Author: tchemit Date: 2014-05-15 18:25:26 +0200 (Thu, 15 May 2014) New Revision: 1784 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1784 Log: refs #5079 (report from version 3.4.3) Added: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceAno5079Test.java trunk/tutti-service/src/test/resources/pupitri/ano-5079.car trunk/tutti-service/src/test/resources/pupitri/ano-5079.tnk trunk/tutti-service/src/test/resources/pupitri/ano-5079.tuttiProtocol Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportResult.java Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportResult.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportResult.java 2014-05-15 16:24:29 UTC (rev 1783) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportResult.java 2014-05-15 16:25:26 UTC (rev 1784) @@ -252,7 +252,7 @@ float melagRatio = 1f; if (useMelag) { - melagRatio = melagSortedWeight.floatValue() * melagTotalWeight.floatValue(); + melagRatio = melagSortedWeight.floatValue() / melagTotalWeight.floatValue(); } Iterator<PupitriCatch> iterator = catches.iterator(); Added: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceAno5079Test.java =================================================================== --- trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceAno5079Test.java (rev 0) +++ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceAno5079Test.java 2014-05-15 16:25:26 UTC (rev 1784) @@ -0,0 +1,162 @@ +package fr.ifremer.tutti.service.pupitri; + +/* + * #%L + * Tutti :: Service + * $Id$ + * $HeadURL: https://svn.codelutin.com/tutti/branches/3.3.6/tutti-service/src/test/java/f... $ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.google.common.collect.Lists; +import com.google.common.collect.Sets; +import fr.ifremer.tutti.TuttiConfigurationOption; +import fr.ifremer.tutti.persistence.entities.data.BatchContainer; +import fr.ifremer.tutti.persistence.entities.data.CatchBatch; +import fr.ifremer.tutti.persistence.entities.data.FishingOperation; +import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; +import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocol; +import fr.ifremer.tutti.persistence.entities.referential.Species; +import fr.ifremer.tutti.persistence.entities.referential.SpeciesBean; +import fr.ifremer.tutti.service.DecoratorService; +import fr.ifremer.tutti.service.PersistenceService; +import fr.ifremer.tutti.service.ServiceDbResource; +import fr.ifremer.tutti.service.TuttiServiceContext; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.junit.Assert; +import org.junit.Before; +import org.junit.ClassRule; +import org.junit.Test; +import org.nuiton.decorator.Decorator; + +import java.io.File; +import java.io.IOException; +import java.util.List; +import java.util.Set; + +/** + * @author tchemit <chemit@codelutin.com> + * @since 3.0-rc-2 + */ +public class PupitriImportServiceAno5079Test { + + /** Logger. */ + private static final Log log = LogFactory.getLog(PupitriImportServiceAno5079Test.class); + + @ClassRule + public static final ServiceDbResource dbResource = + ServiceDbResource.writeDb("dbExport"); + + public static final String PROGRAM_ID = "CAM-TEST_ELEVATION"; + + public static final String CRUISE_ID = "100003"; + + public static final String OPERATION_1_ID = "100112"; + + public static final String OPERATION_2_ID = "100113"; + + public static final String OPERATION_3_ID = "100115"; + + protected PupitriImportExportService service; + + protected PersistenceService persistenceService; + + protected DecoratorService decoratorService; + + protected ServiceDbResource.DataContext dataContext; + + @Before + public void setUp() throws Exception { + + TuttiServiceContext serviceContext = dbResource.getServiceContext(); + + persistenceService = serviceContext.getService(PersistenceService.class); + + decoratorService = serviceContext.getService(DecoratorService.class); + + dbResource.openDataContext(); + + service = serviceContext.getService(PupitriImportExportService.class); + + dataContext = dbResource.loadContext(PROGRAM_ID, CRUISE_ID, 3, + OPERATION_2_ID, + OPERATION_1_ID, + OPERATION_3_ID); + } + + @Test + public void importPupitri() throws IOException { + + // Import MELA-NGE species + SpeciesBean melagSpecies = new SpeciesBean(); + melagSpecies.setName("MELA-NGE"); + List<Species> specieses = persistenceService.importTemporarySpecies(Lists.<Species>newArrayList(melagSpecies)); + specieses.get(0).setRefTaxCode(melagSpecies.getName()); + + File trunk = dbResource.copyClassPathResource("pupitri/ano-5079.tnk", "pupitri.tnk"); + File carroussel = dbResource.copyClassPathResource("pupitri/ano-5079.car", "pupitri.car"); + File protocol = dbResource.copyClassPathResource("pupitri/ano-5079.tuttiProtocol", "ano-5079.tuttiProtocol"); + dbResource.getConfig().getApplicationConfig().setOption(TuttiConfigurationOption.DB_PROTOCOL_DIRECTORY.getKey(), protocol.getParentFile().getAbsolutePath()); + TuttiProtocol protocol1 = persistenceService.getProtocol("ano-5079"); + persistenceService.setProtocol(protocol1); + + FishingOperation operation = dataContext.operations.get(1); + CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); + catchBatch.setFishingOperation(operation); + + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); + Assert.assertEquals(3, rootSpeciesBatch.sizeChildren()); + int nbNotAdded = service.importPupitri(trunk, carroussel, operation, catchBatch).getNbCarrousselNotImported(); + Assert.assertEquals(0, nbNotAdded); + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); + Assert.assertEquals(5, rootSpeciesBatchAfter.sizeChildren()); + + Set<Integer> unexpectedSpecies = Sets.newHashSet( + ); + Set<Integer> expectedSpecies = Sets.newHashSet( + 15948, // ALLO-TEZ + 30902, // TRIG-LUC + 17374, // EUTR-GUR + 16816, // ENGR-ENC + 17116 // TRAC-TRU + ); + + Decorator<Species> speciesDecorator = decoratorService.getDecoratorByType(Species.class); + + for (SpeciesBatch speciesBatch : rootSpeciesBatchAfter.getChildren()) { + + Species species = speciesBatch.getSpecies(); + Integer speciesId = species.getIdAsInt(); + boolean remove = expectedSpecies.remove(speciesId); + if (log.isInfoEnabled()) { + log.info("Species : " + speciesId + " : " + speciesDecorator.toString(species)); + } + if (!remove) { + unexpectedSpecies.add(speciesId); + if (log.isWarnEnabled()) { + log.warn("Unexpected Species " + speciesId); + } + } + } + + Assert.assertTrue("Expected species not found: " + expectedSpecies, expectedSpecies.isEmpty()); + Assert.assertTrue("Unexpected species found: " + unexpectedSpecies, unexpectedSpecies.isEmpty()); + } +} Property changes on: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceAno5079Test.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision Added: svn:eol-style + native Added: trunk/tutti-service/src/test/resources/pupitri/ano-5079.car =================================================================== --- trunk/tutti-service/src/test/resources/pupitri/ano-5079.car (rev 0) +++ trunk/tutti-service/src/test/resources/pupitri/ano-5079.car 2014-05-15 16:25:26 UTC (rev 1784) @@ -0,0 +1,14 @@ +$TSMES,27/11/13,07:58:47.624,BLCAR, 0,A,1,002,ALLO-TEZ,T,VAT,2.0, +$TSMES,27/11/13,08:09:31.330,BLCAR, 0,A,1,002,ALLO-TEZ,T,VAT,2.0, +$TSMES,27/11/13,08:10:04.519,BLCAR, 0,A,1,002,ALLO-TEZ,T,VAT,6.0, +$TSMES,27/11/13,08:10:26.922,BLCAR, 0,A,1,002,MELA-NGE,0,VAT,30.0, +$TSMES,27/11/13,08:10:52.724,BLCAR, 0,A,1,001,MELA-NGE,0,VAT,10.0, +$TSMES,27/11/13,08:12:08.170,BLCAR, 0,A,1,001,MELA-NGE,0,VAT,60.0, +$TSMES,27/11/13,08:13:05.607,BLCAR, 0,A,1,001,TRIG-LUC,G,VAT,2.5, +$TSMES,27/11/13,08:13:25.383,BLCAR, 0,A,1,001,TRIG-LUC,P,VAT,1.2, +$TSMES,27/11/13,08:13:57.072,BLCAR, 0,A,1,001,ENGR-ENC,0,VAT,6.5, +$TSMES,27/11/13,08:13:57.072,BLCAR, 0,A,1,001,ENGR-ENC,0,VAT,1.3, +$TSMES,27/11/13,08:10:26.922,BLCAR, 0,A,1,002,TRAC-TRU,H,VAT,200.0, +$TSMES,27/11/13,07:58:47.624,BLCAR, 0,A,1,002,EUTR-GUR,T,VAT,14.0, +$TSMES,27/11/13,08:09:31.330,BLCAR, 0,A,1,002,EUTR-GUR,T,VAT,4.0, +$TSMES,27/11/13,08:10:04.519,BLCAR, 0,A,1,002,EUTR-GUR,T,VAT,2.0, Added: trunk/tutti-service/src/test/resources/pupitri/ano-5079.tnk =================================================================== --- trunk/tutti-service/src/test/resources/pupitri/ano-5079.tnk (rev 0) +++ trunk/tutti-service/src/test/resources/pupitri/ano-5079.tnk 2014-05-15 16:25:26 UTC (rev 1784) @@ -0,0 +1,5 @@ +$TSMES,27/11/13,07:51:44.085,BLTNK, 0,A,1,VAT,0024.0, +$TSMES,27/11/13,07:57:15.228,BLTNK, 0,A,1,VAT,0011.0, +$TSMES,27/11/13,08:00:23.810,BLTNK, 0,A,1,VAT,0019.0, +$TSMES,27/11/13,08:01:30.046,BLTNK, 0,A,1,VAT,0006.0, +$TSMES,27/11/13,08:01:30.046,BLTNK, 0,A,1,VNT,800, Added: trunk/tutti-service/src/test/resources/pupitri/ano-5079.tuttiProtocol =================================================================== --- trunk/tutti-service/src/test/resources/pupitri/ano-5079.tuttiProtocol (rev 0) +++ trunk/tutti-service/src/test/resources/pupitri/ano-5079.tuttiProtocol 2014-05-15 16:25:26 UTC (rev 1784) @@ -0,0 +1,2691 @@ +id: 1dfc60e5-089f-4aea-bb87-27ed66e507a2 +name: protocole PELGAS 2014 version du 17042014 +benthos: +- !SpeciesProtocol + id: 989a5b5a-9f10-43e4-a1c2-34a1337e1d49 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 7 + speciesSurveyCode: MBPORIF + weightEnabled: true +- !SpeciesProtocol + id: 84626f0e-3790-40c0-a98c-b862cbdbef8e + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 6129 + speciesSurveyCode: AXININF + weightEnabled: true +- !SpeciesProtocol + id: ff16ccda-ce86-49e1-b4a6-ddf419d3d7a3 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4656 + speciesSurveyCode: SUBEFIC + weightEnabled: true +- !SpeciesProtocol + id: 76cbc9d3-88ea-41f5-97b1-a17e1c491cf6 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 12027 + speciesSurveyCode: DESMFRU + weightEnabled: true +- !SpeciesProtocol + id: 6213f6f6-4ac3-409a-98eb-7830acd6c268 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 12 + speciesSurveyCode: CLHYDRZ + weightEnabled: true +- !SpeciesProtocol + id: 28ff5808-f01b-4157-b826-8b35879600ec + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4622 + speciesSurveyCode: ABIEABI + weightEnabled: true +- !SpeciesProtocol + id: 216ad594-12de-4e12-bf5e-2fb8db613f29 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4685 + speciesSurveyCode: HYDAFAL + weightEnabled: true +- !SpeciesProtocol + id: c3533411-cf9d-4b13-85e8-362fd5bcf1eb + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4682 + speciesSurveyCode: NEMEANT + weightEnabled: true +- !SpeciesProtocol + id: 65b0845d-8928-46fc-8839-c6d58ef0bfc7 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4667 + speciesSurveyCode: NEMERAM + weightEnabled: true +- !SpeciesProtocol + id: caaf8a03-e3d8-49f4-8521-0fab642816d1 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4736 + speciesSurveyCode: HLECHAL + weightEnabled: true +- !SpeciesProtocol + id: 03025db8-5a34-4eda-982e-d5b715b5edce + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 131 + speciesSurveyCode: CLANTHO + weightEnabled: true +- !SpeciesProtocol + id: 2488e3b8-9dbb-40fa-a925-93013374673e + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4386 + speciesSurveyCode: ALCYGLO + weightEnabled: true +- !SpeciesProtocol + id: 5506c164-e8e5-40f9-8a42-56f8c578b62e + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3021 + speciesSurveyCode: ALCYDIG + weightEnabled: true +- !SpeciesProtocol + id: e5443772-9d8e-497d-9605-4e2acb83d252 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 6804 + speciesSurveyCode: FUNIQUA + weightEnabled: true +- !SpeciesProtocol + id: 3f75c3c9-24da-4412-ac7d-cfbc7ffdb2b4 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3949 + speciesSurveyCode: VERE + weightEnabled: true +- !SpeciesProtocol + id: 8a874879-2b21-4be1-8925-e8007d363ec3 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 134 + speciesSurveyCode: PENNPHO + weightEnabled: true +- !SpeciesProtocol + id: 44a48069-67e8-4827-9178-0e3a9f0b96b8 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3006 + speciesSurveyCode: PRTOGRI + weightEnabled: true +- !SpeciesProtocol + id: 5609d619-09f1-48fe-a5df-f51333804f3d + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 2224 + speciesSurveyCode: ORACTIN + weightEnabled: true +- !SpeciesProtocol + id: cc4616a8-03b7-47a1-84e4-a8d6378e4423 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4734 + speciesSurveyCode: URTIEQU + weightEnabled: true +- !SpeciesProtocol + id: 55675280-da2e-4375-885c-2591c6495aa0 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4623 + speciesSurveyCode: ACTU + weightEnabled: true +- !SpeciesProtocol + id: 27ecbf57-3c4c-419d-a152-5fa4624f89a8 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4626 + speciesSurveyCode: ADAMCAR + weightEnabled: true +- !SpeciesProtocol + id: 5f7dda22-ba51-45ca-9202-76b0a74cc34f + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4378 + speciesSurveyCode: CLLCPAR + weightEnabled: true +- !SpeciesProtocol + id: ba26fe28-d876-45f9-a577-7ebe16ecb1c8 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4412 + speciesSurveyCode: METRSEN + weightEnabled: true +- !SpeciesProtocol + id: cdd5cc10-9c0f-49ac-b841-1fdb457d3f57 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4731 + speciesSurveyCode: ORSCLER + weightEnabled: true +- !SpeciesProtocol + id: cdf1e0e9-006e-4817-8eb9-4403110a357c + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4385 + speciesSurveyCode: CARYSMI + weightEnabled: true +- !SpeciesProtocol + id: dfe809c2-ebd8-466b-b882-74b98847a7b1 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 7230 + speciesSurveyCode: MADROCU + weightEnabled: true +- !SpeciesProtocol + id: 989aacda-23ab-4c58-a4f5-582643954cee + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4418 + speciesSurveyCode: EPZAINC + weightEnabled: true +- !SpeciesProtocol + id: a728eb38-8612-4dcb-8cb1-4319a5ee1f3d + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 7327 + speciesSurveyCode: EPZAPAG + weightEnabled: true +- !SpeciesProtocol + id: af9dee2e-4517-451a-b571-80c121bd39be + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 142 + speciesSurveyCode: MBNEMRT + weightEnabled: true +- !SpeciesProtocol + id: 65c9f56a-2781-4619-a02f-eb0bedb632a5 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 145 + speciesSurveyCode: MBSIPUN + weightEnabled: true +- !SpeciesProtocol + id: f8f43e6a-e46e-4622-930d-871bafaad772 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 147 + speciesSurveyCode: SIPUNUD + weightEnabled: true +- !SpeciesProtocol + id: e66d505a-5f0e-4cab-b231-df3e032accb2 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 150 + speciesSurveyCode: MBANNEL + weightEnabled: true +- !SpeciesProtocol + id: 37efa1ad-d3a1-4f9e-96f9-c93e072af47a + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 155 + speciesSurveyCode: APHRACU + weightEnabled: true +- !SpeciesProtocol + id: 59f5d30c-99a2-4228-9cb2-c130a7c76d50 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4298 + speciesSurveyCode: LAET + weightEnabled: true +- !SpeciesProtocol + id: 82fde4c9-5f35-4cf4-84e0-799c7456b2a1 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3240 + speciesSurveyCode: DIOPNEA + weightEnabled: true +- !SpeciesProtocol + id: 6aacf530-df90-4a4d-81e4-a9c524480fcb + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3241 + speciesSurveyCode: HYALTUB + weightEnabled: true +- !SpeciesProtocol + id: bbb3d4f7-858a-451f-bde3-57a30744e222 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 7125 + speciesSurveyCode: FMCHAEO + weightEnabled: true +- !SpeciesProtocol + id: 9ce7e309-c466-4468-a96b-4c67785e5579 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 211 + speciesSurveyCode: STERSCU + weightEnabled: true +- !SpeciesProtocol + id: d3966eb6-ea5a-4d98-be32-e66638e6e1d8 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 156 + speciesSurveyCode: OWENFUS + weightEnabled: true +- !SpeciesProtocol + id: fd94c664-eb35-4db1-9bd1-f126a9d05cb5 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 203 + speciesSurveyCode: LANICON + weightEnabled: true +- !SpeciesProtocol + id: 6e0ebaa6-771e-47d9-a3ef-319916c719c1 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3032 + speciesSurveyCode: FMSABED + weightEnabled: true +- !SpeciesProtocol + id: 25d9896e-8cd5-4dc2-bd14-b105b1116058 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 209 + speciesSurveyCode: FMSERPU + weightEnabled: true +- !SpeciesProtocol + id: 2becd9d4-c5b4-4990-914e-f3086c2fd249 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 224 + speciesSurveyCode: MBBRYOZ + weightEnabled: true +- !SpeciesProtocol + id: 82aae651-83bd-48bd-8526-5a409a53fb20 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 6222 + speciesSurveyCode: FMPHIDO + weightEnabled: true +- !SpeciesProtocol + id: f0106aab-f9b5-4827-aa50-9d531298d0a0 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 6669 + speciesSurveyCode: PENPFAS + weightEnabled: true +- !SpeciesProtocol + id: 002430a1-3473-4099-b658-b52becf8ec21 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4762 + speciesSurveyCode: CELL + weightEnabled: true +- !SpeciesProtocol + id: 3aee0e2d-ca54-445f-bf4e-0ed611f915e5 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3549 + speciesSurveyCode: FLUTFOL + weightEnabled: true +- !SpeciesProtocol + id: 81ca9c83-c83c-49ee-b444-71b6aa21e307 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 3974 + speciesSurveyCode: ALCD + weightEnabled: true +- !SpeciesProtocol + id: b7be7cbf-2d5e-4903-ae9f-a4914ae296c6 + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 4766 + speciesSurveyCode: PORECOM + weightEnabled: true +- !SpeciesProtocol + id: 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