[Isis-fish-users] Pb GC

29 Jan 2014


      une simu avec une vieille bonne petite base golfe de gascogne (1 seule 
pop en age!) qui plante pratiquement à la fin avec un pb de memoire ...
voici la fin du debug

INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>Exception in thread "SimThread 
sim_V4_ReferenceGdGLAng_EC2010_SSregle_10ans_2014-01-29-09-13" 
fr.ifremer.isisfish.simulator.SimulationException: Out of memory try 
with more memory (option -mx)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:433)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:265)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>Caused by: java.lang.OutOfMemoryError: GC overhead limit 
exceeded
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at java.nio.ByteBuffer.allocate(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at sun.nio.cs.StreamDecoder.<init>(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at sun.nio.cs.StreamDecoder.<init>(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
sun.nio.cs.StreamDecoder.forInputStreamReader(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at java.io.InputStreamReader.<init>(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at org.nuiton.util.FileUtil.getReader(FileUtil.java:441)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at org.nuiton.util.FileUtil.getReader(FileUtil.java:426)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
org.nuiton.util.FileUtil.readAsString(FileUtil.java:546)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.util.EvaluatorHelper.evaluate(EvaluatorHelper.java:148)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.entities.EquationImpl.evaluate(EquationImpl.java:85)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.entities.EquationImpl.evaluate(EquationImpl.java:113)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
sun.reflect.GeneratedMethodAccessor16.invoke(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at java.lang.reflect.Method.invoke(Unknown Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
org.hibernate.proxy.pojo.javassist.JavassistLazyInitializer.invoke(JavassistLazyInitializer.java:197)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.entities.EquationImpl_$$_javassist_19.evaluate(EquationImpl_$$_javassist_19.java) 

  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.entities.PopulationGroupImpl.getPrice(PopulationGroupImpl.java:146)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel.aw$original$_AW_$grossValueOfLandingsPerSpeciesPerStrategyMet$_AW_$scripts_GravityModel(GravityModel.java:513) 

  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel_1_829486577_1802245991___AW_JoinPoint.proceed(Unknown 
Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.util.Cache.realCall(Cache.java:204)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at fr.ifremer.isisfish.util.Cache.get(Cache.java:129)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.aspect.CacheAspect.call(CacheAspect.java:82)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel_1_829486577_1802245991___AW_JoinPoint.proceed(Unknown 
Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel_1_829486577_1802245991___AW_JoinPoint.invoke(Unknown Source) 

  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel.grossValueOfLandingsPerSpeciesPerStrategyMet(GravityModel.java)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel.aw$original$_AW_$grossValueOfLandingsPerStrategyMet$_AW_$scripts_GravityModel(GravityModel.java:606) 

  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel_1__1700666475_300087170___AW_JoinPoint.proceed(Unknown 
Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.util.Cache.realCall(Cache.java:204)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at fr.ifremer.isisfish.util.Cache.get(Cache.java:129)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
fr.ifremer.isisfish.aspect.CacheAspect.call(CacheAspect.java:82)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel_1__1700666475_300087170___AW_JoinPoint.proceed(Unknown 
Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus>    at 
scripts.GravityModel_1__1700666475_300087170___AW_JoinPoint.invoke(Unknown 
Source)
  INFO [Thread-14] (SubProcessSimulationLauncher.java:305) run - dans un 
sous processus> INFO [main] (DataStorage.java:209) getStorage - Create 
new storage for 
sim_V4_ReferenceGdGLAng_EC2010_SSregle_10ans_2014-01-29-09-13
  INFO [pool-2-thread-1] (SubProcessSimulationLauncher.java:254) 
subProcessSimulate - SubProcess finished (status = 0)
  INFO [pool-2-thread-1] (SimulationStorage.java:525) getSimulation - 
Try to open simulation 
sim_V4_ReferenceGdGLAng_EC2010_SSregle_10ans_2014-01-29-09-13(E:\ISISFish\isis-fish-4\isis-database\simulations\sim_V4_ReferenceGdGLAng_EC2010_SSregle_10ans_2014-01-29-09-13)
  INFO [monitor-thread] (SimulationControl.java:202) setText - Add 
economics results
  INFO [monitor-thread] (SimulationMonitor.java:478) 
waitAndCheckProgression - Job 
sim_V4_ReferenceGdGLAng_EC2010_SSregle_10ans_2014-01-29-09-13 finished
  INFO [monitor-thread] (SimulationMonitor.java:591) 
doPostSimulationOperation - Do post simulation operation for 
sim_V4_ReferenceGdGLAng_EC2010_SSregle_10ans_2014-01-29-09-13
  INFO [monitor-thread] (SimulationMonitor.java:409) simulationStop - 
Saving simulation 
sim_V4_ReferenceGdGLAng_EC2010_SSregle_10ans_2014-01-29-09-13 as stopped


merci
Stephanie
  ...................................................................... 
Stephanie MAHEVAS (Stephanie.Mahevas@ifremer.fr) IFREMER/EMH (Ecologie 
et Modèles pour l'Halieutique) Tel: (33) 2 40 37 41 81 Fax: (33) 2 40 37 
40 75 o \ o / _ o __| \ / |__ o _ \ o / o /|\ | /\ ___\o \o | o/ o/__ /\ 
| /|\ / \ / \ | \ /) | ( \ /o\ / ) | (\ / | / \ / \ 
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