator()); + + BufferedWriter writer = Files.newWriter(file, Charsets.UTF_8); + try { + Export export = Export.newExport(csvModel, rows); + export.write(writer); + writer.close(); + } finally { + Closeables.closeQuietly(writer); + } + } + + public void exportProtocolCaracteristic(File file, TuttiProtocol protocol, + Map<String, Caracteristic> caracteristicMap) throws Exception { + + if (log.isInfoEnabled()) { + log.info("Will export all caracteristics to file: " + file); + } + + PmfmIdToCaracteristicRowFunction function = + new PmfmIdToCaracteristicRowFunction(caracteristicMap); + + List<CaracteristicRow> rows = Lists.newArrayList(); + + function.setType(CaracteristicType.LENGTH_CLASS); + rows.addAll(Lists.transform(protocol.getLengthClassesPmfmId(), function)); + + function.setType(CaracteristicType.ENVIRONMENT); + rows.addAll(Lists.transform(protocol.getEnvironmentPmfmId(), function)); + + function.setType(CaracteristicType.GEAR); + rows.addAll(Lists.transform(protocol.getGearPmfmId(), function)); + + function.setType(CaracteristicType.HYDROLOGY); + rows.addAll(Lists.transform(protocol.getHydrologyPmfmId(), function)); + + ProtocolCaracteristicExportModel csvModel = + new ProtocolCaracteristicExportModel(getCsvSeparator()); + + BufferedWriter writer = Files.newWriter(file, Charsets.UTF_8); + try { + Export export = Export.newExport(csvModel, rows); + export.write(writer); + writer.close(); + } finally { + Closeables.closeQuietly(writer); + } + } + + public void importProtocolSpecies(File file, + TuttiProtocol protocol) throws IOException { + if (log.isInfoEnabled()) { + log.info("Will import protocol [" + protocol.getName() + "] species from file: " + file); + } + Reader fileReader = Files.newReader(file, Charsets.UTF_8); + try { + if (log.isInfoEnabled()) { + log.info("TODO"); + } + fileReader.close(); + } catch (YamlException e) { + throw new IOException("Could not import protocol [" + protocol.getName() + "] species from file " + file, e); + } finally { + Closeables.closeQuietly(fileReader); + } + } + + protected YamlConfig createConfig() { + YamlConfig config = new YamlConfig(); + config.setClassTag(SpeciesProtocol.class.getSimpleName(), + SpeciesProtocol.class); + config.writeConfig.setAlwaysWriteClassname(false); + config.writeConfig.setWriteRootTags(false); + return config; + } + + protected char getCsvSeparator() { + return context.getConfig().getCsvSeparator(); + } + + protected List<String> mergeIds(Collection<String> fromProtocol, + Collection<String> fromImport) { + List<String> result = Lists.newArrayList(); + + if (CollectionUtils.isNotEmpty(fromProtocol)) { + for (String s : fromProtocol) { + if (!result.contains(s)) { + result.add(s); + } + } + + } + for (String s : fromImport) { + if (!result.contains(s)) { + result.add(s); + } + } + return result; + } + + private static class PmfmIdToCaracteristicRowFunction implements Function<String, CaracteristicRow> { + + private CaracteristicType type; + + private final Map<String, Caracteristic> caracteristicMap; + + public PmfmIdToCaracteristicRowFunction(Map<String, Caracteristic> caracteristicMap) { + this.caracteristicMap = caracteristicMap; + } + + @Override + public CaracteristicRow apply(String input) { + Caracteristic caracteristic = caracteristicMap.get(input); + Preconditions.checkNotNull(caracteristic, "Could not find a caracteristic with id: " + input); + CaracteristicRow result = new CaracteristicRow(); + result.setCaracteristic(caracteristic); + result.setType(type); + return result; + } + + public void setType(CaracteristicType type) { + this.type = type; + } + } +} Deleted: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/TuttiProtocolImportExportServiceTest.java =================================================================== --- trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/TuttiProtocolImportExportServiceTest.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/TuttiProtocolImportExportServiceTest.java 2013-01-31 15:26:25 UTC (rev 277) @@ -1,222 +0,0 @@ -package fr.ifremer.tutti.service; - -/* - * #%L - * Tutti :: Service - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import com.google.common.base.Charsets; -import com.google.common.collect.Lists; -import com.google.common.io.Files; -import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocol; -import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; -import org.apache.commons.lang3.StringUtils; -import org.apache.commons.lang3.SystemUtils; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; -import org.junit.Assert; -import org.junit.Before; -import org.junit.Rule; -import org.junit.Test; -import org.junit.rules.TestName; - -import java.io.File; - -/** - * @author tchemit <chemit(a)codelutin.com> - * @since 1.0 - */ -public class TuttiProtocolImportExportServiceTest { - - /** Logger. */ - private static final Log log = - LogFactory.getLog(TuttiProtocolImportExportServiceTest.class); - - public static final long TIMESTAMP = System.nanoTime(); - - @Rule - public final TestName name = new TestName(); - - protected File datadirectory; - - protected TuttiProtocolImportExportService service; - - public static final String PROTOCOL_FILE_CONTENT = - "id: 1\n" + - "name: protocolName\n" + - "comment: Commentaire\n" + - "environmentPmfmId: \n" + - "- 114\n" + - "- 228\n" + - "- 821\n" + - "gearPmfmId: \n" + - "- 21\n" + - "- 22\n" + - "hydrologyPmfmId: []\n" + - "species: \n" + - "- !SpeciesProtocol\n" + - " calcifySampleEnabled: true\n" + - " lengthStepPmfmId: 1394\n" + - " maturityEnabled: true\n" + - " sexEnabled: true\n" + - " speciesId: 11242\n" + - " weightEnabled: true\n" + - "- !SpeciesProtocol\n" + - " ageEnabled: true\n" + - " calcifySampleEnabled: true\n" + - " countIfNoFrequencyEnabled: true\n" + - " lengthStepPmfmId: 323\n" + - " maturityEnabled: true\n" + - " sexEnabled: true\n" + - " sizeEnabled: true\n" + - " speciesId: 3835\n" + - " weightEnabled: true"; - - @Before - public void setUp() throws Exception { - datadirectory = getTestSpecificDirectory(getClass(), - name.getMethodName(), - null); - - service = new TuttiProtocolImportExportService(); - } - - @Test - public void testExportProtocol() throws Exception { - - File exportFile = new File(datadirectory, "exportProtocol.yaml"); - - Files.createParentDirs(exportFile); - - Assert.assertFalse(exportFile.exists()); - TuttiProtocol protocol = new TuttiProtocol(); - protocol.setId("1"); - protocol.setName("protocolName"); - protocol.setComment("Commentaire"); - protocol.setEnvironmentPmfmId(Lists.newArrayList("114", "228", "821")); - protocol.setGearPmfmId(Lists.newArrayList("21", "22")); - protocol.setHydrologyPmfmId(Lists.<String>newArrayList()); - - protocol.setSpecies(Lists.<SpeciesProtocol>newArrayList()); - SpeciesProtocol sp1 = new SpeciesProtocol(); - sp1.setSpeciesId("11242"); - sp1.setLengthStepPmfmId("1394"); - sp1.setCalcifySampleEnabled(true); - sp1.setMaturityEnabled(true); - sp1.setSexEnabled(true); - sp1.setWeightEnabled(true); - protocol.addSpecies(sp1); - - SpeciesProtocol sp2 = new SpeciesProtocol(); - sp2.setSpeciesId("3835"); - sp2.setLengthStepPmfmId("323"); - sp2.setAgeEnabled(true); - sp2.setCalcifySampleEnabled(true); - sp2.setCountIfNoFrequencyEnabled(true); - sp2.setMaturityEnabled(true); - sp2.setSexEnabled(true); - sp2.setSizeEnabled(true); - sp2.setWeightEnabled(true); - protocol.addSpecies(sp2); - - service.exportProtocol(protocol, exportFile); - Assert.assertTrue(exportFile.exists()); - - String exportFileToString = Files.toString(exportFile, Charsets.UTF_8).trim(); - Assert.assertEquals(PROTOCOL_FILE_CONTENT, exportFileToString); - } - - @Test - public void testImportProtocol() throws Exception { - - File importfile = new File(datadirectory, "importProtocol.yaml"); - - Files.createParentDirs(importfile); - - Files.write(PROTOCOL_FILE_CONTENT, importfile, Charsets.UTF_8); - - TuttiProtocol protocol = service.importProtocol(importfile); - - Assert.assertNotNull(protocol); - Assert.assertEquals("1", protocol.getId()); - Assert.assertEquals("protocolName", protocol.getName()); - Assert.assertEquals("Commentaire", protocol.getComment()); - Assert.assertEquals(Lists.newArrayList("114", "228", "821"), protocol.getEnvironmentPmfmId()); - Assert.assertEquals(Lists.newArrayList("21", "22"), protocol.getGearPmfmId()); - Assert.assertEquals(Lists.<String>newArrayList(), protocol.getHydrologyPmfmId()); - Assert.assertNotNull(protocol.getSpecies()); - Assert.assertEquals(2, protocol.getSpecies().size()); - SpeciesProtocol sp1 = protocol.getSpecies().get(0); - Assert.assertNotNull(sp1); - Assert.assertEquals("11242", sp1.getSpeciesId()); - Assert.assertEquals("1394", sp1.getLengthStepPmfmId()); - Assert.assertFalse(sp1.isAgeEnabled()); - Assert.assertTrue(sp1.isCalcifySampleEnabled()); - Assert.assertFalse(sp1.isCountIfNoFrequencyEnabled()); - Assert.assertTrue(sp1.isMaturityEnabled()); - Assert.assertTrue(sp1.isSexEnabled()); - Assert.assertFalse(sp1.isSizeEnabled()); - Assert.assertTrue(sp1.isWeightEnabled()); - - SpeciesProtocol sp2 = protocol.getSpecies().get(1); - Assert.assertNotNull(sp2); - Assert.assertEquals("3835", sp2.getSpeciesId()); - Assert.assertEquals("323", sp2.getLengthStepPmfmId()); - Assert.assertTrue(sp2.isAgeEnabled()); - Assert.assertTrue(sp2.isCalcifySampleEnabled()); - Assert.assertTrue(sp2.isCountIfNoFrequencyEnabled()); - Assert.assertTrue(sp2.isMaturityEnabled()); - Assert.assertTrue(sp2.isSexEnabled()); - Assert.assertTrue(sp2.isSizeEnabled()); - Assert.assertTrue(sp2.isWeightEnabled()); - - - } - - public static File getTestSpecificDirectory(Class<?> testClassName, - String methodName, - String classifier) { - // Trying to look for the temporary folder to store data for the test - String tempDirPath = System.getProperty("java.io.tmpdir"); - if (tempDirPath == null) { - // can this really occur ? - tempDirPath = ""; - if (log.isWarnEnabled()) { - log.warn("'\"java.io.tmpdir\" not defined"); - } - } - File tempDirFile = SystemUtils.getJavaIoTmpDir(); - - // create the directory to store database data - String dataBasePath = testClassName.getName() - + File.separator // a directory with the test class name - + methodName; // a sub-directory with the method name - - if (StringUtils.isNotBlank(classifier)) { - dataBasePath += classifier; - } - dataBasePath += '_' - + TIMESTAMP; // and a timestamp - File databaseFile = new File(tempDirFile, dataBasePath); - return databaseFile; - } -} Copied: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportServiceTest.java (from rev 276, trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/TuttiProtocolImportExportServiceTest.java) =================================================================== --- trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportServiceTest.java (rev 0) +++ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/protocol/TuttiProtocolImportExportServiceTest.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,335 @@ +package fr.ifremer.tutti.service.protocol; + +/* + * #%L + * Tutti :: Service + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.google.common.base.Charsets; +import com.google.common.collect.Lists; +import com.google.common.collect.Maps; +import com.google.common.io.Files; +import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocol; +import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import org.apache.commons.lang3.StringUtils; +import org.apache.commons.lang3.SystemUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.junit.Assert; +import org.junit.Before; +import org.junit.Rule; +import org.junit.Test; +import org.junit.rules.TestName; + +import java.io.File; +import java.util.Map; + +/** + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class TuttiProtocolImportExportServiceTest { + + /** Logger. */ + private static final Log log = + LogFactory.getLog(TuttiProtocolImportExportServiceTest.class); + + public static final long TIMESTAMP = System.nanoTime(); + + @Rule + public final TestName name = new TestName(); + + protected File datadirectory; + + protected TuttiProtocolImportExportService service; + + public static final String PROTOCOL_FILE_CONTENT = + "id: 1\n" + + "name: protocolName\n" + + "comment: Commentaire\n" + + "environmentPmfmId: \n" + + "- 114\n" + + "- 228\n" + + "- 821\n" + + "gearPmfmId: \n" + + "- 21\n" + + "- 22\n" + + "hydrologyPmfmId: []\n" + + "lengthClassesPmfmId: \n" + + "- 14\n" + + "- 18\n" + + "species: \n" + + "- !SpeciesProtocol\n" + + " calcifySampleEnabled: true\n" + + " lengthStepPmfmId: 1394\n" + + " maturityEnabled: true\n" + + " sexEnabled: true\n" + + " speciesId: 11242\n" + + " weightEnabled: true\n" + + "- !SpeciesProtocol\n" + + " ageEnabled: true\n" + + " calcifySampleEnabled: true\n" + + " countIfNoFrequencyEnabled: true\n" + + " lengthStepPmfmId: 323\n" + + " maturityEnabled: true\n" + + " sexEnabled: true\n" + + " sizeEnabled: true\n" + + " speciesId: 3835\n" + + " weightEnabled: true"; + + public static final String PROTOCOL_CARACTERISTIC_FILE_CONTENT = + "id;type;parameter;matrix;fraction;method\n" + + "1;LENGTH_CLASS;parameterName1;matrixName1;fractionName1;methodName1;\n" + + "2;ENVIRONMENT;parameterName2;matrixName2;fractionName2;methodName2;\n" + + "3;GEAR;parameterName3;matrixName3;fractionName3;methodName3;\n" + + "4;HYDROLOGY;parameterName4;matrixName4;fractionName4;methodName4;\n" + + "5;HYDROLOGY;parameterName5;matrixName5;fractionName5;methodName5;"; + + public static final String ALL_CARACTERISTIC_FILE_CONTENT = + "id;type;parameter;matrix;fraction;method\n" + + "1;;parameterName1;matrixName1;fractionName1;methodName1;\n" + + "2;;parameterName2;matrixName2;fractionName2;methodName2;\n" + + "3;;parameterName3;matrixName3;fractionName3;methodName3;\n" + + "4;;parameterName4;matrixName4;fractionName4;methodName4;\n" + + "5;;parameterName5;matrixName5;fractionName5;methodName5;"; + + + @Before + public void setUp() throws Exception { + datadirectory = getTestSpecificDirectory(getClass(), + name.getMethodName(), + null); + + service = new TuttiProtocolImportExportService() { + + @Override + protected char getCsvSeparator() { + return ';'; + } + }; + } + + @Test + public void exportProtocol() throws Exception { + + File exportFile = new File(datadirectory, "exportProtocol.yaml"); + + Files.createParentDirs(exportFile); + + Assert.assertFalse(exportFile.exists()); + TuttiProtocol protocol = new TuttiProtocol(); + protocol.setId("1"); + protocol.setName("protocolName"); + protocol.setComment("Commentaire"); + protocol.setLengthClassesPmfmId(Lists.newArrayList("14", "18")); + protocol.setEnvironmentPmfmId(Lists.newArrayList("114", "228", "821")); + protocol.setGearPmfmId(Lists.newArrayList("21", "22")); + protocol.setHydrologyPmfmId(Lists.<String>newArrayList()); + + protocol.setSpecies(Lists.<SpeciesProtocol>newArrayList()); + SpeciesProtocol sp1 = new SpeciesProtocol(); + sp1.setSpeciesId("11242"); + sp1.setLengthStepPmfmId("1394"); + sp1.setCalcifySampleEnabled(true); + sp1.setMaturityEnabled(true); + sp1.setSexEnabled(true); + sp1.setWeightEnabled(true); + protocol.addSpecies(sp1); + + SpeciesProtocol sp2 = new SpeciesProtocol(); + sp2.setSpeciesId("3835"); + sp2.setLengthStepPmfmId("323"); + sp2.setAgeEnabled(true); + sp2.setCalcifySampleEnabled(true); + sp2.setCountIfNoFrequencyEnabled(true); + sp2.setMaturityEnabled(true); + sp2.setSexEnabled(true); + sp2.setSizeEnabled(true); + sp2.setWeightEnabled(true); + protocol.addSpecies(sp2); + + service.exportProtocol(protocol, exportFile); + Assert.assertTrue(exportFile.exists()); + + String exportFileToString = Files.toString(exportFile, Charsets.UTF_8).trim(); + Assert.assertEquals(PROTOCOL_FILE_CONTENT, exportFileToString); + } + + @Test + public void importProtocol() throws Exception { + + File importfile = new File(datadirectory, "importProtocol.yaml"); + + Files.createParentDirs(importfile); + + Files.write(PROTOCOL_FILE_CONTENT, importfile, Charsets.UTF_8); + + TuttiProtocol protocol = service.importProtocol(importfile); + + Assert.assertNotNull(protocol); + Assert.assertEquals("1", protocol.getId()); + Assert.assertEquals("protocolName", protocol.getName()); + Assert.assertEquals("Commentaire", protocol.getComment()); + Assert.assertEquals(Lists.newArrayList("14", "18"), protocol.getLengthClassesPmfmId()); + Assert.assertEquals(Lists.newArrayList("114", "228", "821"), protocol.getEnvironmentPmfmId()); + Assert.assertEquals(Lists.newArrayList("21", "22"), protocol.getGearPmfmId()); + Assert.assertEquals(Lists.<String>newArrayList(), protocol.getHydrologyPmfmId()); + Assert.assertNotNull(protocol.getSpecies()); + Assert.assertEquals(2, protocol.getSpecies().size()); + SpeciesProtocol sp1 = protocol.getSpecies().get(0); + Assert.assertNotNull(sp1); + Assert.assertEquals("11242", sp1.getSpeciesId()); + Assert.assertEquals("1394", sp1.getLengthStepPmfmId()); + Assert.assertFalse(sp1.isAgeEnabled()); + Assert.assertTrue(sp1.isCalcifySampleEnabled()); + Assert.assertFalse(sp1.isCountIfNoFrequencyEnabled()); + Assert.assertTrue(sp1.isMaturityEnabled()); + Assert.assertTrue(sp1.isSexEnabled()); + Assert.assertFalse(sp1.isSizeEnabled()); + Assert.assertTrue(sp1.isWeightEnabled()); + + SpeciesProtocol sp2 = protocol.getSpecies().get(1); + Assert.assertNotNull(sp2); + Assert.assertEquals("3835", sp2.getSpeciesId()); + Assert.assertEquals("323", sp2.getLengthStepPmfmId()); + Assert.assertTrue(sp2.isAgeEnabled()); + Assert.assertTrue(sp2.isCalcifySampleEnabled()); + Assert.assertTrue(sp2.isCountIfNoFrequencyEnabled()); + Assert.assertTrue(sp2.isMaturityEnabled()); + Assert.assertTrue(sp2.isSexEnabled()); + Assert.assertTrue(sp2.isSizeEnabled()); + Assert.assertTrue(sp2.isWeightEnabled()); + } + + @Test + public void importProtocolCaracteristic() throws Exception { + + File importfile = new File(datadirectory, "importProtocolCaracteristic.csv"); + + Files.createParentDirs(importfile); + + Files.write(PROTOCOL_CARACTERISTIC_FILE_CONTENT, importfile, Charsets.UTF_8); + + TuttiProtocol protocol = new TuttiProtocol(); + Map<String, Caracteristic> caracteristicMap = createCaracteristics(); + + service.importProtocolCaracteristic(importfile, + protocol, + caracteristicMap); + + Assert.assertEquals(Lists.newArrayList("1"), + protocol.getLengthClassesPmfmId()); + Assert.assertEquals(Lists.newArrayList("2"), + protocol.getEnvironmentPmfmId()); + Assert.assertEquals(Lists.newArrayList("3"), + protocol.getGearPmfmId()); + Assert.assertEquals(Lists.newArrayList("4", "5"), + protocol.getHydrologyPmfmId()); + } + + @Test + public void exportProtocolCaracteristic() throws Exception { + + File file = new File(datadirectory, "exportProtocolCaracteristic.csv"); + + Files.createParentDirs(file); + + Map<String, Caracteristic> caracteristicMap = createCaracteristics(); + TuttiProtocol protocol = new TuttiProtocol(); + + protocol.setLengthClassesPmfmId(Lists.newArrayList("1")); + protocol.setEnvironmentPmfmId(Lists.newArrayList("2")); + protocol.setGearPmfmId(Lists.newArrayList("3")); + protocol.setHydrologyPmfmId(Lists.newArrayList("4", "5")); + + Assert.assertFalse(file.exists()); + service.exportProtocolCaracteristic(file, + protocol, + caracteristicMap); + + Assert.assertTrue(file.exists()); + + String exportFileToString = Files.toString(file, Charsets.UTF_8).trim(); + Assert.assertEquals(PROTOCOL_CARACTERISTIC_FILE_CONTENT, exportFileToString); + } + + @Test + public void exportAllCaracteristic() throws Exception { + + File file = new File(datadirectory, "exportAllCaracteristic.csv"); + + Files.createParentDirs(file); + + Map<String, Caracteristic> caracteristicMap = createCaracteristics(); + + Assert.assertFalse(file.exists()); + service.exportAllCaracteristic(file, caracteristicMap); + + Assert.assertTrue(file.exists()); + + String exportFileToString = Files.toString(file, Charsets.UTF_8).trim(); + Assert.assertEquals(ALL_CARACTERISTIC_FILE_CONTENT, exportFileToString); + } + + public static File getTestSpecificDirectory(Class<?> testClassName, + String methodName, + String classifier) { + // Trying to look for the temporary folder to store data for the test + String tempDirPath = System.getProperty("java.io.tmpdir"); + if (tempDirPath == null) { + // can this really occur ? + tempDirPath = ""; + if (log.isWarnEnabled()) { + log.warn("'\"java.io.tmpdir\" not defined"); + } + } + File tempDirFile = SystemUtils.getJavaIoTmpDir(); + + // create the directory to store database data + String dataBasePath = testClassName.getName() + + File.separator // a directory with the test class name + + methodName; // a sub-directory with the method name + + if (StringUtils.isNotBlank(classifier)) { + dataBasePath += classifier; + } + dataBasePath += '_' + + TIMESTAMP; // and a timestamp + File databaseFile = new File(tempDirFile, dataBasePath); + return databaseFile; + } + + protected Map<String, Caracteristic> createCaracteristics() { + Map<String, Caracteristic> caracteristicMap = Maps.newTreeMap(); + for (int i = 1; i < 6; i++) { + Caracteristic c = new Caracteristic(); + c.setId("" + i); + c.setParameterName("parameterName" + i); + c.setMatrixName("matrixName" + i); + c.setFractionName("fractionName" + i); + c.setMethodName("methodName" + i); + caracteristicMap.put(i + "", c); + } + return caracteristicMap; + } +} Added: trunk/tutti-service/src/test/resources/log4j.properties =================================================================== --- trunk/tutti-service/src/test/resources/log4j.properties (rev 0) +++ trunk/tutti-service/src/test/resources/log4j.properties 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,32 @@ +### +# #%L +# Tutti :: Service +# $Id$ +# $HeadURL$ +# %% +# Copyright (C) 2012 - 2013 Ifremer +# %% +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as +# published by the Free Software Foundation, either version 3 of the +# License, or (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public +# License along with this program. If not, see +# <http://www.gnu.org/licenses/gpl-3.0.html>. +# #L% +### + +log4j.rootCategory=WARN, A1 +log4j.logger.no.api=DEBUG +log4j.appender.A1=org.apache.log4j.ConsoleAppender +log4j.appender.A1.layout=org.apache.log4j.PatternLayout +log4j.appender.A1.layout.ConversionPattern=%d %-4r [%t] %-5p %c %x - %m%n + +log4j.logger.fr.ifremer.tutti=INFO +log4j.logger.org.nuiton=INFO \ No newline at end of file Property changes on: trunk/tutti-service/src/test/resources/log4j.properties ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ExportProtocolAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ExportProtocolAction.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ExportProtocolAction.java 2013-01-31 15:26:25 UTC (rev 277) @@ -26,7 +26,7 @@ import com.ezware.oxbow.swingbits.util.Preconditions; import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; -import fr.ifremer.tutti.service.TuttiProtocolImportExportService; +import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; import org.apache.commons.logging.Log; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ImportProtocolAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ImportProtocolAction.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/ImportProtocolAction.java 2013-01-31 15:26:25 UTC (rev 277) @@ -25,7 +25,7 @@ */ import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; -import fr.ifremer.tutti.service.TuttiProtocolImportExportService; +import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; import fr.ifremer.tutti.ui.swing.TuttiScreen; import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.css =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.css 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.css 2013-01-31 15:26:25 UTC (rev 277) @@ -99,20 +99,51 @@ sortable: false; } +#caracteristicPane { + tabPlacement: {JTabbedPane.LEFT}; +} + +#importSpecies{ + actionIcon: import; + action: {importProtocolSpeciesAction}; +} + +#importCaracteristic { + actionIcon: import; + action: {importProtocolCaracteristicAction}; +} + +#exportCaracteristic { + actionIcon: export; + action: {exportProtocolCaracteristicAction}; +} + +#exportAllCaracteristic { + actionIcon: export; + action: {exportAllCaracteristicAction}; +} + #gearList { property: gearPmfm; beanType: {Caracteristic.class}; - border: {BorderFactory.createTitledBorder(_("tutti.label.tab.fishingOperation.gearShooting"))}; + /*border: {BorderFactory.createTitledBorder(_("tutti.label.tab.fishingOperation.gearShooting"))};*/ } #environmentList { property: environmentPmfm; beanType: {Caracteristic.class}; - border: {BorderFactory.createTitledBorder(_("tutti.label.tab.fishingOperation.environment"))}; + /*border: {BorderFactory.createTitledBorder(_("tutti.label.tab.fishingOperation.environment"))};*/ } #hydrologyList { property: hydrologyPmfm; beanType: {Caracteristic.class}; - border: {BorderFactory.createTitledBorder(_("tutti.label.tab.fishingOperation.hydrology"))}; + /*border: {BorderFactory.createTitledBorder(_("tutti.label.tab.fishingOperation.hydrology"))};*/ } + +#lengthClassesList { + property: lengthClassesPmfm; + beanType: {Caracteristic.class}; + /*border: {BorderFactory.createTitledBorder(_("tutti.label.tab.fishingOperation.lengthClasses"))};*/ +} + Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.jaxx =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.jaxx 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUI.jaxx 2013-01-31 15:26:25 UTC (rev 277) @@ -68,9 +68,21 @@ <EditProtocolUIModel id='model' initializer='getContextValue(EditProtocolUIModel.class)'/> - <CancelEditProtocolAction id='cancelEditProtocolAction' constructorParams='handler'/> + <CancelEditProtocolAction id='cancelEditProtocolAction' + constructorParams='handler'/> <SaveProtocolAction id='saveProtocolAction' constructorParams='handler'/> + <ImportProtocolCaracteristicAction id='importProtocolCaracteristicAction' + constructorParams='handler'/> + <ExportProtocolCaracteristicAction id='exportProtocolCaracteristicAction' + constructorParams='handler'/> + + <ExportAllCaracteristicAction id='exportAllCaracteristicAction' + constructorParams='handler'/> + + <ImportProtocolSpeciesAction id='importProtocolSpeciesAction' + constructorParams='handler'/> + <SwingValidatorMessageTableModel id='errorTableModel'/> <BeanValidator id='validator' bean='model' errorTableModel='errorTableModel' @@ -113,7 +125,31 @@ </tab> <tab title='tutti.label.tab.protocol.fishingOperation'> - <Table fill='both' weightx='1'> + <JPanel id='caracteristicPanel' layout="{new BorderLayout()}"> + <JPanel id='caracteristicActions' layout="{new GridLayout()}" + constraints='BorderLayout.NORTH'> + + <JButton id='importCaracteristic'/> + <JButton id='exportCaracteristic'/> + <JButton id='exportAllCaracteristic'/> + </JPanel> + <JTabbedPane id='caracteristicPane' constraints='BorderLayout.CENTER'> + <tab title='tutti.label.tab.protocol.caracteristic.lengthClasses'> + <BeanDoubleList id='lengthClassesList' genericType='Caracteristic'/> + </tab> + <tab title='tutti.label.tab.protocol.caracteristic.gear'> + <BeanDoubleList id='gearList' genericType='Caracteristic'/> + </tab> + <tab title='tutti.label.tab.protocol.caracteristic.environment'> + <BeanDoubleList id='environmentList' genericType='Caracteristic'/> + </tab> + <tab title='tutti.label.tab.protocol.caracteristic.hydrology'> + <BeanDoubleList id='hydrologyList' genericType='Caracteristic'/> + </tab> + </JTabbedPane> + </JPanel> + +  </tab> <tab title='tutti.label.tab.protocol.species'> - <Table fill='both'> - <row fill='both'> - <cell fill='both' weightx='1'> - <BeanComboBox id='speciesComboBox' constructorParams='this' - genericType='Species'/> - </cell> - <cell fill='both'> - <JButton id='addRow' onActionPerformed='handler.addRow()'/> - </cell> - </row> - <row fill='both' weighty='1'> - <cell fill='both' columns='2'> - <JScrollPane> - <JXTable id='speciesTable' - onMouseClicked='handler.autoSelectRowInTable(event, tablePopup)'/> - </JScrollPane> - </cell> - </row> - </Table> + <JPanel id='speciesPanel' layout="{new BorderLayout()}"> + <JButton id='importSpecies' constraints='BorderLayout.NORTH'/> + <Table fill='both' constraints='BorderLayout.CENTER'> + + <row fill='both'> + <cell fill='both' weightx='1'> + <BeanComboBox id='speciesComboBox' constructorParams='this' + genericType='Species'/> + </cell> + <cell fill='both'> + <JButton id='addRow' onActionPerformed='handler.addRow()'/> + </cell> + </row> + <row fill='both' weighty='1'> + <cell fill='both' columns='2'> + <JScrollPane> + <JXTable id='speciesTable' + onMouseClicked='handler.autoSelectRowInTable(event, tablePopup)'/> + </JScrollPane> + </cell> + </row> + </Table> + </JPanel> </tab> - <tab title='tutti.label.tab.protocol.benthos'> + <tab title='tutti.label.tab.protocol.benthos' enabled='false'> <JLabel text='tutti.to.be.done' enabled='false' horizontalAlignment="{JLabel.CENTER}"/> </tab> - <tab title='tutti.label.tab.protocol.plankton'> + <tab title='tutti.label.tab.protocol.plankton' enabled='false'> <JLabel text='tutti.to.be.done' enabled='false' horizontalAlignment="{JLabel.CENTER}"/> </tab> - <tab title='tutti.label.tab.protocol.accidental'> + <tab title='tutti.label.tab.protocol.accidental' enabled='false'> <JLabel text='tutti.to.be.done' enabled='false' horizontalAlignment="{JLabel.CENTER}"/> </tab> - </JTabbedPane> - <JPanel id='warningContainer' layout='{new BorderLayout(10, 10)}' constraints='BorderLayout.NORTH'> + <JPanel id='warningContainer' layout='{new BorderLayout(10, 10)}' + constraints='BorderLayout.NORTH'> <JLabel id='importWarning' constraints='BorderLayout.CENTER'/> </JPanel> <JPanel layout='{new GridLayout(1, 0)}' constraints='BorderLayout.SOUTH'> Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java 2013-01-31 15:26:25 UTC (rev 277) @@ -70,6 +70,8 @@ protected Map<String, Caracteristic> allLengthStepPmfm; + protected List<Caracteristic> allCaracteristic; + // protected Multimap<String, String> hydroCaracteristics; public EditProtocolUIHandler(TuttiUI parentUi, EditProtocolUI ui) { @@ -166,6 +168,8 @@ allLengthStepPmfm = TuttiEntities.splitById( persistenceService.getAllCaracteristic()); + allCaracteristic = persistenceService.getAllCaracteristic(); + // hydroCaracteristics = ArrayListMultimap.create(); // for (Caracteristic caracteristic : // persistenceService.getAllCaracteristic()) { @@ -174,6 +178,10 @@ // } } + public List<Caracteristic> getAllCaracteristic() { + return allCaracteristic; + } + @Override public void afterInitUI() { @@ -291,27 +299,23 @@ // set to model ( will propagate to tableModel) model.setRows(rows); - // init species combo box initBeanComboBox(ui.getSpeciesComboBox(), speciesList, null); selectFirstInCombo(ui.getSpeciesComboBox()); - // init gear pmfm double list - List<Caracteristic> gearPmfm = - persistenceService.getAllCaracteristic(); - initDoubleList(ui.getGearList(), gearPmfm, model.getGearPmfmId()); + initDoubleList(ui.getLengthClassesList(), + Lists.newArrayList(allCaracteristic), + model.getHydrologyPmfmId()); - // init environement pmfm double list - List<Caracteristic> environmentPmfm = - persistenceService.getAllCaracteristic(); + initDoubleList(ui.getGearList(), + Lists.newArrayList(allCaracteristic), + model.getGearPmfmId()); + initDoubleList(ui.getEnvironmentList(), - environmentPmfm, + Lists.newArrayList(allCaracteristic), model.getEnvironmentPmfmId()); - // init hydro pmfm double list - List<Caracteristic> hydroPmfm = - persistenceService.getAllCaracteristic(); initDoubleList(ui.getHydrologyList(), - hydroPmfm, + Lists.newArrayList(allCaracteristic), model.getHydrologyPmfmId()); // List<Caracteristic> selection = Lists.newArrayList(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIModel.java 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIModel.java 2013-01-31 15:26:25 UTC (rev 277) @@ -24,7 +24,7 @@ * #L% */ -import com.google.common.collect.Lists; +import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.ui.swing.util.table.AbstractTuttiTableUIModel; @@ -121,6 +121,11 @@ firePropertyChange(PROPERTY_LENGTH_CLASSES_PMFM_ID, oldValue, lengthClassesPmfmId); } + public void setLengthClassesPmfm(List<Caracteristic> lengthClassesPmfm) { + List<String> ids = TuttiEntities.collecIds(lengthClassesPmfm); + setLengthClassesPmfmId(ids); + } + public List<String> getGearPmfmId() { return gearPmfmId; } @@ -132,10 +137,7 @@ } public void setGearPmfm(List<Caracteristic> gearPmfm) { - List<String> ids = Lists.newArrayList(); - for (Caracteristic caracteristic : gearPmfm) { - ids.add(caracteristic.getId()); - } + List<String> ids = TuttiEntities.collecIds(gearPmfm); setGearPmfmId(ids); } @@ -150,10 +152,7 @@ } public void setEnvironmentPmfm(List<Caracteristic> environmentPmfm) { - List<String> ids = Lists.newArrayList(); - for (Caracteristic caracteristic : environmentPmfm) { - ids.add(caracteristic.getId()); - } + List<String> ids = TuttiEntities.collecIds(environmentPmfm); setEnvironmentPmfmId(ids); } @@ -168,10 +167,7 @@ } public void setHydrologyPmfm(List<Caracteristic> hydrologyPmfm) { - List<String> ids = Lists.newArrayList(); - for (Caracteristic caracteristic : hydrologyPmfm) { - ids.add(caracteristic.getId()); - } + List<String> ids = TuttiEntities.collecIds(hydrologyPmfm); setHydrologyPmfmId(ids); } Added: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java (rev 0) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,86 @@ +package fr.ifremer.tutti.ui.swing.content.protocol; + +import fr.ifremer.tutti.persistence.entities.TuttiEntities; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; +import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; +import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; + +import java.awt.event.ActionEvent; +import java.io.File; +import java.util.List; +import java.util.Map; + +import static org.nuiton.i18n.I18n._; + +/** + * To export all caracteristics. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class ExportAllCaracteristicAction extends AbstractTuttiAction<EditProtocolUIModel, EditProtocolUIHandler> { + + private static final long serialVersionUID = 1L; + + /** Logger. */ + private static final Log log = + LogFactory.getLog(ExportAllCaracteristicAction.class); + + private File file; + + public ExportAllCaracteristicAction(EditProtocolUIHandler handler) { + super(handler, + "exportAllCaracteristic", + "export", + _("tutti.action.exportAllCaracteristic"), + _("tutti.action.exportAllCaracteristic.tip"), + true + ); + } + + @Override + protected boolean prepareAction(ActionEvent event) { + + // choose file to import + file = TuttiUIUtil.chooseFile( + getContext().getMainUI(), + _("tutti.title.choose.protocolCaracteristicExportFile"), + _("tutti.action.chooseProtocolCaracteristicFile"), + null, + "^.*\\.csv", _("tutti.file.csv") + ); + boolean doAction = file != null; + if (doAction) { + super.prepareAction(event); + } + return doAction; + } + + @Override + protected void releaseAction(ActionEvent event) { + super.releaseAction(event); + file = null; + } + + @Override + protected void doAction(ActionEvent e) throws Exception { + + if (log.isInfoEnabled()) { + log.info("Will export all caracteristic to file: " + file); + } + + // export protocol caracteristics + TuttiProtocolImportExportService service = + getContext().getService(TuttiProtocolImportExportService.class); + + List<Caracteristic> allCaracteristic = getHandler().getAllCaracteristic(); + Map<String, Caracteristic> caracteristicMap = TuttiEntities.splitById(allCaracteristic); + + service.exportAllCaracteristic(file, caracteristicMap); + + sendMessage("Caractéristiques exportées dans le fichier."); + } +} \ No newline at end of file Property changes on: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportAllCaracteristicAction.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Added: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java (rev 0) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,90 @@ +package fr.ifremer.tutti.ui.swing.content.protocol; + +import fr.ifremer.tutti.persistence.entities.TuttiEntities; +import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; +import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; +import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; + +import java.awt.event.ActionEvent; +import java.io.File; +import java.util.List; +import java.util.Map; + +import static org.nuiton.i18n.I18n._; + +/** + * To import protocol caracteristics. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class ExportProtocolCaracteristicAction extends AbstractTuttiAction<EditProtocolUIModel, EditProtocolUIHandler> { + + private static final long serialVersionUID = 1L; + + /** Logger. */ + private static final Log log = + LogFactory.getLog(ExportProtocolCaracteristicAction.class); + + private File file; + + public ExportProtocolCaracteristicAction(EditProtocolUIHandler handler) { + super(handler, + "exportProtocolCaracteristic", + "export", + _("tutti.action.exportProtocolCaracteristic"), + _("tutti.action.exportProtocolCaracteristic.tip"), + true + ); + } + + @Override + protected boolean prepareAction(ActionEvent event) { + + // choose file to import + file = TuttiUIUtil.chooseFile( + getContext().getMainUI(), + _("tutti.title.choose.protocolCaracteristicExportFile"), + _("tutti.action.chooseProtocolCaracteristicFile"), + null, + "^.*\\.csv", _("tutti.file.csv") + ); + boolean doAction = file != null; + if (doAction) { + super.prepareAction(event); + } + return doAction; + } + + @Override + protected void releaseAction(ActionEvent event) { + super.releaseAction(event); + file = null; + } + + @Override + protected void doAction(ActionEvent e) throws Exception { + + if (log.isInfoEnabled()) { + log.info("Will export protocol caracteristic to file: " + file); + } + + // bind to a protocol + TuttiProtocol protocol = getModel().toBean(); + + // export protocol caracteristics + TuttiProtocolImportExportService service = + getContext().getService(TuttiProtocolImportExportService.class); + + List<Caracteristic> allCaracteristic = getHandler().getAllCaracteristic(); + Map<String, Caracteristic> caracteristicMap = TuttiEntities.splitById(allCaracteristic); + + service.exportProtocolCaracteristic(file, protocol, caracteristicMap); + + sendMessage("Caractéristiques du Protocole [" + protocol.getName() + "] exportées dans le fichier."); + } +} \ No newline at end of file Property changes on: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ExportProtocolCaracteristicAction.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Added: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java (rev 0) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,93 @@ +package fr.ifremer.tutti.ui.swing.content.protocol; + +import fr.ifremer.tutti.persistence.entities.TuttiEntities; +import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; +import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; +import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; + +import java.awt.event.ActionEvent; +import java.io.File; +import java.util.List; +import java.util.Map; + +import static org.nuiton.i18n.I18n._; + +/** + * To import protocol caracteristics. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class ImportProtocolCaracteristicAction extends AbstractTuttiAction<EditProtocolUIModel, EditProtocolUIHandler> { + + private static final long serialVersionUID = 1L; + + /** Logger. */ + private static final Log log = + LogFactory.getLog(ImportProtocolCaracteristicAction.class); + + private File file; + + public ImportProtocolCaracteristicAction(EditProtocolUIHandler handler) { + super(handler, + "importProtocolCaracteristic", + "import", + _("tutti.action.importProtocolCaracteristic"), + _("tutti.action.importProtocolCaracteristic.tip"), + true + ); + } + + @Override + protected boolean prepareAction(ActionEvent event) { + + // choose file to import + file = TuttiUIUtil.chooseFile( + getContext().getMainUI(), + _("tutti.title.choose.protocolCaracteristicImportFile"), + _("tutti.action.chooseProtocolCaracteristicFile"), + null, + "^.*\\.csv", _("tutti.file.csv") + ); + boolean doAction = file != null; + if (doAction) { + super.prepareAction(event); + } + return doAction; + } + + @Override + protected void releaseAction(ActionEvent event) { + super.releaseAction(event); + file = null; + } + + @Override + protected void doAction(ActionEvent e) throws Exception { + + if (log.isInfoEnabled()) { + log.info("Will import protocol caracteristic file: " + file); + } + + // bind to a protocol + TuttiProtocol protocol = getModel().toBean(); + + // import protocol caracteristics + TuttiProtocolImportExportService service = + getContext().getService(TuttiProtocolImportExportService.class); + + List<Caracteristic> allCaracteristic = getHandler().getAllCaracteristic(); + Map<String,Caracteristic> caracteristicMap = TuttiEntities.splitById(allCaracteristic); + + service.importProtocolCaracteristic(file, protocol, caracteristicMap); + + // rebind to model + getModel().fromBean(protocol); + + sendMessage("Caractéristiques du Protocole [" + protocol.getName() + "] lu depuis le fichier."); + } +} \ No newline at end of file Property changes on: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolCaracteristicAction.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Added: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java (rev 0) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java 2013-01-31 15:26:25 UTC (rev 277) @@ -0,0 +1,86 @@ +package fr.ifremer.tutti.ui.swing.content.protocol; + +import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; +import fr.ifremer.tutti.service.protocol.TuttiProtocolImportExportService; +import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; +import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; + +import java.awt.event.ActionEvent; +import java.io.File; + +import static org.nuiton.i18n.I18n._; + +/** + * To import protocol species. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.0 + */ +public class ImportProtocolSpeciesAction extends AbstractTuttiAction<EditProtocolUIModel, EditProtocolUIHandler> { + + private static final long serialVersionUID = 1L; + + /** Logger. */ + private static final Log log = + LogFactory.getLog(ImportProtocolSpeciesAction.class); + + private File file; + + public ImportProtocolSpeciesAction(EditProtocolUIHandler handler) { + super(handler, + "importProtocolSpecies", + "import", + _("tutti.action.importProtocolSpecies"), + _("tutti.action.importProtocolSpecies.tip"), + true + ); + } + + @Override + protected boolean prepareAction(ActionEvent event) { + + // choose file to import + file = TuttiUIUtil.chooseFile( + getContext().getMainUI(), + _("tutti.title.choose.protocolSpeciesImportFile"), + _("tutti.action.chooseProtocolSpeciesFile"), + null, + "^.*\\.csv", _("tutti.file.csv") + ); + boolean doAction = file != null; + if (doAction) { + super.prepareAction(event); + } + return doAction; + } + + @Override + protected void releaseAction(ActionEvent event) { + super.releaseAction(event); + file = null; + } + + @Override + protected void doAction(ActionEvent e) throws Exception { + + if (log.isInfoEnabled()) { + log.info("Will import protocol species file: " + file); + } + + // bind to a protocol + TuttiProtocol protocol = getModel().toBean(); + + // import + TuttiProtocolImportExportService service = + getContext().getService(TuttiProtocolImportExportService.class); + + service.importProtocolSpecies(file, protocol); + + // rebind to model + getModel().fromBean(protocol); + + sendMessage("Espèces du Protocole [" + protocol.getName() + "] importées depuis le fichier."); + } +} \ No newline at end of file Property changes on: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/ImportProtocolSpeciesAction.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Added: svn:eol-style + native Modified: trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties =================================================================== --- trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties 2013-01-31 08:47:56 UTC (rev 276) +++ trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties 2013-01-31 15:26:25 UTC (rev 277) @@ -10,9 +10,10 @@ tutti.action.cancel.editProgram.tip=Annuler l'édition (ou la création) de la série de campagne tutti.action.cancel.editProtocol=Annuler tutti.action.cancel.editProtocol.tip=Annuler l'édition (ou la création) du protocole -tutti.action.cancel.editcruise= tutti.action.casino-import=Import Casino +tutti.action.chooseProtocolCaracteristicFile=Choisir le fichier des caractéristiques tutti.action.chooseProtocolFile=Choisir le fichier de protocole +tutti.action.chooseProtocolSpeciesFile=Choisir le fichier des espèces tutti.action.cloneProtocol=Cloner tutti.action.cloneProtocol.tip=Dupliquer le protocole sélectionné tutti.action.close=Fermer @@ -35,12 +36,20 @@ tutti.action.editSelectedProtocol.tip=Éditer le protocole sélectionnée tutti.action.exit=Quitter tutti.action.exit.tip=Quitter l'application +tutti.action.exportAllCaracteristic=Exporter toutes les caractéristiques +tutti.action.exportAllCaracteristic.tip=Exporter toutes les caractéristiques (sans les affecter à un écran) tutti.action.exportProtocol=Exporter tutti.action.exportProtocol.tip=Exporter le protocole sélectionné +tutti.action.exportProtocolCaracteristic=Exporter les caractéristiques +tutti.action.exportProtocolCaracteristic.tip=Exporter les caractéristiques du protocole tutti.action.generate=Générer tutti.action.generateCampaignName=Générer le nom tutti.action.importProtocol=Importer tutti.action.importProtocol.tip=Importer un protocole +tutti.action.importProtocolCaracteristic=Importer les caractéristiques +tutti.action.importProtocolCaracteristic.tip=importer les caractéristiques dans le protocole +tutti.action.importProtocolSpecies=Importer les espèces +tutti.action.importProtocolSpecies.tip=importer les espèces dans le protocole tutti.action.new=Nouveau tutti.action.newCruise=Nouveau tutti.action.newCruise.tip=Créer une nouvelle campagne @@ -103,9 +112,10 @@ tutti.dialog.askSaveBeforeLeaving.message=Vous avez fait des modifications qu vous n'avez pas enregistrées. Voulez-vous les enregistrer ? tutti.dialog.askSaveBeforeLeaving.title=Modifications non enregistrées tutti.duration.format=dj Hh m'm' -tutti.errorTable.title=Table d'erreurs +tutti.errorTable.title=Rapport de contrôles +tutti.file.csv=Extension d'un fichier csv tutti.file.protocol=Extension d'un fichier de protocole Tutti -tutti.jre.directory.description= +tutti.jre.directory.description=Répertoire de la jre tutti.label.attachmentEditor.file=Fichier tutti.label.attachmentEditor.fileComment=Commentaire tutti.label.attachmentEditor.fileName=Nom @@ -214,11 +224,16 @@ tutti.label.tab.fishingOperation.gearShooting=Mise en oeuvre de l'engin tutti.label.tab.fishingOperation.general=Trait tutti.label.tab.fishingOperation.hydrology=Paramètres hydrologiques +tutti.label.tab.fishingOperation.lengthClasses=Classes de taille tutti.label.tab.macroDechet=Macro déchets tutti.label.tab.observationIndividuel=Observations individuelles tutti.label.tab.plancton=Plancton tutti.label.tab.protocol.accidental=Accidental tutti.label.tab.protocol.benthos=Benthos +tutti.label.tab.protocol.caracteristic.environment=Environnement +tutti.label.tab.protocol.caracteristic.gear=Mise en oeuvre de l'engin +tutti.label.tab.protocol.caracteristic.hydrology=Paramètres hydrologiques +tutti.label.tab.protocol.caracteristic.lengthClasses=Classes de taille tutti.label.tab.protocol.fishingOperation=Trait tutti.label.tab.protocol.info=Informations générales tutti.label.tab.protocol.plankton=Plancton @@ -317,8 +332,10 @@ tutti.table.species.sampleCategory.header.weight=Poids (kg) tutti.timeeditor.H=H tutti.title.about=À propos de Tutti +tutti.title.choose.protocolCaracteristicImportFile=Choisir le fichier des caractéristiques à importer tutti.title.choose.protocolExportFile=Choisir le fichier où exporter le protocole tutti.title.choose.protocolImportFile=Choisir le fichier du protocole à importer +tutti.title.choose.protocolSpeciesImportFile= tutti.title.create.cruise=Créer une nouvelle campagne tutti.title.create.program=Créer une nouvelle série de campagne tutti.title.create.protocol=Créer un nouveau protocol de saisie Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-error.png ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-info.png ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-none.png ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-warning.png ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-protocol.png ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision HeadURL

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31 Jan '13

Author: kmorin Date: 2013-01-31 09:47:56 +0100 (Thu, 31 Jan 2013) New Revision: 276 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/276 Log: - change icons - display the alert number in the validator message widget tooltip + change the icon accroding to the alert types - replace popups by cardlayouts - add fileds to the species catch Added: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-error.png trunk/tutti-ui-swing/src/main/resources/icons/action-alert-info.png trunk/tutti-ui-swing/src/main/resources/icons/action-alert-none.png trunk/tutti-ui-swing/src/main/resources/icons/action-alert-warning.png trunk/tutti-ui-swing/src/main/resources/icons/action-protocol.png Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiBeanUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/EditSelectedProtocolAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/MainUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/EditCatchesAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/FishingOperationsUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.css trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.jaxx trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/macrowaste/MacroWasteBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/plankton/PlanktonBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.css trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.jaxx trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/FrequencyCellComponent.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUI.jaxx trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/CreateSpeciesBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUI.jaxx trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/CaracteristicTabUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/gearshooting/GearShootingTabUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/hydrology/HydrologyTabUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/program/EditProgramUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolSpeciesTableModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/AbstractTuttiTabContainerUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/CustomTab.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/SwingValidatorMessageWidget.java trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiBeanUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiBeanUIModel.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiBeanUIModel.java 2013-01-31 08:47:56 UTC (rev 276) @@ -97,8 +97,12 @@ } public String getTitle() { - return "test title"; + return null; } + + public String getIcon() { + return null; + } public boolean isModify() { return modify; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/AbstractTuttiUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -100,6 +100,8 @@ public abstract void onCloseUI(); public abstract M getModel(); + + public abstract SwingValidator<M> getValidator(); protected final TuttiUIContext context; @@ -286,6 +288,10 @@ Decorator<E> decorator = getDecorator(beanType, null); + if (data == null) { + data = Lists.newArrayList(); + } + if (log.isInfoEnabled()) { log.info("entity comboBox list [" + beanType.getName() + "] : " + (data == null ? 0 : data.size())); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/EditSelectedProtocolAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/EditSelectedProtocolAction.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/EditSelectedProtocolAction.java 2013-01-31 08:47:56 UTC (rev 276) @@ -48,7 +48,7 @@ public EditSelectedProtocolAction(MainUIHandler handler) { super(handler, "editProtocol", - "edit", + "protocol", _("tutti.action.editSelectedProtocol"), _("tutti.action.editSelectedProtocol.tip"), true Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/MainUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/MainUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/MainUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -138,6 +138,11 @@ return ui.getModel(); } + @Override + public SwingValidator<TuttiUIContext> getValidator() { + return null; + } + //------------------------------------------------------------------------// //-- Public methods --// //------------------------------------------------------------------------// Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -269,6 +269,11 @@ return ui.getModel(); } + @Override + public SwingValidator<EditCruiseUIModel> getValidator() { + return ui.getValidator(); + } + public static final String cruiseNameFormat = "%1$s_%2$s"; public void generateCampaignName() { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/EditCatchesAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/EditCatchesAction.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/EditCatchesAction.java 2013-01-31 08:47:56 UTC (rev 276) @@ -30,6 +30,7 @@ import fr.ifremer.tutti.ui.swing.TuttiUIContext; import java.awt.event.ActionEvent; +import org.apache.commons.logging.LogFactory; import static org.nuiton.i18n.I18n._; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css 2013-01-31 08:47:56 UTC (rev 276) @@ -30,6 +30,7 @@ #programLabel { text: "tutti.label.program"; + actionIcon: program; } #programCombobox { @@ -51,6 +52,7 @@ #cruiseLabel { text: "tutti.label.cruise"; labelFor: {cruiseCombobox}; + actionIcon: cruise; } #cruiseCombobox { @@ -72,6 +74,7 @@ #protocolLabel { text: "tutti.label.protocol"; labelFor: {protocolCombobox}; + actionIcon: protocol; } #protocolCombobox { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -43,6 +43,7 @@ import java.beans.PropertyChangeEvent; import java.beans.PropertyChangeListener; import java.util.List; +import jaxx.runtime.validator.swing.SwingValidator; /** * Main ui content to select cruise. @@ -72,6 +73,11 @@ } @Override + public SwingValidator<SelectCruiseUIModel> getValidator() { + return null; + } + + @Override public void beforeInitUI() { SelectCruiseUIModel model = new SelectCruiseUIModel(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -66,6 +66,8 @@ import java.beans.PropertyChangeEvent; import java.beans.PropertyChangeListener; import java.util.List; +import jaxx.runtime.SwingUtil; +import jaxx.runtime.validator.swing.SwingValidator; /** * Handler for UI {@link EditFishingOperationUI}. @@ -330,10 +332,6 @@ }); } - MainUI main = ui.getContextValue(MainUI.class, MainUI.class.getName()); - main.clearValidators(); - main.registerValidator(ui.getValidator()); - } @Override @@ -374,6 +372,9 @@ @Override public void onShowTab() { + MainUI main = ui.getContextValue(MainUI.class, MainUI.class.getName()); + main.clearValidators(); + main.registerValidator(ui.getValidator()); } @Override @@ -386,6 +387,11 @@ return ui.getModel(); } + @Override + public SwingValidator<EditFishingOperationUIModel> getValidator() { + return ui.getValidator(); + } + //------------------------------------------------------------------------// //-- Public methods --// //------------------------------------------------------------------------// Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java 2013-01-31 08:47:56 UTC (rev 276) @@ -54,9 +54,8 @@ private static final long serialVersionUID = 1L; - public static final String TITLE = - n_("tutti.label.tab.fishingOperation.general"); - + public static final String TITLE = n_("tutti.label.tab.fishingOperation.general"); + public static final String PROPERTY_PERSISTED = "persisted"; public static final String PROPERTY_EMPTY = "empty"; @@ -209,6 +208,7 @@ gearShootingEndLongitudeAsSexagecimal = SexagecimalPosition.valueOf(gearShootingEndLongitude); } + @Override public String getTitle() { return TITLE; } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/FishingOperationsUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/FishingOperationsUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/FishingOperationsUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -43,6 +43,7 @@ import java.beans.PropertyChangeEvent; import java.beans.PropertyChangeListener; import java.util.List; +import jaxx.runtime.validator.swing.SwingValidator; import static org.nuiton.i18n.I18n._; @@ -181,6 +182,11 @@ } @Override + public SwingValidator<FishingOperationsUIModel> getValidator() { + return null; + } + + @Override protected JTabbedPane getTabPanel() { return ui.getTabPane(); } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.css =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.css 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.css 2013-01-31 08:47:56 UTC (rev 276) @@ -238,6 +238,22 @@ text: "tutti.action.pupitri-import"; } +#benthosTab { + enabled: {false}; +} + +#planktonTab { + enabled: {false}; +} + +#macroWasteTab { + enabled: {false}; +} + +#accidentalTab { + enabled: {false}; +} + #observationIndividuelTab { enabled: {false}; } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.jaxx =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.jaxx 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUI.jaxx 2013-01-31 08:47:56 UTC (rev 276) @@ -31,7 +31,9 @@ fr.ifremer.tutti.ui.swing.content.operation.catches.macrowaste.MacroWasteBatchUI fr.ifremer.tutti.ui.swing.content.operation.catches.plankton.PlanktonBatchUI fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUI + fr.ifremer.tutti.ui.swing.content.operation.catches.species.frequency.SpeciesFrequencyUI fr.ifremer.tutti.ui.swing.content.operation.catches.species.split.CreateSpeciesBatchUI + fr.ifremer.tutti.ui.swing.content.operation.catches.species.split.SplitSpeciesBatchUI fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI org.jdesktop.swingx.JXTitledPanel @@ -294,12 +296,18 @@ </tab> <tab id='speciesTab' title='tutti.label.tab.species'> <JPanel id='speciesTabPanel'> - <JXTitledPanel id='speciesTabFishingOperationReminderLabel' constraints='"main"'> + <JXTitledPanel id='speciesTabFishingOperationReminderLabel' constraints='EditCatchesUIHandler.MAIN_CARD'> <SpeciesBatchUI id='speciesTabContent' constructorParams='this'/> </JXTitledPanel> - <JXTitledPanel id='speciesTabCreateBatchReminderLabel' constraints='"createBatch"'> + <JXTitledPanel id='speciesTabCreateBatchReminderLabel' constraints='EditCatchesUIHandler.CREATE_BATCH_CARD'> <CreateSpeciesBatchUI id='speciesTabCreateBatch' constructorParams='this'/> </JXTitledPanel> + <JXTitledPanel id='speciesTabSplitBatchReminderLabel' constraints='EditCatchesUIHandler.SPLIT_BATCH_CARD'> + <SplitSpeciesBatchUI id='speciesTabSplitBatch' constructorParams='this'/> + </JXTitledPanel> + <JXTitledPanel id='speciesTabFrequencyEditorLabel' constraints='EditCatchesUIHandler.EDIT_FREQUENCY_CARD'> + <SpeciesFrequencyUI id='speciesTabFrequencyEditor' constructorParams='speciesTabContent'/> + </JXTitledPanel> </JPanel> </tab> <tab id='benthosTab' title='tutti.label.tab.benthos'> Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -28,11 +28,19 @@ import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.service.PersistenceService; import fr.ifremer.tutti.ui.swing.AbstractTuttiBeanUIModel; +import fr.ifremer.tutti.ui.swing.MainUI; +import fr.ifremer.tutti.ui.swing.TuttiUI; import fr.ifremer.tutti.ui.swing.content.operation.FishingOperationsUI; import fr.ifremer.tutti.ui.swing.util.AbstractTuttiTabContainerUIHandler; import fr.ifremer.tutti.ui.swing.util.TabHandler; import fr.ifremer.tutti.ui.swing.util.TuttiBeanMonitor; +import java.awt.Component; +import java.awt.Container; +import java.awt.LayoutManager; +import javax.swing.JPanel; import javax.swing.JTabbedPane; +import jaxx.runtime.swing.CardLayout2Ext; +import jaxx.runtime.validator.swing.SwingValidator; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; @@ -43,6 +51,14 @@ public class EditCatchesUIHandler extends AbstractTuttiTabContainerUIHandler<EditCatchesUIModel> implements TabHandler { + public static final String MAIN_CARD = "main"; + + public static final String CREATE_BATCH_CARD = "createBatch"; + + public static final String SPLIT_BATCH_CARD = "splitBatch"; + + public static final String EDIT_FREQUENCY_CARD = "editFrequency"; + /** Logger. */ private static final Log log = LogFactory.getLog(EditCatchesUIHandler.class); @@ -131,6 +147,11 @@ } @Override + public SwingValidator<EditCatchesUIModel> getValidator() { + return ui.getValidator(); + } + + @Override protected JTabbedPane getTabPanel() { return ui.getTabPane(); } @@ -147,7 +168,7 @@ @Override public void onShowTab() { - + registerValidators(); } //------------------------------------------------------------------------// @@ -240,8 +261,51 @@ persistenceService.saveCatchBatch(catchBatch); } + protected void registerValidators() { + MainUI main = ui.getContextValue(MainUI.class, MainUI.class.getName()); + main.clearValidators(); + main.registerValidator(getValidator()); + main.registerValidator(ui.getSpeciesTabContent().getHandler().getValidator()); + } + public void importPupitri() { //TODO } + + public void setSelectedCard(String card) { + Component selectedComponent = getTabPanel().getSelectedComponent(); + if (selectedComponent.getClass().isAssignableFrom(JPanel.class)) { + JPanel panel = (JPanel) selectedComponent; + LayoutManager layoutManager = panel.getLayout(); + if (layoutManager.getClass().isAssignableFrom(CardLayout2Ext.class)) { + CardLayout2Ext layout = (CardLayout2Ext) layoutManager; + layout.setSelected(card); + + if (MAIN_CARD.equals(card)) { + registerValidators(); + + } else { + Container cardContainer = (Container)layout.getComponent(panel, card); + TuttiUI tuttiUi = null; + if (TuttiUI.class.isInstance(cardContainer)) { + tuttiUi = (TuttiUI) cardContainer; + + } else { + for (Component comp : cardContainer.getComponents()) { + if (TuttiUI.class.isInstance(comp)) { + tuttiUi = (TuttiUI) comp; + } + } + } + if (tuttiUi != null) { + MainUI main = ui.getContextValue(MainUI.class, MainUI.class.getName()); + main.clearValidators(); + main.registerValidator(tuttiUi.getHandler().getValidator()); + } + } + } + } + + } } \ No newline at end of file Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java 2013-01-31 08:47:56 UTC (rev 276) @@ -57,6 +57,10 @@ public static final String PROPERTY_SPECIES_TOTAL_SAMPLE_SORTED_WEIGHT = "speciesTotalSampleSortedWeight"; public static final String PROPERTY_SPECIES_TOTAL_UNSORTED_WEIGHT = "speciesTotalUnsortedWeight"; + + public static final String PROPERTY_SPECIES_TOTAL_INERT_WEIGHT = "speciesTotalInertWeight"; + + public static final String PROPERTY_SPECIES_TOTAL_LIVING_NOT_ITEMIZED_WEIGHT = "speciesTotalLivingNotItemizedWeight"; public static final String PROPERTY_BENTHOS_TOTAL_WEIGHT = "benthosTotalWeight"; @@ -82,6 +86,8 @@ PROPERTY_SPECIES_TOTAL_SORTED_WEIGHT, PROPERTY_SPECIES_TOTAL_UNSORTED_WEIGHT, PROPERTY_SPECIES_TOTAL_SAMPLE_SORTED_WEIGHT, + PROPERTY_SPECIES_TOTAL_INERT_WEIGHT, + PROPERTY_SPECIES_TOTAL_LIVING_NOT_ITEMIZED_WEIGHT, PROPERTY_BENTHOS_TOTAL_WEIGHT, PROPERTY_BENTHOS_TOTAL_SORTED_WEIGHT, PROPERTY_BENTHOS_TOTAL_UNSORTED_WEIGHT, @@ -97,6 +103,8 @@ PROPERTY_SPECIES_TOTAL_SORTED_WEIGHT, PROPERTY_SPECIES_TOTAL_UNSORTED_WEIGHT, PROPERTY_SPECIES_TOTAL_SAMPLE_SORTED_WEIGHT, + PROPERTY_SPECIES_TOTAL_INERT_WEIGHT, + PROPERTY_SPECIES_TOTAL_LIVING_NOT_ITEMIZED_WEIGHT, PROPERTY_BENTHOS_TOTAL_WEIGHT, PROPERTY_BENTHOS_TOTAL_SORTED_WEIGHT, PROPERTY_BENTHOS_TOTAL_UNSORTED_WEIGHT, @@ -114,6 +122,10 @@ protected Float speciesTotalUnsortedWeight; + protected Float speciesTotalInertWeight; + + protected Float speciesTotalLivingNotItemizedWeight; + protected Float benthosTotalWeight; protected Float benthosTotalSortedWeight; @@ -260,7 +272,27 @@ this.speciesTotalUnsortedWeight = speciesTotalUnsortedWeight; firePropertyChange(PROPERTY_SPECIES_TOTAL_UNSORTED_WEIGHT, oldValue, speciesTotalUnsortedWeight); } + + public Float getSpeciesTotalInertWeight() { + return speciesTotalInertWeight; + } + public void setSpeciesTotalInertWeight(Float speciesTotalInertWeight) { + Object oldValue = getSpeciesTotalInertWeight(); + this.speciesTotalInertWeight = speciesTotalInertWeight; + firePropertyChange(PROPERTY_SPECIES_TOTAL_INERT_WEIGHT, oldValue, speciesTotalInertWeight); + } + + public Float getSpeciesTotalLivingNotItemizedWeight() { + return speciesTotalLivingNotItemizedWeight; + } + + public void setSpeciesTotalLivingNotItemizedWeight(Float speciesTotalLivingNotItemizedWeight) { + Object oldValue = getSpeciesTotalLivingNotItemizedWeight(); + this.speciesTotalLivingNotItemizedWeight = speciesTotalLivingNotItemizedWeight; + firePropertyChange(PROPERTY_SPECIES_TOTAL_LIVING_NOT_ITEMIZED_WEIGHT, oldValue, speciesTotalLivingNotItemizedWeight); + } + public Float getBenthosTotalWeight() { return benthosTotalWeight; } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -44,6 +44,7 @@ import org.nuiton.util.decorator.Decorator; import java.util.List; +import jaxx.runtime.validator.swing.SwingValidator; import static org.nuiton.i18n.I18n.n_; @@ -181,6 +182,11 @@ } @Override + public SwingValidator<AccidentalBatchUIModel> getValidator() { + return null; + } + + @Override public void beforeInitUI() { if (log.isInfoEnabled()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -44,6 +44,7 @@ import org.nuiton.util.decorator.Decorator; import java.util.List; +import jaxx.runtime.validator.swing.SwingValidator; import static org.nuiton.i18n.I18n.n_; @@ -184,6 +185,11 @@ } @Override + public SwingValidator<BenthosBatchUIModel> getValidator() { + return ui.getValidator(); + } + + @Override public void beforeInitUI() { if (log.isInfoEnabled()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/macrowaste/MacroWasteBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/macrowaste/MacroWasteBatchUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/macrowaste/MacroWasteBatchUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -43,6 +43,7 @@ import org.nuiton.util.decorator.Decorator; import java.util.List; +import jaxx.runtime.validator.swing.SwingValidator; import static org.nuiton.i18n.I18n.n_; @@ -186,6 +187,11 @@ } @Override + public SwingValidator<MacroWasteBatchUIModel> getValidator() { + return ui.getValidator(); + } + + @Override public void beforeInitUI() { if (log.isInfoEnabled()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/plankton/PlanktonBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/plankton/PlanktonBatchUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/plankton/PlanktonBatchUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -44,6 +44,7 @@ import org.nuiton.util.decorator.Decorator; import java.util.List; +import jaxx.runtime.validator.swing.SwingValidator; import static org.nuiton.i18n.I18n.n_; @@ -182,6 +183,11 @@ } @Override + public SwingValidator<PlanktonBatchUIModel> getValidator() { + return ui.getValidator(); + } + + @Override public void beforeInitUI() { if (log.isInfoEnabled()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.css =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.css 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.css 2013-01-31 08:47:56 UTC (rev 276) @@ -37,7 +37,6 @@ #speciesTotalWeightField { property: speciesTotalWeight; model: {model.getSpeciesTotalWeight()}; - useFloat: false; numberPattern: {INT_6_DIGITS_PATTERN}; } @@ -49,7 +48,6 @@ #speciesTotalSortedWeightField { property: speciesTotalSortedWeight; model: {model.getSpeciesTotalSortedWeight()}; - useFloat: false; numberPattern: {INT_6_DIGITS_PATTERN}; } @@ -61,7 +59,6 @@ #speciesTotalSampleSortedWeightField { property: speciesTotalSampleSortedWeight; model: {model.getSpeciesTotalSampleSortedWeight()}; - useFloat: false; numberPattern: {INT_6_DIGITS_PATTERN}; } @@ -76,6 +73,29 @@ enabled: false; } +#speciesTotalInertWeightLabel { + text: "tutti.label.catches.speciesTotalInertWeight"; + labelFor: {speciesTotalInertWeightField}; +} + +#speciesTotalInertWeightField { + property: speciesTotalInertWeight; + model: {model.getSpeciesTotalInertWeight()}; + numberPattern: {INT_6_DIGITS_PATTERN}; +} + +#speciesTotalLivingNotItemizedWeightLabel { + text: "tutti.label.catches.speciesTotalLivingNotItemizedWeight"; + labelFor: {speciesTotalLivingNotItemizedWeightField}; +} + +#speciesTotalLivingNotItemizedWeightField { + property: speciesTotalLivingNotItemizedWeight; + model: {model.getSpeciesTotalLivingNotItemizedWeight()}; + numberPattern: {INT_6_DIGITS_PATTERN}; +} + + #tablePopup { label: "tutti.title.batchActions"; } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.jaxx =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.jaxx 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUI.jaxx 2013-01-31 08:47:56 UTC (rev 276) @@ -124,6 +124,24 @@ <JTextField id='speciesTotalUnsortedWeightField'/> </cell> </row> + +  + <row> + <cell> + <JLabel id='speciesTotalInertWeightLabel'/> + </cell> + <cell> + <NumberEditor id='speciesTotalInertWeightField' + constructorParams='this'/> + </cell> + <cell> + <JLabel id='speciesTotalLivingNotItemizedWeightLabel'/> + </cell> + <cell> + <NumberEditor id='speciesTotalLivingNotItemizedWeightField' + constructorParams='this'/> + </cell> + </row>  <row> Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -44,10 +44,10 @@ import fr.ifremer.tutti.ui.swing.TuttiUI; import fr.ifremer.tutti.ui.swing.content.operation.AbstractTuttiBatchTableUIHandler; import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUIHandler; import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUIModel; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.frequency.FrequencyCellComponent; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.frequency.SpeciesFrequencyRowModel; -import fr.ifremer.tutti.ui.swing.content.operation.catches.species.frequency.SpeciesFrequencyUI; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.split.CreateSpeciesBatchUI; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.split.CreateSpeciesBatchUIModel; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.split.SplitSpeciesBatchRowModel; @@ -79,9 +79,8 @@ import java.util.List; import java.util.Set; import jaxx.runtime.SwingUtil; -import jaxx.runtime.swing.CardLayout2Ext; +import jaxx.runtime.validator.swing.SwingValidator; -import static org.nuiton.i18n.I18n._; import static org.nuiton.i18n.I18n.n_; /** @@ -118,12 +117,6 @@ */ private final SpeciesBatchUI ui; - private SplitSpeciesBatchUI splitSpeciesBatchEditor; - - private CreateSpeciesBatchUI createSpeciesBatchEditor; - - private SpeciesFrequencyUI speciesFrequencyEditor; - private final EnumMap<TableViewMode, RowFilter<SpeciesBatchTableModel, Integer>> tableFilters; public SpeciesBatchUIHandler(TuttiUI<?, ?> parentUi, @@ -381,6 +374,11 @@ } @Override + public SwingValidator<SpeciesBatchUIModel> getValidator() { + return ui.getValidator(); + } + + @Override public void beforeInitUI() { if (log.isInfoEnabled()) { @@ -625,27 +623,11 @@ } - @Override public void onCloseUI() { if (log.isInfoEnabled()) { log.info("Closing: " + ui); } - - if (splitSpeciesBatchEditor != null) { - getContext().getSwingSession().add(splitSpeciesBatchEditor); - closeUI(splitSpeciesBatchEditor); - } - - if (createSpeciesBatchEditor != null) { - getContext().getSwingSession().add(createSpeciesBatchEditor); - closeUI(createSpeciesBatchEditor); - } - - if (speciesFrequencyEditor != null) { - getContext().getSwingSession().add(speciesFrequencyEditor); - closeUI(speciesFrequencyEditor); - } } //------------------------------------------------------------------------// @@ -658,9 +640,7 @@ CreateSpeciesBatchUI createBatchEditor = parent.getSpeciesTabCreateBatch(); createBatchEditor.getHandler().openUI(getModel()); - - CardLayout2Ext card = (CardLayout2Ext) parent.getSpeciesTabPanel().getLayout(); - card.setSelected("createBatch"); + parent.getHandler().setSelectedCard(EditCatchesUIHandler.CREATE_BATCH_CARD); } public void addSpeciesBatch(CreateSpeciesBatchUIModel createModel) { @@ -708,23 +688,27 @@ if (log.isInfoEnabled()) { log.info("Open split batch ui for row [" + rowIndex + ']'); } - SplitSpeciesBatchUI splitBatchEditor = getSplitSpeciesBatchEditor(); + + EditCatchesUI parent = SwingUtil.getParentContainer(ui, EditCatchesUI.class); + SplitSpeciesBatchUI splitBatchEditor = parent.getSpeciesTabSplitBatch(); + splitBatchEditor.getHandler().editBatch(parentBatch); + parent.getHandler().setSelectedCard(EditCatchesUIHandler.SPLIT_BATCH_CARD); + } - openDialog(ui, - splitBatchEditor, - _("tutti.title.splitBatch"), - ui.getPreferredSize()); + public void splitBatch(SplitSpeciesBatchUIModel splitModel) { + if (splitModel.isValid()) { - // at close, synch back batches ? - SplitSpeciesBatchUIModel splitModel = splitBatchEditor.getModel(); + JXTable table = getTable(); - if (splitModel.isValid()) { + // get selected row + int insertRow = table.getSelectedRow(); + + SpeciesBatchTableModel tableModel = getTableModel(); + SpeciesBatchRowModel parentBatch = tableModel.getEntry(insertRow); // create batch rows - int insertRow = rowIndex; - SampleCategoryType selectedCategory = splitModel.getSelectedCategory(); SampleCategoryEnum sampleCategoryEnum = selectedCategory.getType(); @@ -760,9 +744,6 @@ saveRows(newBatches); } - // reset split ui - splitBatchEditor.getHandler().editBatch(null); - recomputeBatchActionEnable(); // // reselect this cell @@ -898,27 +879,6 @@ } - public SplitSpeciesBatchUI getSplitSpeciesBatchEditor() { - if (splitSpeciesBatchEditor == null) { - splitSpeciesBatchEditor = new SplitSpeciesBatchUI(ui); - } - return splitSpeciesBatchEditor; - } - - public CreateSpeciesBatchUI getCreateSpeciesBatchEditor() { - if (createSpeciesBatchEditor == null) { - createSpeciesBatchEditor = new CreateSpeciesBatchUI(ui); - } - return createSpeciesBatchEditor; - } - - public SpeciesFrequencyUI getSpeciesFrequencyEditor() { - if (speciesFrequencyEditor == null) { - speciesFrequencyEditor = new SpeciesFrequencyUI(ui); - } - return speciesFrequencyEditor; - } - public void updateTotalFromFrequencies(SpeciesBatchRowModel row) { Float totalNumber = null; Float totalWeight = null; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIModel.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIModel.java 2013-01-31 08:47:56 UTC (rev 276) @@ -121,7 +121,9 @@ EditCatchesUIModel.PROPERTY_SPECIES_TOTAL_WEIGHT, EditCatchesUIModel.PROPERTY_SPECIES_TOTAL_SORTED_WEIGHT, EditCatchesUIModel.PROPERTY_SPECIES_TOTAL_UNSORTED_WEIGHT, - EditCatchesUIModel.PROPERTY_SPECIES_TOTAL_SAMPLE_SORTED_WEIGHT); + EditCatchesUIModel.PROPERTY_SPECIES_TOTAL_SAMPLE_SORTED_WEIGHT, + EditCatchesUIModel.PROPERTY_SPECIES_TOTAL_INERT_WEIGHT, + EditCatchesUIModel.PROPERTY_SPECIES_TOTAL_LIVING_NOT_ITEMIZED_WEIGHT); } public Float getSpeciesTotalWeight() { @@ -156,6 +158,22 @@ catchesUIModel.setSpeciesTotalUnsortedWeight(speciesTotalUnsortedWeight); } + public Float getSpeciesTotalInertWeight() { + return catchesUIModel.getSpeciesTotalInertWeight(); + } + + public void setSpeciesTotalInertWeight(Float speciesTotalInertWeight) { + catchesUIModel.setSpeciesTotalInertWeight(speciesTotalInertWeight); + } + + public Float getSpeciesTotalLivingNotItemizedWeight() { + return catchesUIModel.getSpeciesTotalLivingNotItemizedWeight(); + } + + public void setSpeciesTotalLivingNotItemizedWeight(Float speciesTotalLivingNotItemizedWeight) { + catchesUIModel.setSpeciesTotalLivingNotItemizedWeight(speciesTotalLivingNotItemizedWeight); + } + public List<SampleCategoryType> getSamplingOrder() { return samplingOrder; } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/FrequencyCellComponent.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/FrequencyCellComponent.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/FrequencyCellComponent.java 2013-01-31 08:47:56 UTC (rev 276) @@ -26,10 +26,13 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUIHandler; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchRowModel; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchTableModel; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUI; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUIHandler; +import fr.ifremer.tutti.ui.swing.content.operation.catches.species.split.CreateSpeciesBatchUI; import fr.ifremer.tutti.ui.swing.util.table.AbstractSelectTableAction; import fr.ifremer.tutti.ui.swing.util.table.ColumnIdentifier; import jaxx.runtime.SwingUtil; @@ -49,6 +52,7 @@ import java.awt.event.MouseEvent; import java.util.List; import javax.swing.table.DefaultTableCellRenderer; +import jaxx.runtime.swing.CardLayout2Ext; import static org.nuiton.i18n.I18n._; @@ -137,19 +141,16 @@ log.info("Will edit frequencies for row: " + rowIndex); } - SpeciesBatchUIHandler handler = ui.getHandler(); - SpeciesFrequencyUI frequencyEditor = - handler.getSpeciesFrequencyEditor(); - frequencyEditor.editBatch(editRow); + EditCatchesUI parent = SwingUtil.getParentContainer(ui, EditCatchesUI.class); + SpeciesFrequencyUI frequencyEditor = parent.getSpeciesTabFrequencyEditor(); - // open frequency dialog - handler.openDialog(ui, - frequencyEditor, - _("tutti.title.frequency"), - ui.getPreferredSize()); + frequencyEditor.getHandler().editBatch(editRow, this); - SpeciesFrequencyUIModel frequencyModel = frequencyEditor.getModel(); - + // open frequency editor + parent.getHandler().setSelectedCard(EditCatchesUIHandler.EDIT_FREQUENCY_CARD); + } + + public void validateEdition(SpeciesFrequencyUIModel frequencyModel) { if (frequencyModel.isValid()) { // at close, synch back frequencies @@ -173,11 +174,9 @@ editRow.setFrequency(frequency); // update frequencies total - handler.updateTotalFromFrequencies(editRow); + ui.getHandler().updateTotalFromFrequencies(editRow); } - frequencyEditor.editBatch(null); - int r = rowIndex; int c = columnIndex; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUI.jaxx =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUI.jaxx 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUI.jaxx 2013-01-31 08:47:56 UTC (rev 276) @@ -26,10 +26,11 @@ <import> fr.ifremer.tutti.persistence.entities.referential.Caracteristic - + + fr.ifremer.tutti.ui.swing.TuttiUI fr.ifremer.tutti.ui.swing.TuttiUIContext + fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchRowModel - fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUI jaxx.runtime.swing.CardLayout2Ext jaxx.runtime.swing.editor.bean.BeanComboBox @@ -52,17 +53,13 @@ <script><![CDATA[ - public SpeciesFrequencyUI(SpeciesBatchUI parentUI) { + public SpeciesFrequencyUI(TuttiUI parentUI) { JAXXUtil.initContext(this, parentUI); SpeciesFrequencyUIHandler handler = new SpeciesFrequencyUIHandler(parentUI.getHandler().getContext(), this); setContextValue(handler); handler.beforeInitUI(); } - public void editBatch(SpeciesBatchRowModel row) { - handler.editBatch(row); - } - protected void $afterCompleteSetup() { handler.afterInitUI(); } @@ -85,124 +82,112 @@ <CardLayout2Ext id='modeConfigurationLayout' constructorParams='this, "modeConfigurationPanel"'/> - <JSplitPane id='splitPane' constraints='BorderLayout.CENTER'> + <JPanel id='configurationPanel' layout='{new BorderLayout()}' + constraints='BorderLayout.NORTH'> - <JPanel layout='{new BorderLayout()}'> + <JPanel layout='{new BorderLayout()}' constraints='BorderLayout.CENTER'> + <VBox id='modePanel' constraints='BorderLayout.WEST' + verticalAlignment='{SwingConstants.CENTER}'> + <JRadioButton id='simpleModeButton' + onActionPerformed='model.setConfigurationMode(SpeciesFrequencyUIModel.ConfigurationMode.SIMPLE)'/> + <JRadioButton id='autoGenModeButton' + onActionPerformed='model.setConfigurationMode(SpeciesFrequencyUIModel.ConfigurationMode.AUTO_GEN)'/> + <JRadioButton id='rafaleModeButton' + onActionPerformed='model.setConfigurationMode(SpeciesFrequencyUIModel.ConfigurationMode.RAFALE)'/> + </VBox> - <JPanel id='configurationPanel' layout='{new BorderLayout()}' - constraints='BorderLayout.NORTH'> - - <JPanel layout='{new BorderLayout()}' constraints='BorderLayout.CENTER'> - <VBox id='modePanel' constraints='BorderLayout.WEST' - verticalAlignment='{SwingConstants.CENTER}'> - <JRadioButton id='simpleModeButton' - onActionPerformed='model.setConfigurationMode(SpeciesFrequencyUIModel.ConfigurationMode.SIMPLE)'/> - <JRadioButton id='autoGenModeButton' - onActionPerformed='model.setConfigurationMode(SpeciesFrequencyUIModel.ConfigurationMode.AUTO_GEN)'/> - <JRadioButton id='rafaleModeButton' - onActionPerformed='model.setConfigurationMode(SpeciesFrequencyUIModel.ConfigurationMode.RAFALE)'/> - </VBox> - - <JPanel id='modeConfigurationPanel' constraints='BorderLayout.CENTER'> - <JPanel id='simpleModePanel' constraints='"simpleMode"' - layout='{new BorderLayout()}'> - <JLabel id='simpleModeLabel' constraints='BorderLayout.CENTER'/> - </JPanel> - <JPanel id='autoGenModePanel' constraints='"autoGenMode"'> - <Table fill='both' constraints='BorderLayout.SOUTH'> -  - <row> - <cell anchor='west'> - <JLabel id='minStepLabel'/> - </cell> - <cell weightx='1.0'> - <NumberEditor id='minStepField' constructorParams='this'/> - </cell> - </row> -  - <row> - <cell anchor='west'> - <JLabel id='maxStepLabel'/> - </cell> - <cell weightx='1.0'> - <NumberEditor id='maxStepField' constructorParams='this'/> - </cell> - </row> -  - <row> - <cell columns='2'> - <JPanel layout='{new GridLayout(1, 0)}'> - <JButton id='generateButton' - onActionPerformed='handler.generateLengthSteps()'/> - </JPanel> - </cell> - </row> - </Table> - </JPanel> - <JPanel id='rafaleModePanel' constraints='"rafaleMode"'> - <Table fill='both' constraints='BorderLayout.SOUTH'> -  - <row> - <cell weightx='1.0'> - <JLabel id='rafaleStepLabel'/> - </cell> - </row> - <row> - <cell weightx='1.0'> - <NumberEditor id='rafaleStepField' - constructorParams='this'/> - </cell> - </row> - </Table> - </JPanel> - </JPanel> + <JPanel id='modeConfigurationPanel' constraints='BorderLayout.CENTER'> + <JPanel id='simpleModePanel' constraints='"simpleMode"' + layout='{new BorderLayout()}'> + <JLabel id='simpleModeLabel' constraints='BorderLayout.CENTER'/> </JPanel> - <Table fill='both' constraints='BorderLayout.SOUTH'> - <row> - <cell columns='2'> - <JSeparator/> - </cell> - </row> -  - <row> - <cell anchor='west'> - <JLabel id='lengthStepCaracteristicLabel'/> - </cell> - <cell weightx='1.0'> - <BeanComboBox id='lengthStepCaracteristicComboBox' - constructorParams='this' - genericType='Caracteristic'/> - </cell> - </row> -  - <row> - <cell anchor='west'> - <JLabel id='stepLabel'/> - </cell> - <cell weightx='1.0'> - <NumberEditor id='stepField' constructorParams='this'/> - </cell> - </row> - </Table> + <JPanel id='autoGenModePanel' constraints='"autoGenMode"'> + <Table fill='both' constraints='BorderLayout.SOUTH'> +  + <row> + <cell anchor='west'> + <JLabel id='minStepLabel'/> + </cell> + <cell weightx='1.0'> + <NumberEditor id='minStepField' constructorParams='this'/> + </cell> + </row> +  + <row> + <cell anchor='west'> + <JLabel id='maxStepLabel'/> + </cell> + <cell weightx='1.0'> + <NumberEditor id='maxStepField' constructorParams='this'/> + </cell> + </row> +  + <row> + <cell columns='2'> + <JPanel layout='{new GridLayout(1, 0)}'> + <JButton id='generateButton' + onActionPerformed='handler.generateLengthSteps()'/> + </JPanel> + </cell> + </row> + </Table> + </JPanel> + <JPanel id='rafaleModePanel' constraints='"rafaleMode"'> + <Table fill='both' constraints='BorderLayout.SOUTH'> +  + <row> + <cell weightx='1.0'> + <JLabel id='rafaleStepLabel'/> + </cell> + </row> + <row> + <cell weightx='1.0'> + <NumberEditor id='rafaleStepField' + constructorParams='this'/> + </cell> + </row> + </Table> + </JPanel> </JPanel> + </JPanel> + <Table fill='both' constraints='BorderLayout.SOUTH'> + <row> + <cell columns='2'> + <JSeparator/> + </cell> + </row> +  + <row> + <cell anchor='west'> + <JLabel id='lengthStepCaracteristicLabel'/> + </cell> + <cell weightx='1.0'> + <BeanComboBox id='lengthStepCaracteristicComboBox' + constructorParams='this' + genericType='Caracteristic'/> + </cell> + </row> +  + <row> + <cell anchor='west'> + <JLabel id='stepLabel'/> + </cell> + <cell weightx='1.0'> + <NumberEditor id='stepField' constructorParams='this'/> + </cell> + </row> + </Table> + </JPanel> - <JScrollPane id='tableScrollPane' constraints='BorderLayout.CENTER'> - <JXTable id='table'/> - </JScrollPane> + <JScrollPane id='tableScrollPane' constraints='BorderLayout.CENTER'> + <JXTable id='table'/> + </JScrollPane> -  - <JPanel id='actionPanel' layout='{new GridLayout(1, 0)}' - constraints='BorderLayout.SOUTH'> - <JButton id='cancelButton' onActionPerformed='handler.cancel()'/> - <JButton id='saveButton' onActionPerformed='handler.save()'/> - </JPanel> +  + <JPanel id='actionPanel' layout='{new GridLayout(1, 0)}' + constraints='BorderLayout.SOUTH'> + <JButton id='cancelButton' onActionPerformed='handler.cancel()'/> + <JButton id='saveButton' onActionPerformed='handler.save()'/> + </JPanel> - </JPanel> -  - <JPanel id='messagePanel' layout='{new GridLayout()}'> - <JScrollPane columnHeaderView='{errorTable.getTableHeader()}'> - <JTable id='errorTable'/> - </JScrollPane> - </JPanel> - </JSplitPane> </JPanel> \ No newline at end of file Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/frequency/SpeciesFrequencyUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -34,8 +34,11 @@ import fr.ifremer.tutti.persistence.entities.referential.Species; import fr.ifremer.tutti.ui.swing.TuttiUI; import fr.ifremer.tutti.ui.swing.TuttiUIContext; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUIHandler; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchRowModel; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUIHandler; +import fr.ifremer.tutti.ui.swing.content.operation.catches.species.frequency.FrequencyCellComponent.FrequencyCellEditor; import fr.ifremer.tutti.ui.swing.util.Cancelable; import fr.ifremer.tutti.ui.swing.util.TuttiBeanMonitor; import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; @@ -55,6 +58,9 @@ import java.util.Collections; import java.util.List; import java.util.Map; +import jaxx.runtime.SwingUtil; +import jaxx.runtime.swing.CardLayout2Ext; +import jaxx.runtime.validator.swing.SwingValidator; /** * @author tchemit <chemit(a)codelutin.com> @@ -72,12 +78,14 @@ * @since 0.2 */ private final SpeciesFrequencyUI ui; + + private FrequencyCellEditor frequencyEditor; private TuttiProtocol protocol; private Map<String, SpeciesProtocol> speciesProtocol; - private Map<String, Caracteristic> lengthSteCaracteristic; + private Map<String, Caracteristic> lengthStepCaracteristics; public SpeciesFrequencyUIHandler(TuttiUIContext context, SpeciesFrequencyUI ui) { @@ -150,6 +158,11 @@ } @Override + public SwingValidator<SpeciesFrequencyUIModel> getValidator() { + return ui.getValidator(); + } + + @Override public void beforeInitUI() { SpeciesFrequencyUIModel model = new SpeciesFrequencyUIModel(); @@ -166,7 +179,7 @@ SpeciesBatchUIHandler.FREQUENCY_LENGTH_CONTEXT_ENTRY.getContextValue(ui); Preconditions.checkNotNull(lengthStepCaracterics); - lengthSteCaracteristic = TuttiEntities.splitById(lengthStepCaracterics); + lengthStepCaracteristics = TuttiEntities.splitById(lengthStepCaracterics); SpeciesFrequencyUIModel model = getModel(); @@ -270,9 +283,6 @@ initTable(table); - SwingValidatorUtil.installUI(ui.getErrorTable(), - new SwingValidatorMessageTableRenderer()); - listenValidatorValid(ui.getValidator(), model); } @@ -281,6 +291,17 @@ if (log.isInfoEnabled()) { log.info("closing: " + ui); } + + frequencyEditor = null; + + // evict model from validator + ui.getValidator().setBean(null); + + // when canceling always invalid model (in that way) + getModel().setValid(false); + + EditCatchesUI parent = SwingUtil.getParentContainer(ui, EditCatchesUI.class); + parent.getHandler().setSelectedCard(EditCatchesUIHandler.MAIN_CARD); } //------------------------------------------------------------------------// @@ -294,14 +315,8 @@ log.info("Cancel UI " + ui); } - // evict model from validator - ui.getValidator().setBean(null); - - // when canceling always invalid model (in that way) - getModel().setValid(false); - // close dialog - closeDialog(ui); + closeUI(ui); } //------------------------------------------------------------------------// @@ -380,8 +395,10 @@ getTable().scrollRowToVisible(rowIndex); } - public void editBatch(SpeciesBatchRowModel speciesBatch) { + public void editBatch(SpeciesBatchRowModel speciesBatch, FrequencyCellEditor editor) { + frequencyEditor = editor; + Caracteristic lengthStepCaracteristic = null; Float lengthStep = 1f; @@ -440,7 +457,7 @@ String lengthStepPmfmId = sProtocol.getLengthStepPmfmId(); lengthStepCaracteristic = - lengthSteCaracteristic.get(lengthStepPmfmId); + this.lengthStepCaracteristics.get(lengthStepPmfmId); lengthStep = sProtocol.getLengthStep(); if (log.isInfoEnabled()) { @@ -478,7 +495,9 @@ log.info("Save UI " + ui); } - closeDialog(ui); + frequencyEditor.validateEdition(getModel()); + + closeUI(ui); } //------------------------------------------------------------------------// Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesAction.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesAction.java 2013-01-31 08:47:56 UTC (rev 276) @@ -31,6 +31,7 @@ import fr.ifremer.tutti.service.PersistenceService; import fr.ifremer.tutti.ui.swing.AbstractTuttiAction; import fr.ifremer.tutti.ui.swing.TuttiUIContext; +import java.awt.Dimension; import java.awt.event.ActionEvent; import java.awt.event.ActionListener; import java.util.List; @@ -51,7 +52,7 @@ /** Logger. */ private static final Log log = LogFactory.getLog(AddSpeciesAction.class); - protected AddSpeciesUI popup; +// protected AddSpeciesUI popup; protected List<Species> allSpecies; @@ -64,15 +65,6 @@ false ); - popup = new AddSpeciesUI(getHandler().getUi()); - popup.getValidateButton().addActionListener(new ActionListener() { - - @Override - public void actionPerformed(ActionEvent e) { - getHandler().closeDialog(popup); - } - }); - TuttiPersistence persistenceService = getContext().getService(PersistenceService.class); allSpecies = persistenceService.getAllSpecies(); } @@ -80,30 +72,25 @@ @Override protected void doAction(ActionEvent event) { CreateSpeciesBatchUIHandler handler = getHandler(); - AddSpeciesUIModel model = popup.getModel(); - model.setSelectedSpecies(null); List<Species> availableSpecies = handler.getModel().getAvailableSpecies(); - List<Species> species = Lists.newArrayList(allSpecies); + final List<Species> species = Lists.newArrayList(allSpecies); species.removeAll(availableSpecies); - model.setSpecies(species); // open the popup asynchronously because the setVisible(true) method returns // only after setVisible(false) has been called and this prevents the loading to hide. SwingUtilities.invokeLater(new Runnable() { @Override public void run() { -// getHandler().openDialog(popup, _("tutti.title.createBatch")); - - Species species = popup.getModel().getSelectedSpecies(); + Species selectedSpecies = getHandler().openAddSpeciesDialog( _("tutti.title.createBatch"), species); if (species != null) { CreateSpeciesBatchUIHandler handler = getHandler(); CreateSpeciesBatchUIModel model = handler.getModel(); List<Species> availableSpecies = Lists.newArrayList(model.getAvailableSpecies()); - availableSpecies.add(species); + availableSpecies.add(selectedSpecies); model.setAvailableSpecies(availableSpecies); - model.setSpecies(species); + model.setSpecies(selectedSpecies); } } }); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/AddSpeciesUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -39,6 +39,7 @@ import java.util.List; import javax.swing.JDialog; import jaxx.runtime.SwingUtil; +import jaxx.runtime.validator.swing.SwingValidator; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; @@ -80,5 +81,10 @@ public AddSpeciesUIModel getModel() { return ui.getModel(); } + + @Override + public SwingValidator<AddSpeciesUIModel> getValidator() { + return null; + } } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/CreateSpeciesBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/CreateSpeciesBatchUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/CreateSpeciesBatchUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -34,12 +34,10 @@ import fr.ifremer.tutti.ui.swing.AbstractTuttiUIHandler; import fr.ifremer.tutti.ui.swing.TuttiUI; import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI; -import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUI; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUIHandler; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUIModel; import fr.ifremer.tutti.ui.swing.util.Cancelable; import java.awt.Dimension; -import jaxx.runtime.validator.swing.SwingValidatorMessageTableRenderer; -import jaxx.runtime.validator.swing.SwingValidatorUtil; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; @@ -48,6 +46,7 @@ import java.util.List; import jaxx.runtime.SwingUtil; import jaxx.runtime.swing.CardLayout2Ext; +import jaxx.runtime.validator.swing.SwingValidator; /** * Handler of {@link CreateSpeciesBatchUI}. @@ -178,9 +177,7 @@ getModel().setValid(false); EditCatchesUI parent = SwingUtil.getParentContainer(ui, EditCatchesUI.class); - - CardLayout2Ext card = (CardLayout2Ext) parent.getSpeciesTabPanel().getLayout(); - card.setSelected("main"); + parent.getHandler().setSelectedCard(EditCatchesUIHandler.MAIN_CARD); } @@ -189,6 +186,11 @@ return ui.getModel(); } + @Override + public SwingValidator<CreateSpeciesBatchUIModel> getValidator() { + return ui.getValidator(); + } + //------------------------------------------------------------------------// //-- Cancelable methods --// //------------------------------------------------------------------------// @@ -249,8 +251,15 @@ closeUI(ui); } - public CreateSpeciesBatchUI getUi() { - return ui; + public Species openAddSpeciesDialog(String title, List<Species> species) { + AddSpeciesUI dialog = new AddSpeciesUI(ui); + AddSpeciesUIModel model = dialog.getModel(); + model.setSelectedSpecies(null); + model.setSpecies(species); + + openDialog(ui, dialog, title, new Dimension(400, 130)); + + return model.getSelectedSpecies(); } } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUI.jaxx =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUI.jaxx 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUI.jaxx 2013-01-31 08:47:56 UTC (rev 276) @@ -25,6 +25,7 @@ implements='fr.ifremer.tutti.ui.swing.TuttiUI<SplitSpeciesBatchUIModel, SplitSpeciesBatchUIHandler>'> <import> + fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI fr.ifremer.tutti.ui.swing.content.operation.catches.species.SampleCategoryType fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchUI @@ -47,7 +48,7 @@ <script><![CDATA[ -public SplitSpeciesBatchUI(SpeciesBatchUI parentUI) { +public SplitSpeciesBatchUI(EditCatchesUI parentUI) { JAXXUtil.initContext(this, parentUI); SplitSpeciesBatchUIHandler handler = new SplitSpeciesBatchUIHandler(parentUI, this); setContextValue(handler); @@ -72,89 +73,75 @@ <field name='sampleWeight' component='sampleWeightField'/> </BeanValidator> - <JSplitPane id='splitPane' constraints='BorderLayout.CENTER'> + <Table id='configurationPanel' fill='both' + constraints='BorderLayout.NORTH'> - <JPanel layout='{new BorderLayout()}'> +  + <row> + <cell anchor='west'> + <JLabel id='categoryLabel'/> + </cell> + <cell weightx='1.0'> + <BeanComboBox id='categoryComboBox' constructorParams='this' + genericType='SampleCategoryType'/> + </cell> + </row> - <Table id='configurationPanel' fill='both' - constraints='BorderLayout.NORTH'> +  + <row> + <cell columns='2'> + <JCheckBox id='sampleCheckBox' + onItemStateChanged='handler.setBoolean(event, "sample")'/> + </cell> + </row> -  - <row> - <cell anchor='west'> - <JLabel id='categoryLabel'/> - </cell> - <cell weightx='1.0'> - <BeanComboBox id='categoryComboBox' constructorParams='this' - genericType='SampleCategoryType'/> - </cell> - </row> + <row> + <cell columns="2"> + <JSeparator/> + </cell> + </row> -  - <row> - <cell columns='2'> - <JCheckBox id='sampleCheckBox' - onItemStateChanged='handler.setBoolean(event, "sample")'/> - </cell> - </row> +  + <row> + <cell anchor='west'> + <JLabel id='speciesLabel'/> + </cell> + <cell weightx='1.0'> + <JTextField id='speciesField'/> + </cell> + </row> - <row> - <cell columns="2"> - <JSeparator/> - </cell> - </row> +  + <row> + <cell anchor='west'> + <JLabel id='batchWeightLabel'/> + </cell> + <cell weightx='1.0'> + <JTextField id='batchWeightField'/> + </cell> + </row> -  - <row> - <cell anchor='west'> - <JLabel id='speciesLabel'/> - </cell> - <cell weightx='1.0'> - <JTextField id='speciesField'/> - </cell> - </row> +  + <row> + <cell anchor='west'> + <JLabel id='sampleWeightLabel'/> + </cell> + <cell weightx='1.0'> + <JTextField id='sampleWeightField'/> + </cell> + </row> -  - <row> - <cell anchor='west'> - <JLabel id='batchWeightLabel'/> - </cell> - <cell weightx='1.0'> - <JTextField id='batchWeightField'/> - </cell> - </row> + </Table> -  - <row> - <cell anchor='west'> - <JLabel id='sampleWeightLabel'/> - </cell> - <cell weightx='1.0'> - <JTextField id='sampleWeightField'/> - </cell> - </row> + <JScrollPane id='tableScrollPane' constraints='BorderLayout.CENTER'> + <JXTable id='table'/> + </JScrollPane> - </Table> - - <JScrollPane id='tableScrollPane' constraints='BorderLayout.CENTER'> - <JXTable id='table'/> - </JScrollPane> - -  - <JPanel id='actionPanel' layout='{new GridLayout(1, 0)}' - constraints='BorderLayout.SOUTH'> - <JButton id='cancelButton' onActionPerformed='handler.cancel()'/> - <JButton id='saveButton' onActionPerformed='handler.save()'/> - </JPanel> - +  + <JPanel id='actionPanel' layout='{new GridLayout(1, 0)}' + constraints='BorderLayout.SOUTH'> + <JButton id='cancelButton' onActionPerformed='handler.cancel()'/> + <JButton id='saveButton' onActionPerformed='handler.save()'/> </JPanel> -  - <JPanel id='messagePanel' layout='{new GridLayout()}'> - <JScrollPane columnHeaderView='{errorTable.getTableHeader()}'> - <JTable id='errorTable'/> - </JScrollPane> - </JPanel> - </JSplitPane> - </JPanel> Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/split/SplitSpeciesBatchUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -30,6 +30,8 @@ import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; import fr.ifremer.tutti.persistence.entities.referential.Species; import fr.ifremer.tutti.ui.swing.TuttiUI; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUI; +import fr.ifremer.tutti.ui.swing.content.operation.catches.EditCatchesUIHandler; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SampleCategory; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SampleCategoryType; import fr.ifremer.tutti.ui.swing.content.operation.catches.species.SpeciesBatchRowModel; @@ -47,6 +49,9 @@ import java.beans.PropertyChangeEvent; import java.beans.PropertyChangeListener; import java.util.List; +import jaxx.runtime.SwingUtil; +import jaxx.runtime.swing.CardLayout2Ext; +import jaxx.runtime.validator.swing.SwingValidator; /** * Handler of {@link SplitSpeciesBatchUI}. @@ -75,12 +80,12 @@ */ private final SplitSpeciesBatchUI ui; - public SplitSpeciesBatchUIHandler(SpeciesBatchUI parentUi, + public SplitSpeciesBatchUIHandler(EditCatchesUI parentUi, SplitSpeciesBatchUI ui) { super(parentUi.getHandler().getContext(), SplitSpeciesBatchRowModel.PROPERTY_CATEGORY_VALUE, SplitSpeciesBatchRowModel.PROPERTY_WEIGHT); - this.parentUi = parentUi; + this.parentUi = parentUi.getSpeciesTabContent(); this.ui = ui; } @@ -145,6 +150,11 @@ } @Override + public SwingValidator<SplitSpeciesBatchUIModel> getValidator() { + return ui.getValidator(); + } + + @Override public void beforeInitUI() { SplitSpeciesBatchUIModel model = new SplitSpeciesBatchUIModel(); @@ -200,9 +210,6 @@ initTable(getTable()); - SwingValidatorUtil.installUI(ui.getErrorTable(), - new SwingValidatorMessageTableRenderer()); - listenValidatorValid(ui.getValidator(), model); } @@ -211,6 +218,15 @@ if (log.isInfoEnabled()) { log.info("closing: " + ui); } + + // evict model from validator + ui.getValidator().setBean(null); + + // when canceling always invalid model + getModel().setValid(false); + + EditCatchesUI parent = SwingUtil.getParentContainer(ui, EditCatchesUI.class); + parent.getHandler().setSelectedCard(EditCatchesUIHandler.MAIN_CARD); } //------------------------------------------------------------------------// @@ -223,15 +239,7 @@ if (log.isInfoEnabled()) { log.info("Cancel UI " + ui); } - - // evict model from validator - ui.getValidator().setBean(null); - - // when canceling always invalid model - getModel().setValid(false); - - // close dialog - closeDialog(ui); + closeUI(ui); } //------------------------------------------------------------------------// @@ -299,7 +307,11 @@ log.info("Save UI " + ui); } - closeDialog(ui); + EditCatchesUI parent = SwingUtil.getParentContainer(ui, EditCatchesUI.class); + parent.getSpeciesTabContent().getHandler().splitBatch(getModel()); + + // close dialog + closeUI(ui); } //------------------------------------------------------------------------// Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/CaracteristicTabUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/CaracteristicTabUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/CaracteristicTabUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -40,6 +40,7 @@ import fr.ifremer.tutti.ui.swing.util.table.AbstractTuttiTableUIHandler; import java.util.List; import jaxx.runtime.swing.editor.bean.BeanComboBox; +import jaxx.runtime.validator.swing.SwingValidator; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; @@ -106,6 +107,11 @@ public M getModel() { return (M) getUI().getModel(); } + + @Override + public SwingValidator<M> getValidator() { + return null; + } @Override protected void onAfterSelectedRowChanged(int oldRowIndex, Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/gearshooting/GearShootingTabUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/gearshooting/GearShootingTabUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/gearshooting/GearShootingTabUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -37,6 +37,7 @@ import fr.ifremer.tutti.ui.swing.util.editor.CaracteristicValueRenderer; import java.util.List; import jaxx.runtime.swing.editor.bean.BeanComboBox; +import jaxx.runtime.validator.swing.SwingValidator; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.jdesktop.swingx.JXTable; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/hydrology/HydrologyTabUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/hydrology/HydrologyTabUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/fishing/hydrology/HydrologyTabUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -36,6 +36,7 @@ import fr.ifremer.tutti.ui.swing.util.editor.CaracteristicValueEditor; import fr.ifremer.tutti.ui.swing.util.editor.CaracteristicValueRenderer; import jaxx.runtime.swing.editor.bean.BeanComboBox; +import jaxx.runtime.validator.swing.SwingValidator; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.jdesktop.swingx.JXTable; @@ -207,7 +208,7 @@ table.setColumnModel(columnModel); initTable(table); } - + //------------------------------------------------------------------------// //-- Public methods --// //------------------------------------------------------------------------// Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/program/EditProgramUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/program/EditProgramUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/program/EditProgramUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -125,4 +125,9 @@ return ui.getModel(); } + @Override + public SwingValidator<EditProgramUIModel> getValidator() { + return ui.getValidator(); + } + } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolSpeciesTableModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolSpeciesTableModel.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolSpeciesTableModel.java 2013-01-31 08:47:56 UTC (rev 276) @@ -101,7 +101,6 @@ result.setWeightEnabled(true); result.setCountIfNoFrequencyEnabled(true); result.setCalcifySampleEnabled(true); - result.setValid(false); return result; } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/protocol/EditProtocolUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -140,6 +140,11 @@ } @Override + public SwingValidator<EditProtocolUIModel> getValidator() { + return ui.getValidator(); + } + + @Override public void beforeInitUI() { EditProtocolUIModel model = new EditProtocolUIModel(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/AbstractTuttiTabContainerUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/AbstractTuttiTabContainerUIHandler.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/AbstractTuttiTabContainerUIHandler.java 2013-01-31 08:47:56 UTC (rev 276) @@ -31,6 +31,7 @@ import fr.ifremer.tutti.ui.swing.TuttiUIContext; import java.awt.Component; import javax.swing.DefaultSingleSelectionModel; +import javax.swing.Icon; import javax.swing.JTabbedPane; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/CustomTab.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/CustomTab.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/CustomTab.java 2013-01-31 08:47:56 UTC (rev 276) @@ -32,6 +32,7 @@ import java.beans.PropertyChangeListener; import javax.swing.JLabel; import javax.swing.JPanel; +import jaxx.runtime.SwingUtil; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; @@ -58,8 +59,6 @@ public CustomTab(AbstractTuttiBeanUIModel model) { this.model = model; - title.setText(_(model.getTitle())); - setBackground(null); this.model.addPropertyChangeListener(AbstractTuttiBeanUIModel.PROPERTY_MODIFY, new PropertyChangeListener() { public void propertyChange(PropertyChangeEvent evt) { @@ -71,6 +70,14 @@ CustomTab.this.title.setText(title); } }); + + setBackground(null); + + title.setText(_(model.getTitle())); + String actionIcon = model.getIcon(); + if (actionIcon != null) { + title.setIcon(SwingUtil.createActionIcon(actionIcon)); + } add(title); } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/SwingValidatorMessageWidget.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/SwingValidatorMessageWidget.java 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/SwingValidatorMessageWidget.java 2013-01-31 08:47:56 UTC (rev 276) @@ -45,6 +45,8 @@ import javax.swing.JToggleButton; import javax.swing.KeyStroke; import javax.swing.ListSelectionModel; +import javax.swing.event.TableModelEvent; +import javax.swing.event.TableModelListener; import jaxx.runtime.SwingUtil; import jaxx.runtime.validator.swing.SwingValidator; import jaxx.runtime.validator.swing.SwingValidatorMessageTableModel; @@ -55,6 +57,7 @@ import org.jdesktop.swingx.JXTitledPanel; import static org.nuiton.i18n.I18n._; +import org.nuiton.validator.NuitonValidatorScope; /** * Button which opens a popup containing a table with the errors found @@ -76,8 +79,58 @@ protected Point popupPosition = null; public SwingValidatorMessageWidget() { - super(SwingUtil.createActionIcon("table-error")); + super(SwingUtil.createActionIcon("alert-none")); + setToolTipText(_("tutti.validator.alert.none")); + errorTableModel.addTableModelListener(new TableModelListener() { + + public void tableChanged(TableModelEvent e) { + int alerts = errorTableModel.getRowCount(); + String label; + switch (alerts) { + case 0: + label = "tutti.validator.alert.none"; + break; + case 1: + label = "tutti.validator.alert.one"; + break; + default: + label = "tutti.validator.alert.several"; + } + + NuitonValidatorScope maxScope; + String icon; + if (alerts == 0) { + maxScope = null; + icon = "alert-none"; + + } else { + maxScope = NuitonValidatorScope.INFO; + for (int i = 0 ; i < alerts ; i++) { + NuitonValidatorScope scope = errorTableModel.getRow(i).getScope(); + int diff = scope.compareTo(maxScope); + if (diff < 0) { + maxScope = scope; + } + } + switch (maxScope) { + case INFO: + icon = "alert-info"; + break; + case WARNING: + icon = "alert-warning"; + break; + default: + icon = "alert-error"; + + } + } + + setToolTipText(_(label, alerts)); + setIcon(SwingUtil.createActionIcon(icon)); + } + }); + errorTable.setModel(errorTableModel); errorTable.setRowSelectionAllowed(true); errorTable.setAutoCreateRowSorter(true); @@ -105,18 +158,6 @@ cm.setDragInsets(cr.getDragInsets()); cm.registerComponent(popup); - addActionListener(new ActionListener() { - - @Override - public void actionPerformed(ActionEvent e) { - if(isSelected()) { - popup.setVisible(true); - } else { - popup.dispose(); - } - } - }); - popup.addWindowListener(new WindowAdapter() { @Override @@ -138,6 +179,18 @@ }); + addActionListener(new ActionListener() { + + @Override + public void actionPerformed(ActionEvent e) { + if(isSelected()) { + popup.setVisible(true); + } else { + popup.dispose(); + } + } + }); + addHierarchyBoundsListener(new HierarchyBoundsAdapter() { @Override @@ -184,5 +237,5 @@ errorTableModel.clearValidators(); errorTableModel.clear(); } - + } Modified: trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties =================================================================== --- trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties 2013-01-31 08:45:23 UTC (rev 275) +++ trunk/tutti-ui-swing/src/main/resources/i18n/tutti-ui-swing_fr_FR.properties 2013-01-31 08:47:56 UTC (rev 276) @@ -123,12 +123,14 @@ tutti.label.catches.macroWasteTotalWeight=Poids TOTAL (kg) tutti.label.catches.planktonTotalSampleWeight=Poids total échantillonné tutti.label.catches.planktonTotalWeight=Poids total +tutti.label.catches.speciesTotalInertWeight=Poids inerte (kg) +tutti.label.catches.speciesTotalLivingNotItemizedWeight=Poids vivant non détaillé (kg) tutti.label.catches.speciesTotalSampleSortedWeight=Poids VRAC trié (kg) tutti.label.catches.speciesTotalSortedWeight=Poids total VRAC (kg) tutti.label.catches.speciesTotalUnsortedWeight=Poids total HORS VRAC (kg) tutti.label.catches.speciesTotalWeight=Poids TOTAL (kg) tutti.label.comment=Commentaire -tutti.label.createSpeciesBatch.batchWeight=Poids du lot +tutti.label.createSpeciesBatch.batchWeight=Poids du lot (kg) tutti.label.createSpeciesBatch.sortedUnsortedCategory=V / HV tutti.label.createSpeciesBatch.species=Espèce du lot tutti.label.cruise=Campagne @@ -303,16 +305,16 @@ tutti.table.species.batch.header.number=Nombre tutti.table.species.batch.header.sexCategory=Sexe tutti.table.species.batch.header.sizeCategory=Class. Tri -tutti.table.species.batch.header.sortedUnsortedCategory=V/HV +tutti.table.species.batch.header.sortedUnsortedCategory=V/HV (kg) tutti.table.species.batch.header.species=Espèce tutti.table.species.batch.header.toConfirm=A Confirmer -tutti.table.species.batch.header.weight=Poids sous-échantillonné -tutti.table.species.frequency.header.computedWeight=Poids calculé +tutti.table.species.batch.header.weight=Poids sous-échantillonné (kg) +tutti.table.species.frequency.header.computedWeight=Poids calculé (kg) tutti.table.species.frequency.header.lengthStep=Classe de taille tutti.table.species.frequency.header.number=Nombre -tutti.table.species.frequency.header.weight=Poids observé +tutti.table.species.frequency.header.weight=Poids observé (kg) tutti.table.species.sampleCategory.header.category=Catégorie -tutti.table.species.sampleCategory.header.weight=Poids +tutti.table.species.sampleCategory.header.weight=Poids (kg) tutti.timeeditor.H=H tutti.title.about=À propos de Tutti tutti.title.choose.protocolExportFile=Choisir le fichier où exporter le protocole @@ -333,7 +335,7 @@ tutti.title.noSelectedProtocol=Pas de protocol sélectionné tutti.title.selectedCruise=Campagne %s tutti.title.selectedProgram=Série de campagne %s -tutti.title.selectedProtocol=Protocol %s +tutti.title.selectedProtocol=Protocole %s tutti.title.splitBatch=Catégoriser un lot tutti.title.validate.operations=Validation des opérations de pêches (%s) tutti.to.be.done=< A FAIRE > @@ -342,10 +344,13 @@ tutti.update.application.url.description= tutti.update.database.url.description= tutti.update.location.description= +tutti.validator.alert.none=Aucune alerte +tutti.validator.alert.one=1 alerte +tutti.validator.alert.several=%s alertes tutti.validator.error.comment.too.long=Taille de commentaire trop longue (limitée à %s caractères) tutti.validator.error.createSpeciesBatch.batchWeight.invalidValue=Le poids du lot doit être strictement positif tutti.validator.error.createSpeciesBatch.batchWeight.required=Le poids du lot est obligatoire -tutti.validator.error.createSpeciesBatch.sortedUnsortedCategory.required=LA catégorie Vrac / Hors Vrac est obligatoire +tutti.validator.error.createSpeciesBatch.sortedUnsortedCategory.required=La catégorie Vrac / Hors Vrac est obligatoire tutti.validator.error.createSpeciesBatch.species.required=L'espèce est obligatoire tutti.validator.error.createSpeciesBatch.speciesAndCategory.notAvailable=Couple (espèce - Vrac/Hors Vrac) déjà utilisée tutti.validator.error.cruise.beginDate.required=La date de début est obligatoire Added: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-error.png =================================================================== (Binary files differ) Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-error.png ___________________________________________________________________ Added: svn:mime-type + application/octet-stream Added: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-info.png =================================================================== (Binary files differ) Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-info.png ___________________________________________________________________ Added: svn:mime-type + application/octet-stream Added: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-none.png =================================================================== (Binary files differ) Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-none.png ___________________________________________________________________ Added: svn:mime-type + application/octet-stream Added: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-warning.png =================================================================== (Binary files differ) Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-alert-warning.png ___________________________________________________________________ Added: svn:mime-type + application/octet-stream Added: trunk/tutti-ui-swing/src/main/resources/icons/action-protocol.png =================================================================== (Binary files differ) Property changes on: trunk/tutti-ui-swing/src/main/resources/icons/action-protocol.png ___________________________________________________________________ Added: svn:mime-type + application/octet-stream

1 0

r275 - trunk/tutti-persistence/src/main/xmi
by kmorin＠users.forge.codelutin.com 31 Jan '13

31 Jan '13

Author: kmorin Date: 2013-01-31 09:45:23 +0100 (Thu, 31 Jan 2013) New Revision: 275 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/275 Log: add properties to catchbatch Modified: trunk/tutti-persistence/src/main/xmi/tutti-persistence.zargo Modified: trunk/tutti-persistence/src/main/xmi/tutti-persistence.zargo =================================================================== (Binary files differ)

1 0

r274 - in trunk/tutti-persistence-adagio/src: main/java/fr/ifremer/tutti/persistence/service main/java/fr/ifremer/tutti/persistence/service/measure main/resources test/java/fr/ifremer/tutti/persistence/service
by blavenier＠users.forge.codelutin.com 31 Jan '13

31 Jan '13

Author: blavenier Date: 2013-01-31 01:04:37 +0100 (Thu, 31 Jan 2013) New Revision: 274 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/274 Log: ref refs #1920: [Persistence] Adagio Donnees thematiques - Add persistence for CatchBatch - Add a helper for persistence on *Measurement entities - Fix ReferentialPersistenceService.getSortedUnsortedCaracteristic() to ignore "rejected" qualitative value - Add some enumeration Added: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml Removed: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementService.java Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImplTest.java trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2013-01-31 00:04:37 UTC (rev 274) @@ -24,11 +24,44 @@ * #L% */ -import fr.ifremer.tutti.persistence.entities.data.CatchBatch; +import java.util.ArrayList; +import java.util.HashMap; +import java.util.HashSet; +import java.util.Iterator; +import java.util.List; +import java.util.Map; +import java.util.Set; + +import javax.annotation.Resource; + import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; +import org.hibernate.FlushMode; +import org.hibernate.type.IntegerType; +import org.springframework.dao.DataIntegrityViolationException; +import org.springframework.dao.DataRetrievalFailureException; import org.springframework.stereotype.Service; +import com.google.common.base.Preconditions; +import com.google.common.collect.Lists; + +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatchDao; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatchImpl; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatchDao; +import fr.ifremer.adagio.core.dao.data.batch.denormalized.DenormalizedBatchDao; +import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.data.operation.FishingOperationImpl; +import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxon; +import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; +import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; +import fr.ifremer.tutti.persistence.entities.data.CatchBatch; +import fr.ifremer.tutti.persistence.entities.data.FishingOperation; +import fr.ifremer.tutti.persistence.service.measure.MeasurementPersistenceHelper; + /** * @author tchemit <chemit(a)codelutin.com> * @since 1.0 @@ -40,18 +73,386 @@ private static final Log log = LogFactory.getLog(CatchBatchPersistenceServiceImpl.class); + @Resource(name = "referentialPersistenceService") + protected ReferentialPersistenceService referentialService; + + @Resource(name = "denormalizedBatchDao") + protected DenormalizedBatchDao denormalizedBatchDao; + + @Resource(name = "sortingBatchDao") + protected SortingBatchDao sortingBatchDao; + + @Resource(name = "catchBatchDao") + protected CatchBatchDao catchBatchDao; + + @Resource(name = "measurementPersistenceHelper") + protected MeasurementPersistenceHelper measurementHelper; + + @Override public CatchBatch getCatchBatchFromFishingOperation(String id) { - return null; + Preconditions.checkNotNull(id); + + Iterator<Object[]> list = queryList("catchBatch", + "fishingOperationId", IntegerType.INSTANCE, Integer.valueOf(id), + "pmfmIdSorted", IntegerType.INSTANCE, enumeration.PMFM_ID_SORTED_UNSORTED, + "pmfmIdSortingType", IntegerType.INSTANCE, enumeration.PMFM_ID_SORTING_TYPE); + + int rowCount = 0; + CatchBatch result = new CatchBatch(); + Integer previousSortedBatchId = null; + while (list.hasNext()) { + Object[] source = list.next(); + rowCount++; + + if (rowCount == 1) { + // Id + result.setId(source[0].toString()); + + // Total weight + Float totalWeight = (Float)source[1]; + result.setCatchTotalWeight(totalWeight); + } + + Integer sortedBatchId = (Integer)source[2]; + Integer sortedQualitativeValueId = (Integer)source[5]; + if (sortedBatchId != null && !sortedBatchId.equals(previousSortedBatchId)) { + // TODO BL : retrieve QV + String samplingRatioText = (String)source[3]; + Float weight = (Float)source[4]; + if (weight != null && enumeration.QUALITATIVE_VRAC_ID.equals(sortedQualitativeValueId)) { + result.setCatchTotalSortedCarousselWeight(weight); + result.setCatchTotalSortedTremisWeight(getTotalWeight(weight, samplingRatioText)); + } + else if (weight != null && enumeration.QUALITATIVE_HORS_VRAC_ID.equals(sortedQualitativeValueId)) { + result.setCatchTotalUnsortedWeight(weight); + if (samplingRatioText != null && !samplingRatioText.isEmpty()) { + // TODO BL : throw error because baths are not compatible with tutti ?? + } + } + else if (weight != null && enumeration.QUALITATIVE_UNSORTED_ID.equals(sortedQualitativeValueId)) { + result.setCatchTotalRejectedWeight(weight); + if (samplingRatioText != null && !samplingRatioText.isEmpty()) { + // TODO BL : throw error because baths are not compatible with tutti ?? + } + } + } + + Integer sortingTypeBatchId = (Integer)source[6]; + { + String samplingRatioText = (String)source[7]; + Float weight = (Float)source[8]; + Integer qualitativeValueId = (Integer)source[9]; + if (weight != null) { + if (enumeration.QUALITATIVE_VRAC_ID.equals(sortedQualitativeValueId) + && enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES.equals(qualitativeValueId)) { + result.setSpeciesTotalSampleSortedWeight(weight); + result.setSpeciesTotalSortedWeight(getTotalWeight(weight, samplingRatioText)); + } + else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(sortedQualitativeValueId) + && enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES.equals(qualitativeValueId)) { + result.setSpeciesTotalUnsortedWeight(weight); + // TODO error si samplingRatio not null + } + // TOBO BL : add benthos, plancton, etc. + } + } + + + previousSortedBatchId = sortedBatchId; + } + + return result; } @Override public CatchBatch createCatchBatch(CatchBatch bean) { - return null; + Preconditions.checkNotNull(bean); + Preconditions.checkArgument(bean.getId() == null); + Preconditions.checkNotNull(bean.getFishingOperation()); + Preconditions.checkNotNull(bean.getFishingOperation().getId()); + + fr.ifremer.adagio.core.dao.data.batch.CatchBatch catchBatch = fr.ifremer.adagio.core.dao.data.batch.CatchBatch.Factory.newInstance(); + beanToEntity(bean, catchBatch, true); + catchBatch = catchBatchDao.create(catchBatch); + bean.setId(String.valueOf(catchBatch.getId())); + + // Link to fishing operation + getCurrentSession().flush(); + Integer fishingOperationId = Integer.valueOf(bean.getFishingOperation().getId()); + int rowUpdated = queryUpdate("updateFishingOperationCatchBatch", + "fishingOperationId", IntegerType.INSTANCE, fishingOperationId, + "catchBatchId", IntegerType.INSTANCE, catchBatch.getId()); + if (rowUpdated == 0) { + throw new DataIntegrityViolationException("Could not attach catch batch to the given operation : operation was not found."); + } + + return bean; } @Override public CatchBatch saveCatchBatch(CatchBatch bean) { - return null; + + Preconditions.checkNotNull(bean); + Preconditions.checkNotNull(bean.getId()); + + getCurrentSession().enableFetchProfile("batch-with-childs"); + getCurrentSession().setFlushMode(FlushMode.COMMIT); + fr.ifremer.adagio.core.dao.data.batch.CatchBatch catchBatch = catchBatchDao.load(Integer.valueOf(bean.getId())); + if (catchBatch == null) { + throw new DataRetrievalFailureException("Could not retrieve catch batch with id=" + bean.getId()); + } + + beanToEntity(bean, catchBatch, true); + catchBatchDao.update(catchBatch); + getCurrentSession().flush(); + return bean; } + + // ------------------------------------------------------------------------// + // -- Internal methods --// + // ------------------------------------------------------------------------// + protected void beanToEntity(CatchBatch source, + fr.ifremer.adagio.core.dao.data.batch.CatchBatch target, + boolean copyIfNull) { + Preconditions.checkNotNull(source.getFishingOperation()); + Preconditions.checkNotNull(source.getFishingOperation().getId()); + + // Retrieve recorder department + // TODO BLA : prendre le service du 1er saisisseur sur l'OP ? + Integer recorderDepartmentId = enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; + + // First initialization (when created) + Integer fishingOperationId = Integer.valueOf(source.getFishingOperation().getId()); + target.setFishingOperation(load(FishingOperationImpl.class, fishingOperationId)); + + target.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + target.setRankOrder((short)1); + target.setSynchronizationStatus(SynchronizationStatus.DIRTY.getValue()); + + // Create lists to store all updates, then remove not updated items + Set<QuantificationMeasurement> notChangedQuantificationMeasurements = new HashSet<QuantificationMeasurement>(); + if (target.getQuantificationMeasurements() != null) { + notChangedQuantificationMeasurements.addAll(target.getQuantificationMeasurements()); + } + + // Total Weight + if (copyIfNull && source.getCatchTotalWeight() == null) { + // Nothing to do : will be removed later, using notChangedQuantificationMeasurements + } + else if (source.getCatchTotalWeight() != null){ + QuantificationMeasurement quantificationMeasurement = measurementHelper.setQuantificationMeasurement(target, enumeration.PMFM_ID_WEIGHT_MEASURED, recorderDepartmentId, source.getCatchTotalWeight(), true); + notChangedQuantificationMeasurements.remove(quantificationMeasurement); + } + + // Removed not changed measurements (in sorting and quantification measurement lists) + if (target.getQuantificationMeasurements() != null && notChangedQuantificationMeasurements.size() > 0) { + for (QuantificationMeasurement qm : notChangedQuantificationMeasurements) { + target.getQuantificationMeasurements().remove(qm); + } + } + Map<Integer, SortingBatch> catchBatchChilds = getChildsMap(target, enumeration.PMFM_ID_SORTED_UNSORTED); + + // ----------------------------------------------------------------------------- + // Sorted Vrac + // ----------------------------------------------------------------------------- + { + SortingBatch batch = catchBatchChilds.get(enumeration.QUALITATIVE_VRAC_ID); + if (batch == null) { + batch = SortingBatch.Factory.newInstance(); + target.getChildBatchs().add(batch); + } + beanToEntitySortingBatch(target, target, batch, recorderDepartmentId, + enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, + source.getCatchTotalSortedTremisWeight(), source.getCatchTotalSortedCarousselWeight(), + copyIfNull); + batch.setRankOrder((short)1); + + // Manage childs : + { + Map<Integer, SortingBatch> batchChilds = getChildsMap(batch, enumeration.PMFM_ID_SORTING_TYPE); + + // Species : + SortingBatch speciesBatch = batchChilds.get(enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); + if (speciesBatch == null) { + speciesBatch = SortingBatch.Factory.newInstance(); + if (batch.getChildBatchs() == null) { + batch.setChildBatchs(Lists.newArrayList((Batch)speciesBatch)); + } + else{ + batch.getChildBatchs().add(speciesBatch); + } + } + beanToEntitySortingBatch(target, batch, speciesBatch, recorderDepartmentId, + enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, + source.getSpeciesTotalSortedWeight(), source.getSpeciesTotalSampleSortedWeight(), + copyIfNull); + speciesBatch.setRankOrder((short)1); + } + // TODO BL : benthos, plancton, macro déchet... + } + + // ----------------------------------------------------------------------------- + // Sorted Hors Vrac + // ----------------------------------------------------------------------------- + { + SortingBatch batch = catchBatchChilds.get(enumeration.QUALITATIVE_HORS_VRAC_ID); + if (batch == null) { + batch = SortingBatch.Factory.newInstance(); + target.getChildBatchs().add(batch); + } + beanToEntitySortingBatch(target, target, batch, recorderDepartmentId, + enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, + source.getCatchTotalUnsortedWeight(), null, + copyIfNull); + batch.setRankOrder((short)2); + + // Manage childs : + { + Map<Integer, SortingBatch> batchChilds = getChildsMap(batch, enumeration.PMFM_ID_SORTING_TYPE); + + // Species : + SortingBatch speciesBatch = batchChilds.get(enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); + if (speciesBatch == null) { + speciesBatch = SortingBatch.Factory.newInstance(); + if (batch.getChildBatchs() == null) { + batch.setChildBatchs(Lists.newArrayList((Batch)speciesBatch)); + } + else{ + batch.getChildBatchs().add(speciesBatch); + } + } + beanToEntitySortingBatch(target, batch, speciesBatch, recorderDepartmentId, + enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, + source.getSpeciesTotalUnsortedWeight(), null, + copyIfNull); + speciesBatch.setRankOrder((short)1); + } + + // TODO BL : benthos, plancton, macro déchet... + } + + // ----------------------------------------------------------------------------- + // Unsorted (=rejected) + // ----------------------------------------------------------------------------- + // Unsorted : + SortingBatch unsortedBatch = catchBatchChilds.get(enumeration.QUALITATIVE_UNSORTED_ID); + if (unsortedBatch == null) { + unsortedBatch = SortingBatch.Factory.newInstance(); + target.getChildBatchs().add(unsortedBatch); + } + beanToEntitySortingBatch(target, target, unsortedBatch, recorderDepartmentId, + enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_UNSORTED_ID, + source.getCatchTotalRejectedWeight(), null, + copyIfNull); + unsortedBatch.setRankOrder((short)3); + + + + } + + protected Map<Integer, SortingBatch> getChildsMap(Batch parentBatch, Integer pmfmId) { + Map<Integer, SortingBatch> batchByQualitativeValueId = new HashMap<Integer, SortingBatch>(); + if (parentBatch.getChildBatchs() == null) { + return batchByQualitativeValueId; + } + for (Iterator iterator = parentBatch.getChildBatchs() + .iterator(); iterator.hasNext();) { + Batch childBatch = (Batch) iterator.next(); + SortingMeasurement sm = measurementHelper.getSortingMeasurement((SortingBatch)childBatch, pmfmId, null, false); + if (sm != null && sm.getQualitativeValue() != null && sm.getQualitativeValue().getId() != null){ + batchByQualitativeValueId.put(sm.getQualitativeValue().getId(), (SortingBatch)childBatch); + } + } + return batchByQualitativeValueId; + } + + protected void beanToEntitySortingBatch( + fr.ifremer.adagio.core.dao.data.batch.CatchBatch rootBatch, + fr.ifremer.adagio.core.dao.data.batch.Batch parentBatch, + fr.ifremer.adagio.core.dao.data.batch.SortingBatch target, + Integer recorderDepartmentId, + Integer sortingPmfmId, + Integer sortingQualitativeValueId, + Float weight, + Float sampleWeight, + boolean copyIfNull) { + + // Create lists to store all updates, then remove not updated items + Set<QuantificationMeasurement> notChangedQuantificationMeasurements = new HashSet<QuantificationMeasurement>(); + if (target.getQuantificationMeasurements() != null) { + notChangedQuantificationMeasurements.addAll(target.getQuantificationMeasurements()); + } + Set<SortingMeasurement> notChangedSortingMeasurements = new HashSet<SortingMeasurement>(); + if (target.getSortingMeasurements() != null) { + notChangedSortingMeasurements.addAll(target.getSortingMeasurements()); + } + + // Some mandatory properties : + target.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + target.setRootBatch(rootBatch); + target.setParentBatch(parentBatch); + + // Sorting measurement + if (copyIfNull && (sortingPmfmId == null || sortingQualitativeValueId == null)) { + // Nothing to do : will be removed later, using notChangedSortingMeasurements + } + else if (sortingPmfmId != null && sortingQualitativeValueId != null){ + SortingMeasurement sm = measurementHelper.setSortingMeasurement(target, recorderDepartmentId, sortingPmfmId, sortingQualitativeValueId); + notChangedSortingMeasurements.remove(sm); + } + + // Sampling Ratio + if (copyIfNull && (sampleWeight == null || weight == null)) { + target.setSamplingRatio(null); + target.setSamplingRatioText(null); + } + else if (sampleWeight != null && weight != null) { + String samplingRatioText = sampleWeight + "/" + weight; + samplingRatioText = samplingRatioText.replaceAll(",", "."); + target.setSamplingRatioText(samplingRatioText); + target.setSamplingRatio(sampleWeight.floatValue() / weight.floatValue()); + } + + // Weight + if (copyIfNull && (sampleWeight == null && weight == null)) { + // Nothing to do : will be removed later, using notChangedQuantificationMeasurements + } + else if (sampleWeight != null || weight != null) { + Float batchReferenceWeight = sampleWeight; + if (batchReferenceWeight == null) { + batchReferenceWeight = weight; + } + QuantificationMeasurement quantificationMeasurement = measurementHelper.setQuantificationMeasurement(target, enumeration.PMFM_ID_WEIGHT_MEASURED, recorderDepartmentId, batchReferenceWeight, true); + notChangedQuantificationMeasurements.remove(quantificationMeasurement); + } + + // Removed not changed measurements (in sorting and quantification measurement lists) + if (target.getQuantificationMeasurements() != null && notChangedQuantificationMeasurements.size() > 0) { + for (QuantificationMeasurement qm : notChangedQuantificationMeasurements) { + target.getQuantificationMeasurements().remove(qm); + } + } + if (target.getSortingMeasurements() != null && notChangedSortingMeasurements.size() > 0) { + for (SortingMeasurement sm : notChangedSortingMeasurements) { + target.getSortingMeasurements().remove(sm); + } + } + } + + protected Float getTotalWeight(Float weight, String samplingRatioText) { + if (weight == null) { + return null; + } + String startStr = weight.toString().replace(',', '.') + "/"; + if (samplingRatioText != null && samplingRatioText.startsWith(startStr)) { + String weightStr = samplingRatioText.substring(startStr.length()); + if (weightStr != null && !weightStr.isEmpty()) { + return Float.parseFloat(weightStr); + } + } + // TODO BL : attention au saise "1/2" qui ne seront pas pris (mais "1.0/2.0" oui) + return null; + } + } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2013-01-31 00:04:37 UTC (rev 274) @@ -72,13 +72,14 @@ import fr.ifremer.tutti.persistence.entities.referential.Gear; import fr.ifremer.tutti.persistence.entities.referential.Person; import fr.ifremer.tutti.persistence.entities.referential.Vessel; +import fr.ifremer.tutti.persistence.service.measure.MeasurementPersistenceHelper; /** * @author tchemit <chemit(a)codelutin.com> * @since 0.3 */ @Service("cruisePersistenceService") -public class CruisePersistenceServiceImpl extends AbstractPersistenceService implements CruisePersistenceService, MeasurementService { +public class CruisePersistenceServiceImpl extends AbstractPersistenceService implements CruisePersistenceService { /** Logger. */ private static final Log log = @@ -119,6 +120,9 @@ @Resource(name = "gearDao") protected GearDao gearDao; + + @Resource(name = "measurementPersistenceHelper") + protected MeasurementPersistenceHelper measurementHelper; protected Calendar calendar = new GregorianCalendar(); @@ -488,7 +492,7 @@ } else if (!source.isGearEmpty()) { for (int i = 0; i < source.getGear().size(); i++) { Gear gear = source.getGear().get(i); - GearPhysicalFeatures guf = getGearPhysicalfeatures(fishingTrip, Integer.valueOf(gear.getId()), true); + GearPhysicalFeatures guf = measurementHelper.getGearPhysicalfeatures(fishingTrip, Integer.valueOf(gear.getId()), true); guf.setStartDate(fishingTrip.getDepartureDateTime()); guf.setEndDate(fishingTrip.getReturnDateTime()); guf.setVessel(fishingTrip.getVessel()); @@ -499,10 +503,10 @@ // Trawl net (store in Gear Physical features) if (copyIfNull && source.getMultirigNumber() == null) { - removeGearPhysicalMeasurement(guf, enumeration.PMFM_ID_MULTIRIG_NUMBER); + measurementHelper.removeGearPhysicalMeasurement(guf, enumeration.PMFM_ID_MULTIRIG_NUMBER); } else { - setGearPhysicalMeasurement(target, guf, enumeration.PMFM_ID_MULTIRIG_NUMBER, Float.valueOf(source.getMultirigNumber()), null, null); + measurementHelper.setGearPhysicalMeasurement(target, guf, enumeration.PMFM_ID_MULTIRIG_NUMBER, Float.valueOf(source.getMultirigNumber()), null, null); } } } @@ -511,110 +515,6 @@ fishingTrip.setComments(miscDataBuffer.toString()); } - @Override - public GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId) { - return getGearPhysicalfeatures(fishingTrip, gearId, false); - } - - protected GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId, boolean createIfNotExists) { - // Retrieve entities : Gear Physical Features - if (fishingTrip.getGearPhysicalFeatures() != null && fishingTrip.getGearPhysicalFeatures().size() >= 0) { - for (Iterator iterator = fishingTrip.getGearPhysicalFeatures().iterator(); iterator.hasNext();) { - GearPhysicalFeatures guf = (GearPhysicalFeatures) iterator.next(); - if (gearId.equals(guf.getGear().getId())) { - return guf; - } - } - } - if (!createIfNotExists) { - return null; - } - - GearPhysicalFeatures gearPhysicalFeature = GearPhysicalFeatures.Factory.newInstance(); - gearPhysicalFeature.setFishingTrip(fishingTrip); - - fr.ifremer.adagio.core.dao.referential.gear.Gear gear = (fr.ifremer.adagio.core.dao.referential.gear.Gear)getCurrentSession().load(GearImpl.class, gearId); - gearPhysicalFeature.setGear(gear); - if (fishingTrip.getGearPhysicalFeatures() == null) { - fishingTrip.setGearPhysicalFeatures(Lists.newArrayList(gearPhysicalFeature)); - } else { - fishingTrip.getGearPhysicalFeatures().add(gearPhysicalFeature); - } - - return gearPhysicalFeature; - } - - @Override - public GearPhysicalMeasurement getGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, Integer pmfmId) { - return getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); - } - - protected GearPhysicalMeasurement getGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, - Integer pmfmId, boolean createIfNotExists) { - GearPhysicalMeasurement gearPhysicalMeasurement = null; - if (gearPhysicalFeatures.getGearPhysicalMeasurements() != null) { - for (Iterator iterator = gearPhysicalFeatures.getGearPhysicalMeasurements().iterator(); iterator.hasNext();) { - GearPhysicalMeasurement vum = (GearPhysicalMeasurement) iterator.next(); - if (pmfmId.equals(vum.getPmfm().getId())) { - gearPhysicalMeasurement = vum; - break; - } - } - } - if (gearPhysicalMeasurement == null) { - if (!createIfNotExists) { - return null; - } - gearPhysicalMeasurement = GearPhysicalMeasurement.Factory.newInstance(); - gearPhysicalMeasurement.setGearPhysicalFeatures(gearPhysicalFeatures); - if (gearPhysicalFeatures.getGearPhysicalMeasurements() == null) { - gearPhysicalFeatures.setGearPhysicalMeasurements(Lists.newArrayList(gearPhysicalMeasurement)); - } - else { - gearPhysicalFeatures.getGearPhysicalMeasurements().add(gearPhysicalMeasurement); - } - gearPhysicalMeasurement.setQualityFlag(qualityFlagDao.load(enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - gearPhysicalMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); - Pmfm pmfm = (Pmfm)getCurrentSession().load(PmfmImpl.class, pmfmId); - gearPhysicalMeasurement.setPmfm(pmfm); - //gearPhysicalMeasurement.setPmfm(pmfmDao.load(pmfmId)); - } - - return gearPhysicalMeasurement; - } - - protected void removeGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, - Integer pmfmId) { - GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); - if (gearPhysicalMeasurement == null) { - return; - } - gearPhysicalFeatures.getGearPhysicalMeasurements().remove(gearPhysicalMeasurement); - // TOBO BLa : vérifier qu'il ne faut pas dao.delete() en plus - } - - protected GearPhysicalMeasurement setGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(scientificCruise, gearPhysicalFeatures, pmfmId, true); - - if (alphanumericalValue != null) { - gearPhysicalMeasurement.setAlphanumericalValue(alphanumericalValue); - } - else if (numericalValue != null) { - gearPhysicalMeasurement.setNumericalValue(numericalValue); - } - else if (qualitativevalueId != null) { - QualitativeValue qv = (QualitativeValue)getCurrentSession().load(QualitativeValueImpl.class, qualitativevalueId); - gearPhysicalMeasurement.setQualitativeValue(qv); - //gearPhysicalMeasurement.setQualitativeValue(qualitativeValueDao.load(qualitativevalueId)); - } - - return gearPhysicalMeasurement; - } - protected List<Person> getCruisePersonsByRole(String cruiseId, Integer vesselPersonRole) { Iterator<Object[]> list = queryList( "allCruiseManagers", Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2013-01-31 00:04:37 UTC (rev 274) @@ -83,6 +83,7 @@ import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; import fr.ifremer.tutti.persistence.entities.referential.FishingOperationLocation; import fr.ifremer.tutti.persistence.entities.referential.Person; +import fr.ifremer.tutti.persistence.service.measure.MeasurementPersistenceHelper; /** * @author tchemit <chemit(a)codelutin.com> @@ -95,8 +96,9 @@ private static final Log log = LogFactory.getLog(FishingOperationPersistenceServiceImpl.class); - @Resource(name = "cruisePersistenceService") - protected MeasurementService measurementService; + + @Resource(name = "measurementPersistenceHelper") + protected MeasurementPersistenceHelper measurementHelper; @Autowired(required = true) protected ReferentialPersistenceService referentialService; @@ -551,7 +553,7 @@ // Retrieve entities : Gear Physical Features GearPhysicalFeatures gearPhysicalFeatures = target.getGearPhysicalFeatures(); if (gearPhysicalFeatures == null && source.getGear() != null && source.getGear().getId() != null) { - gearPhysicalFeatures = measurementService.getGearPhysicalfeatures(fishingTrip, Integer.valueOf(source.getGear().getId())); + gearPhysicalFeatures = measurementHelper.getGearPhysicalfeatures(fishingTrip, Integer.valueOf(source.getGear().getId())); if (gearPhysicalFeatures == null) { throw new DataIntegrityViolationException("An operation could not use a gear that is not declared in the cruise."); } @@ -590,7 +592,7 @@ // Retrieve multirig number, from Gear physical features int cruiseMultirigCount = 1; // default value - GearPhysicalMeasurement gpmMultirigCount = measurementService.getGearPhysicalMeasurement(gearPhysicalFeatures, enumeration.PMFM_ID_MULTIRIG_NUMBER); + GearPhysicalMeasurement gpmMultirigCount = measurementHelper.getGearPhysicalMeasurement(gearPhysicalFeatures, enumeration.PMFM_ID_MULTIRIG_NUMBER); if (gpmMultirigCount != null && gpmMultirigCount.getNumericalValue() != null) { cruiseMultirigCount = gpmMultirigCount.getNumericalValue().intValue(); } Deleted: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementService.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementService.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementService.java 2013-01-31 00:04:37 UTC (rev 274) @@ -1,38 +0,0 @@ -package fr.ifremer.tutti.persistence.service; - -/* - * #%L - * Tutti :: Persistence Adagio (impl) - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - - -import fr.ifremer.adagio.core.dao.data.measure.GearPhysicalMeasurement; -import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; -import fr.ifremer.adagio.core.dao.data.vessel.feature.physical.GearPhysicalFeatures; - -public interface MeasurementService { - - GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId); - - GearPhysicalMeasurement getGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, Integer pmfmId); - -} \ No newline at end of file Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2013-01-31 00:04:37 UTC (rev 274) @@ -420,6 +420,16 @@ public Caracteristic getSortedUnsortedCaracteristic() { Integer pmfmId = enumeration.PMFM_ID_SORTED_UNSORTED; Caracteristic result = getCaracteristic(pmfmId); + + // Search the qualitative value to skip + for (Iterator iterator = result.getQualitativeValue().iterator(); iterator.hasNext();) { + CaracteristicQualitativeValue qv = (CaracteristicQualitativeValue) iterator.next(); + if (qv != null && qv.getId() != null + && enumeration.QUALITATIVE_UNSORTED_ID.equals(Integer.valueOf(qv.getId()))) { + result.removeQualitativeValue(qv); + break; + } + } return result; } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2013-01-31 00:04:37 UTC (rev 274) @@ -75,6 +75,7 @@ import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; import fr.ifremer.tutti.persistence.entities.referential.Species; +import fr.ifremer.tutti.persistence.service.measure.MeasurementPersistenceHelper; /** * @author tchemit <chemit(a)codelutin.com> @@ -99,6 +100,9 @@ @Resource(name = "catchBatchDao") protected CatchBatchDao catchBatchDao; + + @Resource(name = "measurementPersistenceHelper") + protected MeasurementPersistenceHelper measurementHelper; @Override public List<SpeciesBatch> getAllRootSpeciesBatch(String fishingOperationId) { @@ -149,7 +153,7 @@ // Sample category type Integer pmfmId = (Integer)source[colIndex++]; if (pmfmId != null) { - SampleCategoryEnum sampleCategory = pmfmId2SampleCategory(pmfmId); + SampleCategoryEnum sampleCategory = measurementHelper.pmfmId2SampleCategory(pmfmId); result.setSampleCategoryType(sampleCategory); } @@ -183,12 +187,6 @@ beanToEntity(bean, batch, parentBatchId, true); batch = sortingBatchDao.create(batch); - // DenormalizedBatch denormalizedBatch = - // DenormalizedBatch.Factory.newInstance(); - // denormalizedBatch.setId((long)batch.getId()); - // beanToEntity(bean, denormalizedBatch, parentBatchId, true); - // denormalizedBatchDao.create(denormalizedBatch); - bean.setId(String.valueOf(batch.getId())); return bean; } @@ -244,6 +242,7 @@ Integer recorderDepartmentId = enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; // Retrieve entity Root batch + //source.getFishingOperation().get Integer fishingOperationId = Integer.valueOf(source.getFishingOperation().getId()); Integer rootBatchId = getRootBatchId(fishingOperationId); if (rootBatchId == null) { @@ -310,11 +309,11 @@ // Nothing to do : will be removed later, using notChangedSortingMeasurements } else if (source.getSampleCategoryWeight() != null){ - QuantificationMeasurement quantificationMeasurement = setQuantificationMeasurement(target, enumeration.PMFM_ID_WEIGHT_MEASURED, recorderDepartmentId, source.getSampleCategoryWeight(), true); + QuantificationMeasurement quantificationMeasurement = measurementHelper.setQuantificationMeasurement(target, enumeration.PMFM_ID_WEIGHT_MEASURED, recorderDepartmentId, source.getSampleCategoryWeight(), true); notChangedQuantificationMeasurements.remove(quantificationMeasurement); } else if (source.getWeight() != null){ - QuantificationMeasurement quantificationMeasurement = setQuantificationMeasurement(target, enumeration.PMFM_ID_WEIGHT_MEASURED, recorderDepartmentId, source.getWeight(), true); + QuantificationMeasurement quantificationMeasurement = measurementHelper.setQuantificationMeasurement(target, enumeration.PMFM_ID_WEIGHT_MEASURED, recorderDepartmentId, source.getWeight(), true); notChangedQuantificationMeasurements.remove(quantificationMeasurement); } @@ -335,7 +334,7 @@ // Nothing to do : will be removed later, using notChangedSortingMeasurements } else if (source.getSampleCategoryType() != null && source.getSampleCategoryValue() != null) { - SortingMeasurement sortingMeasurement = setSortingMeasurement(target, recorderDepartmentId, source.getSampleCategoryType(), source.getSampleCategoryValue()); + SortingMeasurement sortingMeasurement = measurementHelper.setSortingMeasurement(target, recorderDepartmentId, source.getSampleCategoryType(), source.getSampleCategoryValue()); notChangedSortingMeasurements.remove(sortingMeasurement); } @@ -383,288 +382,13 @@ target.getSortingMeasurements().remove(sm); } } - } + } - protected void beanToEntity(SpeciesBatch source, DenormalizedBatch target, - String parentBatchId, boolean copyIfNull) { - - // Parent batch - if (copyIfNull && parentBatchId == null) { - target.setParentBatch(null); - ; - } else if (parentBatchId != null) { - target.setParentBatch(load(DenormalizedBatchImpl.class, - Integer.valueOf(parentBatchId))); - } - - // Weight - if (copyIfNull && source.getWeight() == null) { - target.setWeight(null); - } else if (source.getWeight() != null) { - target.setWeight(source.getWeight()); - } - - // SampleCategoryWeight - if (copyIfNull - && (source.getSampleCategoryWeight() == null || source - .getWeight() == null)) { - target.setSamplingRatio(null); - target.setSamplingRatioText(null); - } else if (source.getSampleCategoryWeight() != null - && source.getWeight() != null) { - String samplingRatioText = source.getSampleCategoryWeight() + "/" - + source.getWeight(); - samplingRatioText = samplingRatioText.replaceAll(",", "."); - target.setSamplingRatioText(samplingRatioText); - target.setSamplingRatio(source.getSampleCategoryWeight() - .floatValue() / source.getWeight().floatValue()); - } - - // Rank order - if (copyIfNull && source.getNumber() == null) { - target.setRankOrder(null); - target.setFlatRankOrder(null); - } else if (source.getNumber() != null) { - target.setRankOrder(Short.valueOf(source.getNumber().toString())); - } - - // Flat rank order - target.setFlatRankOrder(target.getRankOrder()); - - // Tree level - if (parentBatchId == null) { - // TODO BLA : à confirmer une fois l'arbre d'échantillonnage créé - target.setTreeLevel((short) 2); - } else { - short treeLevel = 1; - SpeciesBatch item = source; - do { - treeLevel++; - item = item.getParentBatch(); - } while (item != null); - target.setTreeLevel(treeLevel); - } - - // Species - if (copyIfNull && source.getSpecies() == null) { - target.setReferenceTaxon(null); - target.setInheritedReferenceTaxon(null); - } else if (source.getSpecies() != null) { - ReferenceTaxon referenceTaxon = load(ReferenceTaxonImpl.class, - Integer.valueOf(source.getSpecies().getId())); - if (source.getParentBatch() == null) { - target.setReferenceTaxon(referenceTaxon); - // TODO BLA : vérifier que sous Allegro on affecte aussi - // inherited quand - // une valeur non héritée a été saisie. - target.setInheritedReferenceTaxon(referenceTaxon); - } else { - target.setInheritedReferenceTaxon(referenceTaxon); - target.setReferenceTaxon(null); - } - } - - // QualityFlag (using SpeciesToConfirm) - if (source.isSpeciesToConfirm()) { - target.setQualityFlag(load(QualityFlagImpl.class, - enumeration.QUALITY_FLAG_CODE_DOUBTFUL)); - } else { - target.setQualityFlag(load(QualityFlagImpl.class, - enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - } - - // Comments - if (copyIfNull && source.getComment() == null) { - target.setComments(null); - } else if (source.getComment() != null) { - target.setComments(source.getComment()); - } - - // Other mandatory properties : - target.setIsLanding(false); - target.setIsDiscard(false); - } - public Integer getRootBatchId(Integer fishingOperationId) { Integer catchBatchId = queryUniqueTyped("fishingOperationCatchBatch", "fishingOperationId", IntegerType.INSTANCE, fishingOperationId); return catchBatchId; } - protected QuantificationMeasurement setQuantificationMeasurement( - Batch batch, Integer pmfmId, Integer recorderDepartmentId, - Float weightValue, boolean isReferenceSorting) { - QuantificationMeasurement quantificationMeasurement = getQuantificationMeasurement( - batch, pmfmId, recorderDepartmentId, true); - quantificationMeasurement.setNumericalValue(weightValue); - quantificationMeasurement - .setIsReferenceQuantification(isReferenceSorting); - return quantificationMeasurement; - } - - protected QuantificationMeasurement getQuantificationMeasurement( - Batch batch, Integer pmfmId, Integer recorderDepartmentId, - boolean createIfNotExists) { - QuantificationMeasurement quantificationMeasurement = null; - if (batch.getQuantificationMeasurements() != null) { - for (Iterator iterator = batch - .getQuantificationMeasurements().iterator(); iterator - .hasNext();) { - QuantificationMeasurement qm = (QuantificationMeasurement) iterator - .next(); - if (pmfmId.equals(qm.getPmfm().getId())) { - quantificationMeasurement = qm; - break; - } - } - } - if (quantificationMeasurement == null) { - if (!createIfNotExists) { - return null; - } - quantificationMeasurement = QuantificationMeasurement.Factory - .newInstance(); - quantificationMeasurement.setBatch(batch); - if (batch.getQuantificationMeasurements() == null) { - batch.setQuantificationMeasurements(Sets - .newHashSet(quantificationMeasurement)); - } else { - batch.getQuantificationMeasurements().add( - quantificationMeasurement); - } - quantificationMeasurement.setQualityFlag(load( - QualityFlagImpl.class, - enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - quantificationMeasurement.setDepartment(load(DepartmentImpl.class, - recorderDepartmentId)); - quantificationMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); - } - - return quantificationMeasurement; - } - - protected void setMeasurement(Measurement measurement, Caracteristic caracteristic, Serializable value) { - if (caracteristic.getCaracteristicType() == CaracteristicType.TEXT) { - measurement.setAlphanumericalValue((String)value); - } - else if (caracteristic.getCaracteristicType() == CaracteristicType.NUMBER) { - measurement.setNumericalValue((Float)value); - } - else if (caracteristic.getCaracteristicType() == CaracteristicType.QUALITATIVE) { - Integer qvId = null; - if (value instanceof Integer) { - qvId = (Integer)value; - } - else { - qvId = Integer.valueOf(value.toString()); - } - QualitativeValue qv = load(QualitativeValueImpl.class, qvId); - measurement.setQualitativeValue(qv); - } - } - - protected SortingMeasurement setSortingMeasurement( - SortingBatch sortingBatch, Integer recorderDepartmentId, - SampleCategoryEnum sampleCategory, Serializable value) { - Preconditions.checkNotNull(sampleCategory); - Preconditions.checkNotNull(value); - - Integer pmfmId = sampleCategory2PmfmId(sampleCategory); - - Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); - SortingMeasurement sortingMeasurement = getSortingMeasurement( - sortingBatch, pmfmId, recorderDepartmentId, true); - setMeasurement(sortingMeasurement, caracteristic, value); - return sortingMeasurement; - } - - protected SortingMeasurement getSortingMeasurement( - SortingBatch sortingBatch, Integer pmfmId, Integer recorderDepartmentId, - boolean createIfNotExists) { - SortingMeasurement sortingMeasurement = null; - if (sortingBatch.getSortingMeasurements() != null) { - for (Iterator iterator = sortingBatch - .getSortingMeasurements().iterator(); iterator - .hasNext();) { - SortingMeasurement qm = (SortingMeasurement) iterator - .next(); - if (pmfmId.equals(qm.getPmfm().getId())) { - sortingMeasurement = qm; - break; - } - } - } - if (sortingMeasurement == null) { - if (!createIfNotExists) { - return null; - } - sortingMeasurement = SortingMeasurement.Factory - .newInstance(); - sortingMeasurement.setSortingBatch(sortingBatch); - if (sortingBatch.getSortingMeasurements() == null) { - sortingBatch.setSortingMeasurements(Sets - .newHashSet(sortingMeasurement)); - sortingMeasurement.setRankOrder(1); - } else { - sortingBatch.getSortingMeasurements().add( - sortingMeasurement); - sortingMeasurement.setRankOrder(sortingBatch.getSortingMeasurements().size()); - } - sortingMeasurement.setQualityFlag(load( - QualityFlagImpl.class, - enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - sortingMeasurement.setDepartment(load(DepartmentImpl.class, - recorderDepartmentId)); - sortingMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); - } - - return sortingMeasurement; - } - - protected Integer sampleCategory2PmfmId(SampleCategoryEnum sampleCategory) { - Integer pmfmId = null; - if (sampleCategory == SampleCategoryEnum.sortedUnsorted) { - pmfmId = enumeration.PMFM_ID_SORTED_UNSORTED; - } - else if (sampleCategory == SampleCategoryEnum.size) { - pmfmId = enumeration.PMFM_ID_SIZE_CATEGORY; - } - else if (sampleCategory == SampleCategoryEnum.maturity) { - pmfmId = enumeration.PMFM_ID_MATURITY; - } - else if (sampleCategory == SampleCategoryEnum.sex) { - pmfmId = enumeration.PMFM_ID_SEX; - } - else if (sampleCategory == SampleCategoryEnum.age) { - pmfmId = enumeration.PMFM_ID_AGE; - } - if (pmfmId == null) { - throw new IllegalArgumentException("Unable to find corresponding PMFM.ID for sampleCategory : " + sampleCategory.name()); - } - return pmfmId; - } - - protected SampleCategoryEnum pmfmId2SampleCategory(Integer pmfmId) { - SampleCategoryEnum sampleCategory = null; - if (pmfmId.intValue() == enumeration.PMFM_ID_SORTED_UNSORTED.intValue()) { - sampleCategory = SampleCategoryEnum.sortedUnsorted; - } - else if (enumeration.PMFM_ID_SIZE_CATEGORY.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.size; - } - else if (enumeration.PMFM_ID_MATURITY.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.maturity; - } - else if (enumeration.PMFM_ID_SEX.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.sex; - } - else if (enumeration.PMFM_ID_AGE.equals(pmfmId)) { - sampleCategory = SampleCategoryEnum.age; - } - if (sampleCategory == null) { - throw new IllegalArgumentException("Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); - } - return sampleCategory; - } } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java 2013-01-31 00:04:37 UTC (rev 274) @@ -85,6 +85,9 @@ @Value("${PmfmId.MARINE_LITTER_SIZE_CATEGORY}") public final Integer PMFM_ID_MARINE_LITTER_SIZE_CATEGORY = null; + + @Value("${PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE}") + public final Integer PMFM_ID_SORTING_TYPE = null; @Value("${UnitId.NONE}") public final Integer UNIT_ID_NONE = null; @@ -110,9 +113,18 @@ @Value("${LocationLevelId.RECTANGLE_STATISTIQUE}") public final Integer RECTANGLE_STATISTIQUE = null; - @Value("${QualitativeValueId.VRAC}") + @Value("${QualitativeValueId.SORTED_VRAC}") public final Integer QUALITATIVE_VRAC_ID = null; + @Value("${QualitativeValueId.SORTED_HORS_VRAC}") + public final Integer QUALITATIVE_HORS_VRAC_ID = null; + + @Value("${QualitativeValueId.UNSORTED}") + public final Integer QUALITATIVE_UNSORTED_ID = null; + + @Value("${QualitativeValueId.SORTING_TYPE_SPECIES}") + public final Integer QUALITATIVE_ID_SORTING_TYPE_SPECIES= null; + @Value("${StatusCode.ENABLE}") public final String STATUS_VALID_CODE = null; Added: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java (rev 0) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/measure/MeasurementPersistenceHelper.java 2013-01-31 00:04:37 UTC (rev 274) @@ -0,0 +1,345 @@ +package fr.ifremer.tutti.persistence.service.measure; + +import java.io.Serializable; +import java.util.Iterator; + +import javax.annotation.Resource; + +import org.springframework.beans.factory.annotation.Autowired; +import org.springframework.stereotype.Component; + +import com.google.common.base.Preconditions; +import com.google.common.collect.Lists; +import com.google.common.collect.Sets; + +import fr.ifremer.adagio.core.dao.administration.user.DepartmentImpl; +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; +import fr.ifremer.adagio.core.dao.data.measure.GearPhysicalMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.Measurement; +import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; +import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; +import fr.ifremer.adagio.core.dao.data.vessel.feature.physical.GearPhysicalFeatures; +import fr.ifremer.adagio.core.dao.referential.QualityFlagDao; +import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.gear.GearImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; +import fr.ifremer.tutti.persistence.entities.data.SampleCategoryEnum; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; +import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; + +@Component("measurementPersistenceHelper") +public class MeasurementPersistenceHelper extends AbstractPersistenceService { + + @Autowired(required=true) + protected TuttiEnumerationFile enumeration; + + @Resource(name = "referentialPersistenceService") + protected ReferentialPersistenceService referentialService; + + @Resource(name = "qualityFlagDao") + protected QualityFlagDao qualityFlagDao; + + public MeasurementPersistenceHelper() { + } + + public QuantificationMeasurement setQuantificationMeasurement( + Batch batch, Integer pmfmId, Integer recorderDepartmentId, + Float weightValue, boolean isReferenceSorting) { + QuantificationMeasurement quantificationMeasurement = getQuantificationMeasurement( + batch, pmfmId, recorderDepartmentId, true); + + quantificationMeasurement.setNumericalValue(weightValue); + quantificationMeasurement + .setIsReferenceQuantification(isReferenceSorting); + return quantificationMeasurement; + } + + public QuantificationMeasurement getQuantificationMeasurement( + Batch batch, Integer pmfmId, Integer recorderDepartmentId, + boolean createIfNotExists) { + QuantificationMeasurement quantificationMeasurement = null; + if (batch.getQuantificationMeasurements() != null) { + for (Iterator iterator = batch + .getQuantificationMeasurements().iterator(); iterator + .hasNext();) { + QuantificationMeasurement qm = (QuantificationMeasurement) iterator + .next(); + if (pmfmId.equals(qm.getPmfm().getId())) { + quantificationMeasurement = qm; + break; + } + } + } + if (quantificationMeasurement == null) { + if (!createIfNotExists) { + return null; + } + quantificationMeasurement = QuantificationMeasurement.Factory + .newInstance(); + quantificationMeasurement.setBatch(batch); + if (batch.getQuantificationMeasurements() == null) { + batch.setQuantificationMeasurements(Sets + .newHashSet(quantificationMeasurement)); + } else { + batch.getQuantificationMeasurements().add( + quantificationMeasurement); + } + quantificationMeasurement.setQualityFlag(load( + QualityFlagImpl.class, + enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + quantificationMeasurement.setDepartment(load(DepartmentImpl.class, + recorderDepartmentId)); + quantificationMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); + } + + return quantificationMeasurement; + } + + public void setMeasurement(Measurement measurement, Caracteristic caracteristic, Serializable value) { + if (caracteristic.getCaracteristicType() == CaracteristicType.TEXT) { + measurement.setAlphanumericalValue((String)value); + } + else if (caracteristic.getCaracteristicType() == CaracteristicType.NUMBER) { + measurement.setNumericalValue((Float)value); + } + else if (caracteristic.getCaracteristicType() == CaracteristicType.QUALITATIVE) { + Integer qvId = null; + if (value instanceof Integer) { + qvId = (Integer)value; + } + else { + qvId = Integer.valueOf(value.toString()); + } + QualitativeValue qv = load(QualitativeValueImpl.class, qvId); + measurement.setQualitativeValue(qv); + } + } + + public SortingMeasurement setSortingMeasurement( + SortingBatch sortingBatch, Integer recorderDepartmentId, + SampleCategoryEnum sampleCategory, Serializable value) { + Preconditions.checkNotNull(sampleCategory); + Preconditions.checkNotNull(value); + + Integer pmfmId = sampleCategory2PmfmId(sampleCategory); + + Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); + SortingMeasurement sortingMeasurement = getSortingMeasurement( + sortingBatch, pmfmId, recorderDepartmentId, true); + setMeasurement(sortingMeasurement, caracteristic, value); + return sortingMeasurement; + } + + public SortingMeasurement setSortingMeasurement( + SortingBatch sortingBatch, Integer recorderDepartmentId, + Integer pmfmId, Serializable value) { + Preconditions.checkNotNull(pmfmId); + Preconditions.checkNotNull(value); + + Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); + SortingMeasurement sortingMeasurement = getSortingMeasurement( + sortingBatch, pmfmId, recorderDepartmentId, true); + setMeasurement(sortingMeasurement, caracteristic, value); + return sortingMeasurement; + } + + public SortingMeasurement getSortingMeasurement( + SortingBatch sortingBatch, Integer pmfmId, Integer recorderDepartmentId, + boolean createIfNotExists) { + SortingMeasurement sortingMeasurement = null; + if (sortingBatch.getSortingMeasurements() != null) { + for (Iterator iterator = sortingBatch + .getSortingMeasurements().iterator(); iterator + .hasNext();) { + SortingMeasurement qm = (SortingMeasurement) iterator + .next(); + if (pmfmId.equals(qm.getPmfm().getId())) { + sortingMeasurement = qm; + break; + } + } + } + if (sortingMeasurement == null) { + if (!createIfNotExists) { + return null; + } + sortingMeasurement = SortingMeasurement.Factory + .newInstance(); + sortingMeasurement.setSortingBatch(sortingBatch); + if (sortingBatch.getSortingMeasurements() == null) { + sortingBatch.setSortingMeasurements(Sets + .newHashSet(sortingMeasurement)); + sortingMeasurement.setRankOrder(1); + } else { + sortingBatch.getSortingMeasurements().add( + sortingMeasurement); + sortingMeasurement.setRankOrder(sortingBatch.getSortingMeasurements().size()); + } + sortingMeasurement.setQualityFlag(load( + QualityFlagImpl.class, + enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + sortingMeasurement.setDepartment(load(DepartmentImpl.class, + recorderDepartmentId)); + sortingMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); + } + + return sortingMeasurement; + } + + public Integer sampleCategory2PmfmId(SampleCategoryEnum sampleCategory) { + Integer pmfmId = null; + if (sampleCategory == SampleCategoryEnum.sortedUnsorted) { + pmfmId = enumeration.PMFM_ID_SORTED_UNSORTED; + } + else if (sampleCategory == SampleCategoryEnum.size) { + pmfmId = enumeration.PMFM_ID_SIZE_CATEGORY; + } + else if (sampleCategory == SampleCategoryEnum.maturity) { + pmfmId = enumeration.PMFM_ID_MATURITY; + } + else if (sampleCategory == SampleCategoryEnum.sex) { + pmfmId = enumeration.PMFM_ID_SEX; + } + else if (sampleCategory == SampleCategoryEnum.age) { + pmfmId = enumeration.PMFM_ID_AGE; + } + if (pmfmId == null) { + throw new IllegalArgumentException("Unable to find corresponding PMFM.ID for sampleCategory : " + sampleCategory.name()); + } + return pmfmId; + } + + public SampleCategoryEnum pmfmId2SampleCategory(Integer pmfmId) { + SampleCategoryEnum sampleCategory = null; + if (pmfmId.intValue() == enumeration.PMFM_ID_SORTED_UNSORTED.intValue()) { + sampleCategory = SampleCategoryEnum.sortedUnsorted; + } + else if (enumeration.PMFM_ID_SIZE_CATEGORY.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.size; + } + else if (enumeration.PMFM_ID_MATURITY.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.maturity; + } + else if (enumeration.PMFM_ID_SEX.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.sex; + } + else if (enumeration.PMFM_ID_AGE.equals(pmfmId)) { + sampleCategory = SampleCategoryEnum.age; + } + if (sampleCategory == null) { + throw new IllegalArgumentException("Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); + } + return sampleCategory; + } + + public GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId) { + return getGearPhysicalfeatures(fishingTrip, gearId, false); + } + + public GearPhysicalFeatures getGearPhysicalfeatures(FishingTrip fishingTrip, Integer gearId, boolean createIfNotExists) { + // Retrieve entities : Gear Physical Features + if (fishingTrip.getGearPhysicalFeatures() != null && fishingTrip.getGearPhysicalFeatures().size() >= 0) { + for (Iterator iterator = fishingTrip.getGearPhysicalFeatures().iterator(); iterator.hasNext();) { + GearPhysicalFeatures guf = (GearPhysicalFeatures) iterator.next(); + if (gearId.equals(guf.getGear().getId())) { + return guf; + } + } + } + if (!createIfNotExists) { + return null; + } + + GearPhysicalFeatures gearPhysicalFeature = GearPhysicalFeatures.Factory.newInstance(); + gearPhysicalFeature.setFishingTrip(fishingTrip); + + fr.ifremer.adagio.core.dao.referential.gear.Gear gear = (fr.ifremer.adagio.core.dao.referential.gear.Gear)getCurrentSession().load(GearImpl.class, gearId); + gearPhysicalFeature.setGear(gear); + if (fishingTrip.getGearPhysicalFeatures() == null) { + fishingTrip.setGearPhysicalFeatures(Lists.newArrayList(gearPhysicalFeature)); + } else { + fishingTrip.getGearPhysicalFeatures().add(gearPhysicalFeature); + } + + return gearPhysicalFeature; + } + + public GearPhysicalMeasurement getGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, Integer pmfmId) { + return getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); + } + + protected GearPhysicalMeasurement getGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, + Integer pmfmId, boolean createIfNotExists) { + GearPhysicalMeasurement gearPhysicalMeasurement = null; + if (gearPhysicalFeatures.getGearPhysicalMeasurements() != null) { + for (Iterator iterator = gearPhysicalFeatures.getGearPhysicalMeasurements().iterator(); iterator.hasNext();) { + GearPhysicalMeasurement vum = (GearPhysicalMeasurement) iterator.next(); + if (pmfmId.equals(vum.getPmfm().getId())) { + gearPhysicalMeasurement = vum; + break; + } + } + } + if (gearPhysicalMeasurement == null) { + if (!createIfNotExists) { + return null; + } + gearPhysicalMeasurement = GearPhysicalMeasurement.Factory.newInstance(); + gearPhysicalMeasurement.setGearPhysicalFeatures(gearPhysicalFeatures); + if (gearPhysicalFeatures.getGearPhysicalMeasurements() == null) { + gearPhysicalFeatures.setGearPhysicalMeasurements(Lists.newArrayList(gearPhysicalMeasurement)); + } + else { + gearPhysicalFeatures.getGearPhysicalMeasurements().add(gearPhysicalMeasurement); + } + gearPhysicalMeasurement.setQualityFlag(qualityFlagDao.load(enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + gearPhysicalMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); + Pmfm pmfm = (Pmfm)getCurrentSession().load(PmfmImpl.class, pmfmId); + gearPhysicalMeasurement.setPmfm(pmfm); + //gearPhysicalMeasurement.setPmfm(pmfmDao.load(pmfmId)); + } + + return gearPhysicalMeasurement; + } + + public void removeGearPhysicalMeasurement(GearPhysicalFeatures gearPhysicalFeatures, + Integer pmfmId) { + GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(null, gearPhysicalFeatures, pmfmId, false); + if (gearPhysicalMeasurement == null) { + return; + } + gearPhysicalFeatures.getGearPhysicalMeasurements().remove(gearPhysicalMeasurement); + // TOBO BLa : vérifier qu'il ne faut pas dao.delete() en plus + } + + public GearPhysicalMeasurement setGearPhysicalMeasurement(ScientificCruise scientificCruise, GearPhysicalFeatures gearPhysicalFeatures, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + GearPhysicalMeasurement gearPhysicalMeasurement = getGearPhysicalMeasurement(scientificCruise, gearPhysicalFeatures, pmfmId, true); + + if (alphanumericalValue != null) { + gearPhysicalMeasurement.setAlphanumericalValue(alphanumericalValue); + } + else if (numericalValue != null) { + gearPhysicalMeasurement.setNumericalValue(numericalValue); + } + else if (qualitativevalueId != null) { + QualitativeValue qv = (QualitativeValue)getCurrentSession().load(QualitativeValueImpl.class, qualitativevalueId); + gearPhysicalMeasurement.setQualitativeValue(qv); + //gearPhysicalMeasurement.setQualitativeValue(qualitativeValueDao.load(qualitativevalueId)); + } + + return gearPhysicalMeasurement; + } +} Added: trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml (rev 0) +++ trunk/tutti-persistence-adagio/src/main/resources/ehcache.xml 2013-01-31 00:04:37 UTC (rev 274) @@ -0,0 +1,62 @@ +<?xml version="1.0" encoding="UTF-8"?> +<ehcache xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" + xsi:schemaLocation="http://ehcache.org/ehcache.xsd" + updateCheck="false"> + +  + <diskStore path="java.io.tmpdir/ehcache"/> + +  + <defaultCache + maxElementsInMemory="10000" + eternal="false" + timeToIdleSeconds="120" + timeToLiveSeconds="120" + overflowToDisk="true" /> + +  + <cache name="allFishingVessel" eternal="true" + maxElementsInMemory="1" + memoryStoreEvictionPolicy="LFU"/> + + <cache name="org.hibernate.cache.UpdateTimestampsCache" + maxElementsInMemory="5000" timeToIdleSeconds="300" + timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" + diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> + + <cache name="org.hibernate.cache.StandardQueryCache" + maxElementsInMemory="10000" eternal="false" timeToIdleSeconds="300" + timeToLiveSeconds="300" overflowToDisk="true" diskPersistent="false" + diskExpiryThreadIntervalSeconds="300" memoryStoreEvictionPolicy="LRU" /> + +</ehcache> \ No newline at end of file Modified: trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml 2013-01-31 00:04:37 UTC (rev 274) @@ -278,16 +278,76 @@ <query-param name="catchBatchId" type="java.lang.Integer"/> </query> - <query cacheable="true" name="fishingOperationCatchBatch"> + <query cacheable="true" name="catchBatch"> <![CDATA[ SELECT - cb.id + cb.id AS catchBatchId, + cbQm.numericalValue as totalWeight, + b1.id AS id1, + b1.samplingRatioText as samplingRatioText1, + (select qm.numericalValue from QuantificationMeasurementImpl qm where qm.batch.id=b1.id and qm.isReferenceQuantification=true) AS weight1, + (select sm.qualitativeValue.id from SortingMeasurementImpl sm where sm.sortingBatch.id=b1.id and sm.pmfm.id=:pmfmIdSorted) AS qv2, + b2.id AS id2, + b2.samplingRatioText AS samplingRatioText2, + (select qm.numericalValue from QuantificationMeasurementImpl qm where qm.batch.id=b2.id and qm.isReferenceQuantification=true) AS weight2, + (select sm.qualitativeValue.id from SortingMeasurementImpl sm where sm.sortingBatch.id=b2.id and sm.pmfm.id=:pmfmIdSortingType) AS qv2 FROM CatchBatchImpl cb + INNER JOIN cb.childBatchs b1 + LEFT OUTER JOIN b1.childBatchs b2 + LEFT OUTER JOIN cb.quantificationMeasurements cbQm WHERE cb.fishingOperation.id = :fishingOperationId + AND ( + cbQm is null + OR cbQm.isReferenceQuantification=true + ) + ORDER BY b1.id, b2.id ]]> +  <query-param name="fishingOperationId" type="java.lang.Integer"/> + <query-param name="pmfmIdSorted" type="java.lang.Integer"/> + <query-param name="pmfmIdSortingType" type="java.lang.Integer"/> </query>  <fetch-profile name="batch-with-measurements"> + <fetch entity="BatchImpl" association="quantificationMeasurements" style="join"/> <fetch entity="CatchBatchImpl" association="quantificationMeasurements" style="join"/> <fetch entity="SortingBatchImpl" association="sortingMeasurements" style="join"/> <fetch entity="SortingBatchImpl" association="quantificationMeasurements" style="join"/> </fetch-profile> + <fetch-profile name="batch-with-childs"> + <fetch entity="BatchImpl" association="childBatchs" style="join"/> + </fetch-profile> </hibernate-mapping> Modified: trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties 2013-01-31 00:04:37 UTC (rev 274) @@ -317,7 +317,6 @@ PmfmId.SEX=196 PmfmId.SIZE_CATEGORY=198 -PmfmId.SORTED_UNSORTED=200 PmfmId.AGE=1430 # Catégorie maturité @@ -352,6 +351,21 @@ # PSFM "Poids - observation par une observateur" (écran captures, onglet espèce, benthos, etc) PmfmId.WEIGHT_MEASURED=220 +# TODO A creer (dans les enumerations Allegro) +# PSFM "Vaac/Hors Vrac" - "Organisation des données campagnes" +PmfmId.SORTED_UNSORTED=1428 +QualitativeValueId.SORTED_VRAC=311 +QualitativeValueId.SORTED_HORS_VRAC=310 +QualitativeValueId.UNSORTED=2146 + +PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE=1429 +QualitativeValueId.SORTING_TYPE_SPECIES=2147 +QualitativeValueId.SORTING_TYPE_BENTHOS=2148 +QualitativeValueId.SORTING_TYPE_PLANCTON=2149 +QualitativeValueId.SORTING_TYPE_MACRO_WASTE=2150 +QualitativeValueId.SORTING_TYPE_ACCIDENTAL_CATCH=2151 + + #TODO A creer (dans les enumerations Allegro) # (20=observateur volant, 95=Administrateur SIH) -> L'avantage du 20 est qu'il est inactif (=20), donc plus facilement detectable PersonId.UNKNOWN_RECORDER_PERSON=20 Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImplTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImplTest.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImplTest.java 2013-01-31 00:04:37 UTC (rev 274) @@ -24,7 +24,19 @@ * #L% */ +import static org.junit.Assert.*; + +import java.util.Calendar; +import java.util.Date; +import java.util.GregorianCalendar; +import java.util.List; + import fr.ifremer.tutti.persistence.DatabaseResource; +import fr.ifremer.tutti.persistence.entities.data.CatchBatch; +import fr.ifremer.tutti.persistence.entities.data.Cruise; +import fr.ifremer.tutti.persistence.entities.data.FishingOperation; +import fr.ifremer.tutti.persistence.entities.referential.Species; + import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.junit.Before; @@ -46,9 +58,47 @@ protected CatchBatchPersistenceService service; + protected CruisePersistenceService cruiseService; + protected FishingOperationPersistenceService fishingOperationService; + protected ReferentialPersistenceService referentialService; + + protected Cruise cruise; + protected FishingOperation fishingOperation; + protected List<Species> species; + @Before public void setUp() throws Exception { service = TuttiPersistenceServiceLocator.getCatchBatchPersistenceService(); + cruiseService = TuttiPersistenceServiceLocator.getCruisePersistenceService(); + fishingOperationService = TuttiPersistenceServiceLocator.getFishingOperationPersistenceService(); + referentialService = TuttiPersistenceServiceLocator.getReferentialPersistenceService(); + + cruise = cruiseService.getCruise(dbResource.getFixtures().cruiseId()); + cruise.setId(null); + Calendar calendar = new GregorianCalendar(); + cruise.setBeginDate(calendar.getTime()); + cruise.setYear(calendar.get(Calendar.YEAR)); + calendar.add(Calendar.MONTH, 1); // add one month + cruise.setEndDate(calendar.getTime()); + cruise = cruiseService.createCruise(cruise); + + List<FishingOperation> fishingOperations = fishingOperationService.getAllFishingOperation(dbResource.getFixtures().cruiseId()); + assertNotNull(fishingOperations); + assertTrue(fishingOperations.size() > 0); + fishingOperation = fishingOperations.get(0); + fishingOperation = fishingOperationService.getFishingOperation(fishingOperation.getId()); + fishingOperation.setId(null); + fishingOperation.setCruise(cruise); + calendar.setTime(new Date()); + calendar.set(Calendar.HOUR_OF_DAY, 1); + calendar.set(Calendar.MILLISECOND, 0); + fishingOperation.setGearShootingStartDate(calendar.getTime()); + calendar.setTime(new Date()); + calendar.set(Calendar.HOUR_OF_DAY, 10); + calendar.set(Calendar.MILLISECOND, 0); + fishingOperation.setGearShootingEndDate(calendar.getTime()); + + fishingOperation = fishingOperationService.createFishingOperation(fishingOperation); } @Test @@ -57,14 +107,98 @@ //TODO } - @Test - public void createCatchBatch() throws Exception { - //TODO - } + @Test + public void createAndSaveCatchBatch() throws Exception { + CatchBatch catchBatch = null; + CatchBatch createdCatchBatch = null; + CatchBatch reloadedCatchBatch = null; + + catchBatch = new CatchBatch(); + catchBatch.setFishingOperation(fishingOperation); + + // ----------------------------------------------------------------------------- + // 1. Test with only mandatory properties + // ----------------------------------------------------------------------------- - @Test - public void saveCatchBatch() throws Exception { + // Create and reload (test round trip) + createdCatchBatch = service.createCatchBatch(catchBatch); + assertNotNull(createdCatchBatch); + assertNotNull(createdCatchBatch.getId()); + + reloadedCatchBatch = service.getCatchBatchFromFishingOperation(fishingOperation.getId()); + assertNotNull(reloadedCatchBatch); + assertEquals(createdCatchBatch.getId(), reloadedCatchBatch.getId()); + + // ----------------------------------------------------------------------------- + // 2. Test with all properties + // ----------------------------------------------------------------------------- + catchBatch.setId(null); + // total weight : 100kg + catchBatch.setCatchTotalWeight(75f); + // Vrac : + { + // note : poids trie par la balance tremis (thalassa) (init par pupitri) + catchBatch.setCatchTotalSortedTremisWeight(50f); + // note : poids vrac caroussel (thalassa) (init par pupitri) (vrac trie) ou bien "poids trié fournie par la table de tri (Sum(Si) + catchBatch.setCatchTotalSortedCarousselWeight(45f); + + // Species + { + catchBatch.setSpeciesTotalSortedWeight(12f); + catchBatch.setSpeciesTotalSampleSortedWeight(8f); + } + } + // Hors Vrac : 10kg + { + catchBatch.setCatchTotalUnsortedWeight(10f); + + // Species + { + catchBatch.setSpeciesTotalUnsortedWeight(10f); + } + } + // Rejet : 15kg + catchBatch.setCatchTotalRejectedWeight(15f); - //TODO + // Create and reload (test round trip) + createdCatchBatch = service.createCatchBatch(catchBatch); + assertNotNull(createdCatchBatch); + assertNotNull(createdCatchBatch.getId()); + + reloadedCatchBatch = service.getCatchBatchFromFishingOperation(fishingOperation.getId()); + assertNotNull(reloadedCatchBatch); + assertEquals(createdCatchBatch.getCatchTotalWeight(), reloadedCatchBatch.getCatchTotalWeight()); + assertEquals(createdCatchBatch.getCatchTotalSortedCarousselWeight(), reloadedCatchBatch.getCatchTotalSortedCarousselWeight()); + assertEquals(createdCatchBatch.getCatchTotalSortedTremisWeight(), reloadedCatchBatch.getCatchTotalSortedTremisWeight()); + assertEquals(createdCatchBatch.getCatchTotalUnsortedWeight(), reloadedCatchBatch.getCatchTotalUnsortedWeight()); + + assertEquals(createdCatchBatch.getSpeciesTotalSampleSortedWeight(), reloadedCatchBatch.getSpeciesTotalSampleSortedWeight()); + assertEquals(createdCatchBatch.getSpeciesTotalSortedWeight(), reloadedCatchBatch.getSpeciesTotalSortedWeight()); + assertEquals(createdCatchBatch.getSpeciesTotalUnsortedWeight(), reloadedCatchBatch.getSpeciesTotalUnsortedWeight()); + + // ----------------------------------------------------------------------------- + // 2. Test save after modification + // ----------------------------------------------------------------------------- + catchBatch.setCatchTotalSortedTremisWeight(null); + catchBatch.setCatchTotalSortedCarousselWeight(null); + catchBatch.setSpeciesTotalSortedWeight(null); + catchBatch.setSpeciesTotalSampleSortedWeight(null); + catchBatch.setCatchTotalUnsortedWeight(null); + catchBatch.setSpeciesTotalUnsortedWeight(null); + CatchBatch savedCatchBatch = service.saveCatchBatch(catchBatch); + assertNotNull(savedCatchBatch); + assertNotNull(savedCatchBatch.getId()); + + reloadedCatchBatch = service.getCatchBatchFromFishingOperation(fishingOperation.getId()); + assertNotNull(reloadedCatchBatch); + assertEquals(createdCatchBatch.getCatchTotalWeight(), reloadedCatchBatch.getCatchTotalWeight()); + assertEquals(createdCatchBatch.getCatchTotalSortedCarousselWeight(), reloadedCatchBatch.getCatchTotalSortedCarousselWeight()); + assertEquals(createdCatchBatch.getCatchTotalSortedTremisWeight(), reloadedCatchBatch.getCatchTotalSortedTremisWeight()); + assertEquals(createdCatchBatch.getCatchTotalUnsortedWeight(), reloadedCatchBatch.getCatchTotalUnsortedWeight()); + + assertEquals(createdCatchBatch.getSpeciesTotalSampleSortedWeight(), reloadedCatchBatch.getSpeciesTotalSampleSortedWeight()); + assertEquals(createdCatchBatch.getSpeciesTotalSortedWeight(), reloadedCatchBatch.getSpeciesTotalSortedWeight()); + assertEquals(createdCatchBatch.getSpeciesTotalUnsortedWeight(), reloadedCatchBatch.getSpeciesTotalUnsortedWeight()); } + } Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java 2013-01-30 17:17:46 UTC (rev 273) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceTest.java 2013-01-31 00:04:37 UTC (rev 274) @@ -47,6 +47,7 @@ * @author tchemit <chemit(a)codelutin.com> * @since 0.3 */ +@Ignore public class SpeciesBatchPersistenceServiceTest { @ClassRule

1 0

r273 - trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service
by blavenier＠users.forge.codelutin.com 30 Jan '13

30 Jan '13

Author: blavenier Date: 2013-01-30 18:17:46 +0100 (Wed, 30 Jan 2013) New Revision: 273 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/273 Log: Ignore one TU Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java 2013-01-30 17:13:52 UTC (rev 272) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java 2013-01-30 17:17:46 UTC (rev 273) @@ -95,6 +95,7 @@ } @Test + @Ignore public void createFishingOperation(/*FishingOperation bean*/) { // ----------------------------------------------------------------------------- // Prepare data and other entities

1 0

r272 - in trunk/tutti-persistence-adagio/src: main/java/fr/ifremer/tutti/persistence/config main/java/fr/ifremer/tutti/persistence/service main/resources test/java/fr/ifremer/tutti/persistence/service
by blavenier＠users.forge.codelutin.com 30 Jan '13

30 Jan '13

Author: blavenier Date: 2013-01-30 18:13:52 +0100 (Wed, 30 Jan 2013) New Revision: 272 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/272 Log: ref refs #1920: [Persistence] Adagio Donnees thematiques - Add cache on getAllFishingVessels - Add persistence for program - Fix TU on Cruise and FishingOperation Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/config/TuttiPersistenceAdagioConfig.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceTest.java Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/config/TuttiPersistenceAdagioConfig.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/config/TuttiPersistenceAdagioConfig.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/config/TuttiPersistenceAdagioConfig.java 2013-01-30 17:13:52 UTC (rev 272) @@ -112,7 +112,7 @@ } public boolean isDbExists() { - File f = new File(getDbDirectory(), getDbName() + ".data"); + File f = new File(getDbDirectory(), /*TODO TC getDbName() not working*/"allegro" + ".data"); return f.exists(); } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2013-01-30 17:13:52 UTC (rev 272) @@ -42,6 +42,7 @@ import org.springframework.dao.DataRetrievalFailureException; import org.springframework.stereotype.Service; +import com.google.common.base.Preconditions; import com.google.common.collect.Lists; import fr.ifremer.adagio.core.dao.administration.user.PersonDao; @@ -147,7 +148,9 @@ "countryLocationLevelId", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_COUNTRY); if (source == null) { - throw new DataRetrievalFailureException("Could not retrieve cruise with id=" + id); + return null; + // TODo TC : manage exception in the UI ? + //throw new DataRetrievalFailureException("Could not retrieve cruise with id=" + id); } Cruise result = new Cruise(); result.setId(id); @@ -275,6 +278,9 @@ @Override public Cruise createCruise(Cruise bean) { + Preconditions.checkNotNull(bean); + Preconditions.checkArgument(bean.getId() == null, "Cruise 'id' must be null to call createCruise()."); + ScientificCruise scientificCruise = ScientificCruise.Factory.newInstance(); cruiseToEntity(bean, scientificCruise, true); scientificCruiseDao.create(scientificCruise); @@ -285,15 +291,17 @@ @Override public Cruise saveCruise(Cruise bean) { - if (bean.getId() == null || bean.getId().isEmpty()) { - throw new IllegalArgumentException("Cruise 'id' must not be null or empty to be saved."); - } + Preconditions.checkNotNull(bean); + Preconditions.checkNotNull(bean.getId(), "Cruise 'id' must not be null or empty to be saved."); + ScientificCruise scientificCruise = scientificCruiseDao.load(Integer.valueOf(bean.getId())); if (scientificCruise == null) { throw new DataRetrievalFailureException("Could not retrieve cruise with id=" + bean.getId()); } cruiseToEntity(bean, scientificCruise, true); + scientificCruiseDao.update(scientificCruise); + return bean; } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2013-01-30 17:13:52 UTC (rev 272) @@ -127,7 +127,9 @@ Iterator<Object[]> list = queryList( "allFishingOperations", - "cruiseId", IntegerType.INSTANCE, Integer.valueOf(cruiseId) + "cruiseId", IntegerType.INSTANCE, Integer.valueOf(cruiseId), + "pmfmIdStationNumber", IntegerType.INSTANCE, enumeration.PMFM_ID_STATION_NUMBER, + "pmfmIdMultirigAggregation", IntegerType.INSTANCE, enumeration.PMFM_ID_MULTIRIG_AGGREGATION ); List<FishingOperation> fishingOperations = new ArrayList<FishingOperation>(); @@ -177,10 +179,10 @@ fishingOperation.setStationNumber(stationNumber); } - // Trawl number net - String trawlNetNumber = (String)source[colIndex++]; - if (trawlNetNumber != null) { - fishingOperation.setMultirigAggregation(trawlNetNumber); + // Multirig Aggregation + String multirigAggregation = (String)source[colIndex++]; + if (multirigAggregation != null) { + fishingOperation.setMultirigAggregation(multirigAggregation); } fishingOperations.add(fishingOperation); @@ -359,7 +361,10 @@ getCurrentSession().clear(); getCurrentSession().setFlushMode(FlushMode.COMMIT); fr.ifremer.adagio.core.dao.data.operation.FishingOperation fishingOperation = fishingOperationDao.load(Integer.valueOf(bean.getId())); - beanToEntity(bean, fishingOperation, true); + if (fishingOperation == null) { + throw new DataRetrievalFailureException("Could not retrieve fishing operation with id="+bean.getId()); + } + beanToEntity(bean, fishingOperation, true); fishingOperationDao.update(fishingOperation); getCurrentSession().flush(); return bean; @@ -583,12 +588,12 @@ target.setCatchBatch(catchBatch); }*/ - // Retrieve trawl net, from Gear physical features - int trawlNet = 1; // default value - GearPhysicalMeasurement gpmTrawlNet = measurementService.getGearPhysicalMeasurement(gearPhysicalFeatures, enumeration.PMFM_ID_MULTIRIG_NUMBER); - if (gpmTrawlNet != null && gpmTrawlNet.getNumericalValue() != null) { - trawlNet = gpmTrawlNet.getNumericalValue().intValue(); - } + // Retrieve multirig number, from Gear physical features + int cruiseMultirigCount = 1; // default value + GearPhysicalMeasurement gpmMultirigCount = measurementService.getGearPhysicalMeasurement(gearPhysicalFeatures, enumeration.PMFM_ID_MULTIRIG_NUMBER); + if (gpmMultirigCount != null && gpmMultirigCount.getNumericalValue() != null) { + cruiseMultirigCount = gpmMultirigCount.getNumericalValue().intValue(); + } // StationNumber if (copyIfNull && source.getStationNumber() == null) { @@ -606,16 +611,23 @@ } target.setName(nameBuffer.toString()); - // Trawl net number + // Multirig Aggregation if (copyIfNull && source.getMultirigAggregation() == null) { // Nothing to do : will be removed later, using notChangedGearUseMeasurements } else if (source.getMultirigAggregation() != null) { - // TODO BLA : Then parse the String and validate content -// if (source.getMultirigAggregation() > multirigNumber) { -// throw new DataIntegrityViolationException("An operation could not have a 'trawl net number' greater than 'trawl net' defined in the cruise."); -// } + if (source.getMultirigAggregation().matches("\\d+")) { + int mutlirigNumber = Integer.valueOf(source.getMultirigAggregation()); + if (mutlirigNumber > cruiseMultirigCount) { + throw new DataIntegrityViolationException("An operation could not have a 'multirig number' greater than 'multirig count' defined in the cruise."); + } + } + else { + // TODO BLA : Then parse the String when more than one number (ie "1,3") + // then and validate content + } + // Store into Gear Use Features - GearUseMeasurement gum = setGearUseMeasurement(scientificCruise, gearUseFeatures, enumeration.PMFM_ID_MULTIRIG_AGGREGATION, null, source.getMultirigAggregation().toString(), null); + GearUseMeasurement gum = setGearUseMeasurement(scientificCruise, gearUseFeatures, enumeration.PMFM_ID_MULTIRIG_AGGREGATION, null, source.getMultirigAggregation(), null); notChangedGearUseMeasurements.remove(gum); } @@ -1098,6 +1110,9 @@ } protected void setMeasurement(Measurement measurement, Caracteristic caracteristic, Serializable value) { + if (value == null) { + return; + } if (caracteristic.getCaracteristicType() == CaracteristicType.TEXT) { measurement.setAlphanumericalValue((String)value); } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java 2013-01-30 17:13:52 UTC (rev 272) @@ -24,17 +24,35 @@ * #L% */ +import com.google.common.base.Preconditions; import com.google.common.collect.Lists; + +import fr.ifremer.adagio.core.dao.administration.programStrategy.ProgramDao; +import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruiseDao; +import fr.ifremer.adagio.core.dao.referential.gear.GearClassificationImpl; +import fr.ifremer.adagio.core.dao.referential.location.Location; +import fr.ifremer.adagio.core.dao.referential.location.LocationDao; +import fr.ifremer.adagio.core.dao.referential.taxon.TaxonGroupTypeImpl; +import fr.ifremer.tutti.persistence.entities.data.CatchBatch; import fr.ifremer.tutti.persistence.entities.data.Program; import fr.ifremer.tutti.persistence.entities.referential.Zone; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; +import org.hibernate.type.IntegerType; import org.hibernate.type.StringType; +import org.springframework.beans.factory.annotation.Autowired; +import org.springframework.dao.DataIntegrityViolationException; +import org.springframework.dao.DataRetrievalFailureException; import org.springframework.stereotype.Service; +import java.util.Calendar; +import java.util.Date; +import java.util.GregorianCalendar; import java.util.Iterator; import java.util.List; +import javax.annotation.Resource; + /** * @author tchemit <chemit(a)codelutin.com> * @since 0.3 @@ -45,10 +63,27 @@ /** Logger. */ private static final Log log = LogFactory.getLog(ProgramPersistenceServiceImpl.class); + + @Autowired(required = true) + protected ReferentialPersistenceService referentialService; + @Resource(name = "programDao") + protected ProgramDao programDao; + + @Resource(name = "locationDao") + protected LocationDao locationDao; + + protected final int maxCodeLengthInDatabase = 40; + @Override public List<Program> getAllProgram() { - Iterator<Object[]> list = queryList("allPrograms"); + String codePattern = "%"; + if (enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX != null) { + codePattern = enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX + codePattern; + } + Iterator<Object[]> list = queryList("allPrograms", + "codePattern", StringType.INSTANCE, codePattern + ); List<Program> result = Lists.newArrayList(); while (list.hasNext()) { @@ -56,6 +91,7 @@ Program target = new Program(); target.setId((String) source[0]); target.setName((String) source[1]); + target.setComment((String) source[2]); result.add(target); } return result; @@ -72,6 +108,7 @@ Program result = new Program(); result.setId((String) source[0]); result.setName((String) source[1]); + result.setComment((String) source[2]); // get program locations Iterator<Object[]> list = queryList( @@ -96,11 +133,128 @@ @Override public Program createProgram(Program bean) { - throw new UnsupportedOperationException(); + Preconditions.checkNotNull(bean); + Preconditions.checkNotNull(bean.getName()); + Preconditions.checkArgument(bean.getId() == null); + + fr.ifremer.adagio.core.dao.administration.programStrategy.Program program = fr.ifremer.adagio.core.dao.administration.programStrategy.Program.Factory.newInstance(); + beanToEntity(bean, program, true); + program = programDao.create(program); + bean.setId(String.valueOf(program.getCode())); + + return bean; } @Override public Program saveProgram(Program bean) { - throw new UnsupportedOperationException(); + Preconditions.checkNotNull(bean); + Preconditions.checkNotNull(bean.getName()); + Preconditions.checkNotNull(bean.getId()); + + fr.ifremer.adagio.core.dao.administration.programStrategy.Program program = programDao.load(bean.getId()); + if (program == null) { + throw new DataRetrievalFailureException("Could not retrieve program with code=" + bean.getId()); + } + + beanToEntity(bean, program, true); + programDao.update(program); + + return bean; } + + // ------------------------------------------------------------------------// + // -- Internal methods --// + // ------------------------------------------------------------------------// + protected void beanToEntity(Program source, + fr.ifremer.adagio.core.dao.administration.programStrategy.Program target, + boolean copyIfNull) { + + // Code : compute with : <prefixe><name> + if (target.getCode() == null && source.getName() != null) { + // Compute a program code (remove spaces, and capitalize the name) + String programCode = source.getName().toUpperCase().replaceAll(" ", "_"); + // Add a prefix + if (enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX != null) { + programCode = enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX + programCode; + } + // Trunc the code if too long + if (programCode.length() > maxCodeLengthInDatabase) { + programCode = programCode.substring(0, maxCodeLengthInDatabase-1); + } + target.setCode(programCode); + + // Mandatory properties : + // Gear classification : + target.setGearClassification(load(GearClassificationImpl.class, enumeration.GEAR_CLASSIFICIATION_ID_SCIENTIFIC)); + + // taxon group type + target.setTaxonGroupType(load(TaxonGroupTypeImpl.class, enumeration.TAXON_GROUP_TYPE_ID_COMMERCIAL_SPECIES)); + + // Creation date + Calendar calendar = new GregorianCalendar(); + calendar.set(Calendar.HOUR_OF_DAY, 0); + calendar.set(Calendar.MINUTE, 0); + calendar.set(Calendar.SECOND, 0); + calendar.set(Calendar.MILLISECOND, 0); + target.setCreationDate(calendar.getTime()); + } + + // Name + if (copyIfNull && source.getName() == null) { + target.setName(null); + } else if (source.getName() != null) { + target.setName(source.getName()); + } + + // Description (=source.comment) + if (copyIfNull && source.getComment() == null) { + target.setDescription(null); + } else if (source.getComment() != null) { + target.setDescription(source.getComment()); + } + + + + + // Zone + if (copyIfNull && source.getZone() == null) { + // Remove program location classifications : + if (target.getLocationClassifications() != null) { + target.getLocationClassifications().clear(); + } + // Remove program locations : + if (target.getLocations() != null) { + target.getLocations().clear(); + } + } else if (source.getZone() != null && source.getZone().getId() != null) { + Location location = locationDao.load(Integer.valueOf(source.getZone().getId())); + + // Program location classifications : + if (target.getLocationClassifications() == null) { + target.setLocationClassifications(Lists.newArrayList(location.getLocationClassification())); + } + else { + target.getLocationClassifications().clear(); + target.getLocationClassifications().add(location.getLocationClassification()); + } + + // Program locations : + if (target.getLocations() == null) { + target.setLocations(Lists.newArrayList(location)); + } + else { + target.getLocations().clear(); + target.getLocations().add(location); + } + } + } + + public int getProgramNameMaxLength() { + int maxCodeLengthInDatabase = 40; + if (enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX == null + || enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX.trim().isEmpty()) { + return maxCodeLengthInDatabase; + } + return (maxCodeLengthInDatabase - enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX.length()); + } } Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2013-01-30 17:13:52 UTC (rev 272) @@ -46,9 +46,11 @@ import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.hibernate.Query; +import org.hibernate.type.BooleanType; import org.hibernate.type.DateType; import org.hibernate.type.IntegerType; import org.hibernate.type.StringType; +import org.springframework.cache.annotation.Cacheable; import org.springframework.stereotype.Service; import javax.annotation.Resource; @@ -122,7 +124,8 @@ @Override public List<FishingOperationLocation> getAllFishingOperationStrata(String zoneId) { - List<FishingOperationLocation> result = getFishingOperationLocations( + Preconditions.checkNotNull(zoneId); + List<FishingOperationLocation> result = getFishingOperationLocationsByParent( enumeration.LOCATION_LEVEL_ID_STRATA, Integer.valueOf(zoneId), enumeration.LOCATION_LEVEL_ID_PROGRAM); @@ -150,7 +153,7 @@ } Preconditions.checkNotNull(parentId); - List<FishingOperationLocation> result = getFishingOperationLocations( + List<FishingOperationLocation> result = getFishingOperationLocationsByParent( enumeration.LOCATION_LEVEL_ID_SUB_STRATA, Integer.valueOf(parentId), parentLocationLevelId); @@ -185,7 +188,7 @@ } Preconditions.checkNotNull(parentId); - List<FishingOperationLocation> result = getFishingOperationLocations( + List<FishingOperationLocation> result = getFishingOperationLocationsByParent( enumeration.LOCATION_LEVEL_ID_LOCALITE, Integer.valueOf(parentId), parentLocationLevelId); @@ -210,11 +213,13 @@ } @Override + @Cacheable(value = "allFishingVessel") public List<Vessel> getAllFishingVessel() { Iterator<Object[]> list = queryListWithStatus( - "allVessels", + "allVessels", "refDate", DateType.INSTANCE, new Date(), - "vesselTypeId", IntegerType.INSTANCE, enumeration.VESSEL_TYPE_ID_FISHING); + "vesselTypeId", IntegerType.INSTANCE, enumeration.VESSEL_TYPE_ID_FISHING + ); List<Vessel> result = Lists.newArrayList(); while (list.hasNext()) { @@ -452,9 +457,31 @@ //-- Internal methods --// //------------------------------------------------------------------------// - protected List<FishingOperationLocation> getFishingOperationLocations(Integer locationLevelId, Integer parentId, Integer parentLocationLevelId) { + protected List<FishingOperationLocation> getFishingOperationLocations(Integer locationLevelId) { Iterator<Object[]> sources = queryListWithStatus( "allFishingOperationLocation", + "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_SECTOR, + "locationLevelId", IntegerType.INSTANCE, locationLevelId + ); + List<FishingOperationLocation> result = Lists.newArrayList(); + while (sources.hasNext()) { + Object[] source = sources.next(); + FishingOperationLocation target = new FishingOperationLocation(); + target.setId(String.valueOf(source[0])); + target.setLabel((String) source[1]); + target.setName((String) source[2]); +// target.setDescription((String)source[3]); + target.setLocationLevel((Integer) source[3]); + + setStatus((fr.ifremer.adagio.core.dao.referential.Status) source[4], target); + result.add(target); + } + return result; + } + + protected List<FishingOperationLocation> getFishingOperationLocationsByParent(Integer locationLevelId, Integer parentId, Integer parentLocationLevelId) { + Iterator<Object[]> sources = queryListWithStatus( + "allFishingOperationLocationByParent", "parentId", IntegerType.INSTANCE, parentId, "parentLocationLevelId", IntegerType.INSTANCE, parentLocationLevelId, "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_SECTOR, @@ -474,7 +501,7 @@ result.add(target); } return result; - } + } protected Caracteristic loadCaracteristic(Object[] source) { @@ -555,7 +582,7 @@ setStatus((fr.ifremer.adagio.core.dao.referential.Status) source[3], result); return result; } - + protected Iterator<Object[]> queryListWithStatus(String queryName, Object... params) { Query query = createQuery(queryName, params); Modified: trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java =================================================================== --- trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java 2013-01-30 17:13:52 UTC (rev 272) @@ -166,6 +166,12 @@ @Value("${PmfmId.AGE}") public final Integer PMFM_ID_AGE = null; + + @Value("${ProgramCode.SCIENTIFIC_CRUISE_PREFIX}") + public final String PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX = null; + + @Value("${TaxonGroupTypeCode.COMMERCIAL_SPECIES}") + public final String TAXON_GROUP_TYPE_ID_COMMERCIAL_SPECIES = null; public void init() { Modified: trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/resources/queries-override.hbm.xml 2013-01-30 17:13:52 UTC (rev 272) @@ -36,11 +36,12 @@ <![CDATA[ SELECT p.code, - p.name + p.name, + p.description FROM ProgramImpl p WHERE - p.code LIKE 'CAM-%' + p.code LIKE :codePattern ]]> </query> @@ -171,8 +172,8 @@ o.name AS name, guf.gear.label AS gearLabel, o.startDateTime AS startDateTime, - (select vum.alphanumericalValue from VesselUseMeasurementImpl vum where vum.vesselUseFeatures.id = vuf.id and vum.pmfm.id=1243) AS stationNumber, - (select gum.numericalValue from GearUseMeasurementImpl gum where gum.gearUseFeatures.id = guf.id and gum.pmfm.id=953) AS trawNetNumber + (select vum.alphanumericalValue from VesselUseMeasurementImpl vum where vum.vesselUseFeatures.id = vuf.id and vum.pmfm.id=:pmfmIdStationNumber) AS stationNumber, + (select gum.numericalValue from GearUseMeasurementImpl gum where gum.gearUseFeatures.id = guf.id and gum.pmfm.id=:pmfmIdMultirigAggregation) AS trawNetNumber FROM FishingOperationImpl o LEFT OUTER JOIN o.gearUseFeatures guf @@ -183,6 +184,8 @@ o.startDateTime ]]> <query-param name="cruiseId" type="java.lang.Integer"/> + <query-param name="pmfmIdStationNumber" type="java.lang.Integer"/> + <query-param name="pmfmIdMultirigAggregation" type="java.lang.Integer"/> </query> <query cacheable="true" name="fishingOperation"> @@ -449,7 +452,7 @@ </query>  - <query cacheable="true" name="allFishingOperationLocation"> + <query cacheable="true" name="allFishingOperationLocationByParent"> <![CDATA[ SELECT l.id as locationId, @@ -475,6 +478,27 @@ <query-param name="statusValidCode" type="java.lang.String"/> <query-param name="statusTemporaryCode" type="java.lang.String"/> </query> + + <query cacheable="true" name="allFishingOperationLocation"> + <![CDATA[ + SELECT + l.id as locationId, + l.label as locationLabel, + l.name as locationName, + l.locationLevel.id as locationLevelId, + l.status as status + FROM + LocationImpl l + WHERE + l.status.code IN (:statusValidCode, :statusTemporaryCode) + AND l.locationLevel.id = :locationLevelId + AND l.locationClassification.id = :locationClassificationId + ]]> + <query-param name="locationLevelId" type="java.lang.Integer"/> + <query-param name="locationClassificationId" type="java.lang.Integer"/> + <query-param name="statusValidCode" type="java.lang.String"/> + <query-param name="statusTemporaryCode" type="java.lang.String"/> + </query>  <query cacheable="true" name="allVessels"> Modified: trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties =================================================================== --- trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/main/resources/tutti-db-enumerations.properties 2013-01-30 17:13:52 UTC (rev 272) @@ -359,3 +359,6 @@ #TODO A creer (dans les enumerations Allegro) # 181=PDG-RBE (à confirmer par Vincent) DepartmentId.UNKNOWN_RECORDER_DEPARTMENT=181 + +#TODO A creer (dans les enumerations Allegro) +ProgramCode.SCIENTIFIC_CRUISE_PREFIX=CAM- \ No newline at end of file Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceTest.java 2013-01-30 17:13:52 UTC (rev 272) @@ -191,7 +191,7 @@ fishingOperation.setComment(null); // Store fishing operation into database : - /*createdFishingOperation = service.createFishingOperation(fishingOperation); + createdFishingOperation = service.createFishingOperation(fishingOperation); assertNotNull("Fishing operation ID must not be null after creation in database", createdFishingOperation); assertNotNull(createdFishingOperation.getId()); @@ -199,7 +199,6 @@ reloadedFishingOperation = service.getFishingOperation(createdFishingOperation.getId()); assertNotNull(reloadedFishingOperation); assertNull(reloadedFishingOperation.getGearShootingStartDate()); - */ // ----------------------------------------------------------------------------- // 2. Test with all properties set @@ -312,7 +311,7 @@ // ----------------------------------------------------------------------------- // 4. Test exceptions : // - try to save a operation using a gear not declared in the cruise - // - try to save a operation using a trawl net number bigger than the cruise trawl net + // - try to save a operation using a multirig aggregation greater than the cruise multirig number // ----------------------------------------------------------------------------- fishingOperation.setId(null); @@ -327,25 +326,24 @@ } } - //TODO TC : remove comment when adagio will build -// try { -// createdFishingOperation = service.createFishingOperation(fishingOperation); -// fail("A fishing operation must not be saved if the gear is not declared in the cruise."); -// } -// catch(DataIntegrityViolationException dive) { -// assertNotNull(dive); -// fishingOperation.setGear(cruiseGear); -// } + try { + createdFishingOperation = service.createFishingOperation(fishingOperation); + fail("A fishing operation must not be saved if the gear is not declared in the cruise."); + } + catch(DataIntegrityViolationException dive) { + assertNotNull(dive); + fishingOperation.setGear(cruiseGear); + } -// fishingOperation.setMultirigAggregation("3"); -// try { -// createdFishingOperation = service.createFishingOperation(fishingOperation); -// fail("A fishing operation must not be saved if the 'trawl net number' > 'cruise trawl net'."); -// } -// catch(DataIntegrityViolationException dive) { -// assertNotNull(dive); -// fishingOperation.setMultirigAggregation("1"); -// } + fishingOperation.setMultirigAggregation("3"); + try { + createdFishingOperation = service.createFishingOperation(fishingOperation); + fail("A fishing operation must not be saved if the 'multirig aggregation' > 'cruise multirig number'."); + } + catch(DataIntegrityViolationException dive) { + assertNotNull(dive); + fishingOperation.setMultirigAggregation("1"); + } // ----------------------------------------------------------------------------- // 5. Test update (delete unecessary data) Modified: trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceTest.java =================================================================== --- trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceTest.java 2013-01-30 15:26:14 UTC (rev 271) +++ trunk/tutti-persistence-adagio/src/test/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceTest.java 2013-01-30 17:13:52 UTC (rev 272) @@ -24,16 +24,22 @@ * #L% */ +import static org.junit.Assert.*; import fr.ifremer.tutti.persistence.DatabaseResource; import fr.ifremer.tutti.persistence.entities.data.Program; +import fr.ifremer.tutti.persistence.entities.referential.Zone; + import org.junit.Assert; import org.junit.Before; import org.junit.ClassRule; import org.junit.Ignore; import org.junit.Test; +import java.util.Iterator; import java.util.List; +import javax.annotation.Resource; + /** * @author tchemit <chemit(a)codelutin.com> * @since 0.3 @@ -42,19 +48,27 @@ @ClassRule public static final DatabaseResource dbResource = new DatabaseResource(); - + protected ProgramPersistenceService service; + protected ReferentialPersistenceService referentialService; @Before public void setUp() throws Exception { service = TuttiPersistenceServiceLocator.getProgramPersistenceService(); + referentialService = TuttiPersistenceServiceLocator.getReferentialPersistenceService(); } @Test public void getAllProgram() { List<Program> result = service.getAllProgram(); Assert.assertNotNull(result); - Assert.assertEquals(1, result.size()); + Assert.assertTrue("More than one program must be found", result.size() > 0); + for (Iterator iterator = result.iterator(); iterator.hasNext();) { + Program program = (Program) iterator.next(); + Assert.assertNotNull(program.getId()); + Assert.assertNotEquals("SIH-OBSMER", program.getId()); + Assert.assertNotEquals("SIH-ACTIFLOT", program.getId()); + } } @Test @@ -69,14 +83,55 @@ } @Test - @Ignore - public void createProgram(/*Program bean*/) { + public void createAndSaveProgram(/*Program bean*/) { + List<Zone> zones = referentialService.getAllProgramZone(); + assertNotNull(zones); + assertTrue(zones.size() > 0); + + Program program = new Program(); + String name = "UniTest" + System.currentTimeMillis(); + if (name.length() > 40) { + name = name.substring(0, 39); + } + program.setName(name); + + program.setComment("Comments on " + name); + program.setZone(zones.get(0)); + + // Create program + Program createdProgram = service.createProgram(program); + assertNotNull(createdProgram); + assertNotNull(createdProgram.getId()); + + // Reload program and compare + Program reloadedProgram = service.getProgram(createdProgram.getId()); + assertNotNull(reloadedProgram); + assertEquals(createdProgram.getId(), reloadedProgram.getId()); + assertEquals(program.getName(), reloadedProgram.getName()); + assertEquals(program.getComment(), reloadedProgram.getComment()); + assertNotNull(program.getZone()); + assertEquals(program.getZone().getId(), reloadedProgram.getZone().getId()); + + // Modify program + program.setId(createdProgram.getId()); + program.setName("NEW_NAME"); + program.setComment(program.getComment() + "\nAdd some modification"); + program.setZone(zones.get(1)); + + // Create program + Program savedProgram = service.saveProgram(program); + assertNotNull(savedProgram); + assertNotNull(savedProgram.getId()); + + // Reload program and compare + reloadedProgram = service.getProgram(savedProgram.getId()); + assertNotNull(reloadedProgram); + assertEquals(program.getId(), reloadedProgram.getId()); + assertEquals(program.getName(), reloadedProgram.getName()); + assertEquals(program.getComment(), reloadedProgram.getComment()); + assertNotNull(program.getZone()); + assertEquals(program.getZone().getId(), reloadedProgram.getZone().getId()); } - @Test - @Ignore - public void saveProgram(/*Program bean*/) { - - } }

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