[Tutti-commits] [tutti] 03/04: refs #5411 [CAPTURE] Import BIGFIN

This is an automated email from the git hooks/post-receive script. New commit to branch feature/importBigfin in repository tutti. See http://git.codelutin.com/tutti.git commit 7ea21c96d06c6fd52dd139d9a901e7004dd8feaf Author: Kevin Morin <morin@codelutin.com> Date: Wed Sep 3 17:49:38 2014 +0200 refs #5411 [CAPTURE] Import BIGFIN --- .../service/bigfin/BigfinImportServiceTest.java | 191 ++ .../test/resources/bigfin/importbigfin-invalid.csv | 31 + .../test/resources/bigfin/importbigfin-valid.csv | 31 + .../test/resources/bigfin/protocol.tuttiProtocol | 2426 ++++++++++++++++++++ 4 files changed, 2679 insertions(+) diff --git a/tutti-service/src/test/java/fr/ifremer/tutti/service/bigfin/BigfinImportServiceTest.java b/tutti-service/src/test/java/fr/ifremer/tutti/service/bigfin/BigfinImportServiceTest.java new file mode 100644 index 0000000..5db965b --- /dev/null +++ b/tutti-service/src/test/java/fr/ifremer/tutti/service/bigfin/BigfinImportServiceTest.java @@ -0,0 +1,191 @@ +package fr.ifremer.tutti.service.bigfin; + +import com.google.common.base.Predicate; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; +import fr.ifremer.tutti.TuttiConfigurationOption; +import fr.ifremer.tutti.persistence.ProgressionModel; +import fr.ifremer.tutti.persistence.entities.data.BatchContainer; +import fr.ifremer.tutti.persistence.entities.data.CatchBatch; +import fr.ifremer.tutti.persistence.entities.data.FishingOperation; +import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; +import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatchs; +import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; +import fr.ifremer.tutti.service.PersistenceService; +import fr.ifremer.tutti.service.ServiceDbResource; +import fr.ifremer.tutti.service.TuttiServiceContext; +import fr.ifremer.tutti.service.psionimport.PsionImportService; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.junit.Assert; +import org.junit.Before; +import org.junit.ClassRule; +import org.junit.Test; + +import java.io.File; +import java.io.IOException; +import java.util.List; + +/** + * @author Kevin Morin (Code Lutin) + * @since 3.8 + */ +public class BigfinImportServiceTest { + + @ClassRule + public static final ServiceDbResource dbResource = ServiceDbResource.writeDb("dbExport"); + + /** Logger. */ + private static final Log log = LogFactory.getLog(BigfinImportServiceTest.class); + + public static final String PROGRAM_ID = "CAM-TEST_ELEVATION"; + + public static final String CRUISE_ID = "100003"; + + public static final String OPERATION_1_ID = "100112"; + + public static final String OPERATION_2_ID = "100113"; + + public static final String OPERATION_3_ID = "100115"; + + protected BigfinImportService service; + + protected PersistenceService persistenceService; + + protected ServiceDbResource.DataContext dataContext; + + protected ProgressionModel progressionModel; + + protected File dataDirectory; + + protected Predicate<SpeciesAbleBatch> vracPredicate; + + @Before + public void setUp() throws Exception { + + dataDirectory = dbResource.getConfig().getDataDirectory(); + + TuttiServiceContext serviceContext = dbResource.getServiceContext(); + + File protocol = dbResource.copyClassPathResource("bigfin/protocol.tuttiProtocol", "protocol.tuttiProtocol"); + dbResource.getConfig().getApplicationConfig().setOption(TuttiConfigurationOption.DB_PROTOCOL_DIRECTORY.getKey(), protocol.getParentFile().getAbsolutePath()); + serviceContext.getDataContext().setProtocolId("protocol"); + + dbResource.openDataContext(); + + persistenceService = serviceContext.getService(PersistenceService.class); + service = serviceContext.getService(BigfinImportService.class); + + progressionModel = new ProgressionModel(); + progressionModel.setTotal(9); + + dataContext = dbResource.loadContext(PROGRAM_ID, CRUISE_ID, 3, OPERATION_2_ID, OPERATION_1_ID, OPERATION_3_ID); + + vracPredicate = SpeciesAbleBatchs.newSpeciesAbleBatchCategoryPredicate(PmfmId2.SORTED_UNSORTED.getValue(), QualitativeValueId.VRAC.getValue()); + } + + @Test + public void importValid() throws IOException { + + File importFile = dbResource.copyClassPathResource("bigfin/importbigfin-valid.csv", "importbigfin-valid.csv"); + + FishingOperation operation = dataContext.operations.get(1); + CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); + catchBatch.setFishingOperation(operation); + + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); + for (SpeciesBatch speciesBatch : rootSpeciesBatch.getChildren()) { + persistenceService.deleteSpeciesBatch(speciesBatch.getId()); + } + + BigfinImportResult importResult = service.importFile(importFile, operation, catchBatch); + + int nbSortedAdded = importResult.getNbSortedImported(); + int nbUnsortedAdded = importResult.getNbUnsortedImported(); + List<String> errors = importResult.getErrors(); + + if (log.isInfoEnabled()) { + log.info("Sorted Imported: " + nbSortedAdded); + log.info("Unsorted Imported: " + nbUnsortedAdded); + log.info("Errors: " + errors.size()); + } + + int nbNewSortedBatchs = 3; + int nbNewUnsortedBatchs = 0; + Assert.assertEquals(nbNewSortedBatchs, nbSortedAdded); + Assert.assertEquals(nbNewUnsortedBatchs, nbUnsortedAdded); + Assert.assertEquals(0, errors.size()); + + // no batch imported + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); + + int totalSortedBatchs = 0; + int totalUnsortedBatchs = 0; + for (SpeciesBatch speciesBatch : rootSpeciesBatchAfter.getChildren()) { + + boolean sorted = vracPredicate.apply(speciesBatch); + + if (sorted) { + totalSortedBatchs++; + } else { + totalUnsortedBatchs++; + } + } + + Assert.assertEquals(nbNewSortedBatchs, totalSortedBatchs); + Assert.assertEquals(nbNewUnsortedBatchs, totalUnsortedBatchs); + } + + @Test + public void importInvalid() throws IOException { + + File importFile = dbResource.copyClassPathResource("bigfin/importbigfin-invalid.csv", "importbigfin-invalid.csv"); + + FishingOperation operation = dataContext.operations.get(1); + CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); + catchBatch.setFishingOperation(operation); + + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); + for (SpeciesBatch speciesBatch : rootSpeciesBatch.getChildren()) { + persistenceService.deleteSpeciesBatch(speciesBatch.getId()); + } + + BigfinImportResult importResult = service.importFile(importFile, operation, catchBatch); + + int nbSortedAdded = importResult.getNbSortedImported(); + int nbUnsortedAdded = importResult.getNbUnsortedImported(); + List<String> errors = importResult.getErrors(); + + if (log.isInfoEnabled()) { + log.info("Sorted Imported: " + nbSortedAdded); + log.info("Unsorted Imported: " + nbUnsortedAdded); + log.info("Errors: " + errors.size()); + } + + int nbNewSortedBatchs = 0; + int nbNewUnsortedBatchs = 0; + int nbErrors = 3; + Assert.assertEquals(nbNewSortedBatchs, nbSortedAdded); + Assert.assertEquals(nbNewUnsortedBatchs, nbUnsortedAdded); + Assert.assertEquals(nbErrors, errors.size()); + + // no batch imported + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); + + int totalSortedBatchs = 0; + int totalUnsortedBatchs = 0; + for (SpeciesBatch speciesBatch : rootSpeciesBatchAfter.getChildren()) { + + boolean sorted = vracPredicate.apply(speciesBatch); + + if (sorted) { + totalSortedBatchs++; + } else { + totalUnsortedBatchs++; + } + } + + Assert.assertEquals(nbNewSortedBatchs, totalSortedBatchs); + Assert.assertEquals(nbNewUnsortedBatchs, totalUnsortedBatchs); + } +} diff --git a/tutti-service/src/test/resources/bigfin/importbigfin-invalid.csv b/tutti-service/src/test/resources/bigfin/importbigfin-invalid.csv new file mode 100644 index 0000000..4d5dabe --- /dev/null +++ b/tutti-service/src/test/resources/bigfin/importbigfin-invalid.csv @@ -0,0 +1,31 @@ +Record_id;length(mm);weight(g);species;cruise;station;pan;Dt;sz class;gender;text +0;98;250;ARISFOL;THALASSA;1;VB;05/31/14 20:20;42;Not set;libre +1;123;360;ARISFOL;THALASSA;1;VB;05/31/14 20:20;1;Not set; +2;185;215;ARISFOL;THALASSA;1;VB;05/31/14 20:20;1;Not set; +3;101;145;ARISFOL;THALASSA;1;VB;05/31/14 20:20;1;Not set; +5;90;256;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +6;131;258;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +7;168;365;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +8;165;324;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +9;136;124;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +10;145;241;ARISFOL;THALASSA;1;VB;05/31/14 20:21;2;Not set; +11;125;256;ARISFOL;THALASSA;1;VB;05/31/14 20:22;2;Not set; +12;650;0;ARITANT;THALASSA;1;VB;05/31/14 20:23;0;M; +13;654;0;ARITANT;THALASSA;1;VB;05/31/14 20:24;0;M; +14;521;0;ARITANT;THALASSA;1;VB;05/31/14 20:25;0;F; +15;587;0;ARITANT;THALASSA;1;VB;05/31/14 20:26;0;F; +16;456;0;ARITANT;THALASSA;1;VB;05/31/14 20:27;0;M; +17;562;0;ARITANT;THALASSA;1;VB;05/31/14 20:28;0;F; +18;562;0;ARITANT;THALASSA;1;VB;05/31/14 20:29;0;F; +19;125;1025;TRACTRU;THALASSA;1;VB;05/31/14 20:30;0;Not set; +20;145;0;TRACTRU;THALASSA;1;VB;05/31/14 20:31;0;Not set; +21;102;0;TRACTRU;THALASSA;1;VB;05/31/14 20:32;0;Not set; +22;96;0;TRACTRU;THALASSA;1;VB;05/31/14 20:33;0;Not set; +23;84;0;TRACTRU;THALASSA;1;VB;05/31/14 20:34;0;Not set; +24;84;0;TRACTRU;THALASSA;1;VB;05/31/14 20:35;0;Not set; +25;132;0;TRACTRU;THALASSA;1;VB;05/31/14 20:36;0;Not set; +26;105;0;TRACTRU;THALASSA;1;VB;05/31/14 20:37;0;Not set; +27;80;0;TRACTRU;THALASSA;1;VB;05/31/14 20:38;0;Not set; +28;96;0;TRACTRU;THALASSA;1;VB;05/31/14 20:39;0;Not set; +29;87;0;PAPELON;THALASSA;1;VB;05/31/14 20:40;0;Not set; +30;785;1240;DICE-LAB;THALASSA;1;VB;05/31/14 20:41;2;M; diff --git a/tutti-service/src/test/resources/bigfin/importbigfin-valid.csv b/tutti-service/src/test/resources/bigfin/importbigfin-valid.csv new file mode 100644 index 0000000..66cd72b --- /dev/null +++ b/tutti-service/src/test/resources/bigfin/importbigfin-valid.csv @@ -0,0 +1,31 @@ +Record_id;length(mm);weight(g);species;cruise;station;pan;Dt;sz class;gender;text +0;98;250;ARISFOL;THALASSA;1;VB;05/31/14 20:20;1;Not set;libre +1;123;360;ARISFOL;THALASSA;1;VB;05/31/14 20:20;1;Not set; +2;185;215;ARISFOL;THALASSA;1;VB;05/31/14 20:20;1;Not set; +3;101;145;ARISFOL;THALASSA;1;VB;05/31/14 20:20;1;Not set; +5;90;256;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +6;131;258;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +7;168;365;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +8;165;324;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +9;136;124;ARISFOL;THALASSA;1;VB;05/31/14 20:20;2;Not set; +10;145;241;ARISFOL;THALASSA;1;VB;05/31/14 20:21;2;Not set; +11;125;256;ARISFOL;THALASSA;1;VB;05/31/14 20:22;2;Not set; +12;650;0;ARITANT;THALASSA;1;VB;05/31/14 20:23;0;M; +13;654;0;ARITANT;THALASSA;1;VB;05/31/14 20:24;0;M; +14;521;0;ARITANT;THALASSA;1;VB;05/31/14 20:25;0;F; +15;587;0;ARITANT;THALASSA;1;VB;05/31/14 20:26;0;F; +16;456;0;ARITANT;THALASSA;1;VB;05/31/14 20:27;0;M; +17;562;0;ARITANT;THALASSA;1;VB;05/31/14 20:28;0;F; +18;562;0;ARITANT;THALASSA;1;VB;05/31/14 20:29;0;F; +19;125;1025;TRACTRU;THALASSA;;VB;05/31/14 20:30;0;Not set; +20;145;0;TRACTRU;THALASSA;;VB;05/31/14 20:31;0;Not set; +21;102;0;TRACTRU;THALASSA;;VB;05/31/14 20:32;0;Not set; +22;96;0;TRACTRU;THALASSA;;VB;05/31/14 20:33;0;Not set; +23;84;0;TRACTRU;THALASSA;;VB;05/31/14 20:34;0;Not set; +24;84;0;TRACTRU;THALASSA;;VB;05/31/14 20:35;0;Not set; +25;132;0;TRACTRU;THALASSA;;VB;05/31/14 20:36;0;Not set; +26;105;0;TRACTRU;THALASSA;;VB;05/31/14 20:37;0;Not set; +27;80;0;TRACTRU;THALASSA;;VB;05/31/14 20:38;0;Not set; +28;96;0;TRACTRU;THALASSA;;VB;05/31/14 20:39;0;Not set; +29;87;0;TRACTRU;THALASSA;;VB;05/31/14 20:40;0;Not set; +30;785;1240;DICE-LAB;THALASSA;1;VB;05/31/14 20:41;2;M; diff --git a/tutti-service/src/test/resources/bigfin/protocol.tuttiProtocol b/tutti-service/src/test/resources/bigfin/protocol.tuttiProtocol new file mode 100644 index 0000000..347653b --- /dev/null +++ b/tutti-service/src/test/resources/bigfin/protocol.tuttiProtocol @@ -0,0 +1,2426 @@ +id: 7a959cb1-2bf0-4876-8e20-ba0021c27835 +name: Protocole MEDITS +benthos: +- !SpeciesProtocol + id: e48d74a1-3ed9-4063-b970-fa95601ce813 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 907 + speciesSurveyCode: ALPHGLA + weightEnabled: true +- !SpeciesProtocol + id: bedf43f2-1ba4-404e-ada2-cdd5c66e67b3 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 886 + speciesSurveyCode: CHLOGRA + weightEnabled: true +- !SpeciesProtocol + id: 99d3c435-ce9e-48f2-a2e5-de1e30af1c05 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 931 + speciesSurveyCode: CRANSPP + weightEnabled: true +- !SpeciesProtocol + id: 6b2491d8-d237-489c-b98a-460594276fec + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 990 + speciesSurveyCode: DARDSPP + weightEnabled: true +- !SpeciesProtocol + id: cab84c60-0637-49b8-880e-74bf53fe8de8 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1140 + speciesSurveyCode: DORILAN + weightEnabled: true +- !SpeciesProtocol + id: ce1dc3a2-912b-439b-8930-83c6bb5a9112 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1012 + speciesSurveyCode: GALADIS + weightEnabled: true +- !SpeciesProtocol + id: ddfe6e29-03e4-4387-b052-a698f5087bf2 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1013 + speciesSurveyCode: GALAINT + weightEnabled: true +- !SpeciesProtocol + id: fe7f5f8d-bfac-4ae9-8e9e-3abed1c6aa1e + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1014 + speciesSurveyCode: GALANEX + weightEnabled: true +- !SpeciesProtocol + id: 03fd6fe9-9e9b-409e-96bf-57caa9e9419a + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1103 + speciesSurveyCode: GONERHO + weightEnabled: true +- !SpeciesProtocol + id: fb000dfa-157d-42d8-affe-3585b21addb0 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 951 + speciesSurveyCode: HOMAVUL + weightEnabled: true +- !SpeciesProtocol + id: 6e3a1545-86ff-41f7-ab1a-892c60e12a55 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1029 + speciesSurveyCode: HOMOBAR + weightEnabled: true +- !SpeciesProtocol + id: 6c61c141-d7de-4201-8291-53bfd17f856f + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1129 + speciesSurveyCode: INACSPP + weightEnabled: true +- !SpeciesProtocol + id: 6f594c41-c44a-4d26-a76a-a54ec9368862 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1136 + speciesSurveyCode: MACRSPP + weightEnabled: true +- !SpeciesProtocol + id: 50e66761-7754-4c68-bd89-b2a4a8749421 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1111 + speciesSurveyCode: MAJASQU + weightEnabled: true +- !SpeciesProtocol + id: c4fc0b86-0848-49b1-b150-8f2bf4ca2034 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1067 + speciesSurveyCode: MCPIDEP + weightEnabled: true +- !SpeciesProtocol + id: 242174d3-8ca9-4cf9-b8b9-21316ffa5a93 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1066 + speciesSurveyCode: MCPITUB + weightEnabled: true +- !SpeciesProtocol + id: a3915c98-71ec-4561-8673-95933e8edf70 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1075 + speciesSurveyCode: MCPIVER + weightEnabled: true +- !SpeciesProtocol + id: ac3f2c25-fc67-4820-95a2-1de26faf840c + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1015 + speciesSurveyCode: MUNISPP + weightEnabled: true +- !SpeciesProtocol + id: 83bf86a4-810d-4c9b-8dcb-37c66735b33c + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 999 + speciesSurveyCode: PAGUEXC + weightEnabled: true +- !SpeciesProtocol + id: 2c53f5e8-688b-4766-8b22-d62d92109f8a + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 994 + speciesSurveyCode: PAGUPRI + weightEnabled: true +- !SpeciesProtocol + id: baafb7ef-164c-4b98-975c-28c518a7315a + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 997 + speciesSurveyCode: PAGUSPP + weightEnabled: true +- !SpeciesProtocol + id: e26e4708-50e8-4947-b395-18dbd51e25fb + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 885 + speciesSurveyCode: PAPANAR + weightEnabled: true +- !SpeciesProtocol + id: c4b0705b-5657-480e-ad6b-4d6327de8073 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 1028 + speciesSurveyCode: PAROCUV + weightEnabled: true +- !SpeciesProtocol + id: 33b8eb55-932c-488a-8de9-d4696a485c21 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 868 + speciesSurveyCode: PASISIV + weightEnabled: true +- !SpeciesProtocol + id: 2e4c871c-d943-4dff-8d8d-a23bf39f8482 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 866 + speciesSurveyCode: PASISPP + weightEnabled: true +- !SpeciesProtocol + id: 423733e0-43c8-48ef-b6b9-b0077b8a03ae + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 880 + speciesSurveyCode: PLESACA + weightEnabled: true +- !SpeciesProtocol + id: 2cc65b6e-4f4d-4757-aa89-40dd52f13f3c + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 881 + speciesSurveyCode: PLESANT + weightEnabled: true +- !SpeciesProtocol + id: 99805344-1325-4139-b3dd-f6e4690b5316 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 7185 + speciesSurveyCode: PLESEDW + weightEnabled: true +- !SpeciesProtocol + id: 6aa66a07-fcd1-4fdf-aec9-29ce15c595f9 + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 882 + speciesSurveyCode: PLESGIG + weightEnabled: true +- !SpeciesProtocol + id: fe2af1be-2d65-4658-b587-49f22d4b939f + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 883 + speciesSurveyCode: PLESHET + weightEnabled: true +- !SpeciesProtocol + id: 5fde324e-f7a1-4516-9190-7eaf2239c69b + countIfNoFrequencyEnabled: true + mandatorySampleCategoryId: [] + speciesReferenceTaxonId: 884 + speciesSurveyCode: PLESMAR + weightEnabled: true +- !SpeciesProtocol + id: 8a8129f5-f66a-4057-8282-6c6287e80629 + 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